Hemitrygon akajei (red stingray): 140737333
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Entry
140737333 CDS
T11019
Name
(RefSeq) BRD4-interacting chromatin-remodeling complex-associated protein-like isoform X1
KO
K25612
BRD4-interacting chromatin-remodeling complex-associated protein
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140737333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
haka03036
]
140737333
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
140737333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLTSCR1
GtgE
Motif
Other DBs
NCBI-GeneID:
140737333
NCBI-ProteinID:
XP_072919870
LinkDB
All DBs
Position
12:104840423..105002039
Genome browser
AA seq
1678 aa
AA seq
DB search
MMSAHAVDMDDEDGRCLLDVICDPQALNDFLHGSDQLDGEDLLDTTTDPASAFFTDASLN
VQDATVNHLNSGHTQGSSSAVDLDFLEDEILGPPSGSNLQNSEQPCDILQQSLQEANITE
QSLEEDADLDIASLHFPSLQPASQSADGGQLFPAGADLIGLPQQPAPPPPVLAQQALIQP
QALGGQVVNKAISLQPFLQQVGLGNVTLQPLPNGSPSGALGISQIQVVGQLSSQPLMAIN
QPGQQVIAKAGQPAQVGGVPGVSYISSPAPESQPPPQPGVALPSSGVSPPSAGLVLQKAS
GPATLNGNSLFAGASGGVTRPSPSPAVMQAQSVVVQRTPTPIQPKPSTGLVQHKLFQISS
KPFTVQAEAPPSLQQQQQSHQPPQQPPPPPKAQQNLTFMASKPAQSVVFSASGAAFPQTI
PSTVFKPQQTAQPAAFGKPLSLHVQGGSIVIQPQQVPQAMLQGQSQFLLQGQLPSGHSLS
LPQSLPALQPSVGGQLLGAQPSATHIIANQTLPAHILSGQGLAGQLSLGQVIAAQGAHGA
THILSAPIHLQPSPVGQPALFQMPVSLGSQSQASAPAVIQGVTLPGQAGAAASAVLGPGE
APVSASAAQQGPGGLVALGNGQTSLLAVQAASAPAPPSHVQTHSQAGSSNSVALPVPAGK
VVITQQGSGPAVGQDNAQVFFQQQEEKQQQLYQAALKLQQERGLNQPPPHSLAPTVTTSS
VPASVIVSSSVGLAAAGTPDSKGQAVLPALAGSHFQQTLAGQQMAAGQQKTAMAQGTPTS
QSPVPQAPQNDAQVHIQLPSPHQSRPPSQPQPLSRPPSRPQSRPPSQPQVLSRPPSEPLS
RSCTPSQPPLYIIQTQLQGSPHGSSQPPHPMRPPSQPPLQVPFQGGGPPHPAEPQLTPPA
PAPQQQQQPGGQGQTPAEAQTPPRLLPPSQSPGDPQPPPLQLQLHCQPHPQGPLQPVYQT
LTLTAEQQQRFQMVTNQLQNMSAIPNPTQQHKSFMEKLQQMQHNIILQAKPSSSSQGVTG
VSQLSSQVQSPSLQTQAHTNSAGLKPQPTGGGPAALATLLQQTSVLVKASSAGTTATTRS
PDSKVISGAASGAPCLLQQGATVPLQMKPLTTHQVQPSLQTKPGVISSISGLNMNLSKGP
IQIQLLGKGLTQLVPAASVPAHQMDSKLGGLKTAASLQTAKESVLLDRLRMDQDTVLQPD
YKSPFRSYQDMVHRLLPYHLYQGTLPSVEEHRKVDEEFEAVSTQLLKRTQAMLHKYRMLL
FEEARRLSPSAEMVMIDRMFIQEEKTSLSTDKQLAKEKPDEYVASSSRSHNLTTSSSPPL
CTTTASLEAPRLPSVQSATPLHPTKLVIKHAGGSPSVSWARVPPPQDGDDDTLRARSRPP
PIKTYEARSRIGLKLKIKQEAGLSKVVHNTALDPVHQPASSVTPGAECPAATVRQMNGSL
EHSSPSPTSANLCKLPPRRSPREGGTPLPSDRTAADPSPPPPVAPPKPEDSRREGPPRGE
APARSVIASCKPRTARGSRPETDSRKSRTHTHPPPPAVASAGAQPEELPGGKAADGMDGL
AGVQGELVRGILKAEPPDGSWELALPPPKRTKSESLDMDNASFSSDSPQDDTLTEHLQSA
IDSILNLRQPQSSLAQNPVSSPYHSSEINSSPFSPAPHPDSYLAPNRNGGLGARTYTR
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgctcatgcagttgacatggatgatgaagatggacgatgtctgctagatgta
atttgtgacccccaggctctcaatgacttcttgcacggttcagaccagcttgacggtgaa
gatctcctcgacacaaccacagacccggccagcgctttcttcactgatgcatctctcaat
gtccaggatgcgacagtgaaccacctgaacagcgggcacacacagggctcctccagcgca
gttgacctcgacttcctggaagatgagatcctggggccgccgtccggctcgaacctgcag
aactctgagcagccttgcgacatcctgcagcagagccttcaggaggccaacatcacggag
cagtcgctggaggaggatgccgacctggacatcgcctcgttgcacttcccctcgctgcag
ccggcgtcccagtcggccgatggcggccaactcttccccgctggcgccgacctgattggc
ctgccgcagcagccggcccctccgcctcccgtcttggcccagcaggccctcatccagccg
caggccctggggggccaggtggtgaacaaggccatcagcctgcagcccttccttcagcag
gtggggctgggcaacgtgacgctacagccgctgcccaacgggagcccctcgggggctctg
ggcatcagccagatccaggtggtgggccagctgtccagtcagccgctgatggctatcaac
cagcccgggcagcaggtcatcgccaaggccggtcagcccgcgcaggtgggcggtgtgccg
ggggtcagctacatctcttcacccgcccccgagtctcagccgccacctcagccaggagtg
gccctcccctcatctggagtgtccccacccagcgccggcctggtcctgcagaaggcctcg
ggcccagccaccctcaacggcaactcgctgtttgccggggcctccggcggggtgaccaga
cccagccccagcccggccgtgatgcaggcccagagtgtggtggtccagcgcacccccacc
cccatccagcccaagcccagcacaggcctggtgcagcacaagctcttccagatcagctca
aagcccttcaccgtgcaggccgaggctcccccctcgctgcagcagcagcagcagtcgcac
cagcccccacagcagcccccaccgccacccaaggcccagcagaacctgaccttcatggca
agcaagccagcccagagcgtggtcttctcggcttcaggggcagccttcccccaaaccatc
ccctcgaccgtcttcaagccccagcagaccgcccagcctgccgccttcggcaagcccctc
agcctgcacgtgcaggggggcagcatcgtcatccagccccagcaggttccacaggccatg
ctgcagggccagagccagttcctgctgcaggggcagctaccttccggccacagcctgtcc
ctgccccagtccctgcctgccctgcagcctagtgtggggggccagctgctgggcgcccag
ccctctgccacccacatcatcgccaaccagaccctgccggcccacatcctgagtgggcag
ggcctggcaggccagctgagcctgggccaggtcatcgctgcccagggagcccacggggcc
acccacattctctccgcccccatccatctgcagcccagcccagtggggcagccagccctc
ttccagatgcctgtgtcactcgggtcacagagccaggcctcggcgcccgccgtcatccag
ggcgtgaccctgccggggcaagcaggggcagctgcgtcggccgtgctgggcccaggggag
gcacctgtctcggccagcgctgcccagcagggtcccggtggcctggttgctctgggcaac
gggcagacctcactgctggcggtgcaggctgcctctgcccccgctcccccttcgcacgtc
cagacacactcgcaggccggcagcagcaactcggttgccctccctgtcccagccgggaag
gtcgtcatcacccagcaaggctcggggcctgctgtcggacaggacaacgcccaggtcttc
ttccagcagcaggaagagaagcaacagcagctttaccaggcagccctcaaacttcagcag
gagcgaggcttgaaccagccgccaccccacagcttagcgccaaccgtcaccaccagcagt
gtgccagcctccgtgattgtcagcagtagcgtggggctggcggccgccggaaccccagac
tccaagggacaagcggtgctgcccgctttggcgggctctcacttccagcagactctggct
ggtcagcagatggctgctgggcagcagaagacggcgatggcccagggcacacccacctcg
caatcgcctgtgcctcaggccccacagaacgacgcccaggtccacatccagctgccgtcc
ccccaccagtcccgtccaccctcccagccgcagcctctgtcccggcccccatcgcggccc
cagagccgccctccttcccagccccaggtgctatcccgacccccttccgagcctctctcc
cgatcctgcaccccttcccagccgcccctctacatcatccagacccagttgcagggctcc
ccccacgggagctcccagccgccccaccccatgagacccccgtcccagccgcccctgcag
gtgccgttccagggcggcgggcccccccacccggctgagccacagttgaccccaccagct
cccgcgccccagcaacagcagcagcccggtggccaaggccagaccccagctgaggcccag
accccaccccgcctcctgcccccctcgcagagtccgggtgacccccagcccccacccctg
cagctacagctccactgccaaccccaccctcagggccctctgcagcctgtctaccagacc
ctcaccctgacagcagaacagcagcaacggttccagatggtgaccaaccaacttcagaac
atgtccgccatccccaaccccacccagcagcacaagtcgttcatggagaagcttcagcag
atgcagcacaacataatccttcaagccaagccctcgagcagcagccaaggcgtgactggc
gtcagccagctcagcagccaagtgcagtcgcccagcctgcagacgcaggcgcacaccaac
tcggccgggctgaagccacagcctaccggaggaggcccggcggctctggccacactcctg
cagcagacgtccgtcctcgtgaaggcatcttcagcaggcaccacggccacgacacgatct
ccggacagcaaggtcatctcaggggctgcgtctggagccccctgcctccttcagcaagga
gcgacagtccccctgcagatgaagcctctcacgacgcaccaggttcagccctcgctacag
acgaaacctggagtgatcagttcaatctcgggtctgaacatgaacttgtccaaagggccg
attcaaatccaactcctcgggaaagggttgacgcagctggtgcctgccgcttccgttcct
gctcatcagatggacagtaaattgggaggattgaagacagcagcgtctcttcagacggca
aaggaatctgtgctcctggaccgactgcgaatggatcaggacacggttctccagccggac
tacaagtcccccttccgatcttaccaggacatggtccacaggctactgccataccacctg
taccagggaacgttaccctctgtggaagaacacaggaaagtggacgaggagtttgaggcg
gtctcaacccagttattgaaaagaacccaggcgatgctacacaaatacaggatgctgctc
ttcgaggaggccaggaggctgagtccctcggcggagatggtgatgattgacaggatgttt
atccaggaagagaaaacgtccctctccacggataagcagttggcgaaggagaaacctgat
gaatacgtggcctcatcgtccagatcgcacaatcttactacctcttcatctccgcccctc
tgcaccacgacagcctcgctggaagccccccggcttccgtctgtgcagagcgcgacgccc
ctgcaccccaccaagctggtgatcaagcacgcggggggctctccctcggtgtcgtgggca
cgggtcccacccccccaggacggagacgacgacaccctgcgagctcgcagccggccgccc
cccatcaagacctacgaggccaggagccgcatcggcctgaagctgaagattaagcaggag
gccgggctgagcaaggtggtgcacaacacggcgctggaccccgtgcaccagcccgccagc
tccgtcactcctggggccgaatgtccggcggccacggtgcgccagatgaacgggagcctg
gagcactcctccccgtcacccacctcggccaacctctgcaagctgccgcccaggaggagc
cctcgggaaggcggaacgcctctcccctctgaccggactgcggcagacccctcaccaccg
ccgccggtagcacccccgaagccggaggacagcaggagggagggaccgcccaggggagag
gcgccggccaggagcgtgatcgccagctgtaagcccaggactgcccgggggagcaggccg
gagacggacagcaggaagtctcggacacacacacatcctcccccgcccgctgtggcttct
gccggtgcccagccggaggagctccccggggggaaggcggcagacggcatggacgggctg
gccggcgtccagggagagctggtacgtggcattctgaaagcggagccccccgacggctcc
tgggagctcgccctcccaccccccaagaggaccaagtcagagtcgttagacatggacaac
gccagcttctccagcgacagccctcaggacgacaccctgaccgaacacttgcagagtgcc
atcgacagcatcctgaacctgcggcagccacagtcgtctctcgctcagaaccccgtctcg
tctccctaccactcctcggagatcaactcctcgcccttctctcccgccccgcaccccgac
agctaccttgcccccaatcgcaacggaggcctcggagcgaggacttacaccagatga
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