Hemitrygon akajei (red stingray): 140737745
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Entry
140737745 CDS
T11019
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04137
Mitophagy - animal
haka04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
140737745 (vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
140737745 (vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haka03019
]
140737745 (vcp)
03009 Ribosome biogenesis [BR:
haka03009
]
140737745 (vcp)
04131 Membrane trafficking [BR:
haka04131
]
140737745 (vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
haka04147
]
140737745 (vcp)
Messenger RNA biogenesis [BR:
haka03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
140737745 (vcp)
Ribosome biogenesis [BR:
haka03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
140737745 (vcp)
Membrane trafficking [BR:
haka04131
]
SNARE
SNARE associated proteins
Others
140737745 (vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
140737745 (vcp)
Exosome [BR:
haka04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
140737745 (vcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
Vps4_C
RNA_helicase
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
Viral_helicase1
NACHT
Sigma54_activat
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
140737745
NCBI-ProteinID:
XP_072920447
LinkDB
All DBs
Position
13:complement(31833970..31874344)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKSDDLSTAILKQKHRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDIVSIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDVIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRGAILKAN
LRKSPIAKEVDLEYLAKTTNGFSGADLTEICQRACKLAIRESIESEIRRERERQGNPSAM
EVEEDDPVPEIRKDHFEEAMRYARRSVSDNDIRKYEMFAQTLQQSRGFGSCRFPSSSQPG
AGPSQGTGGGSGGNMFSEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgggaggagagtctaaatctgatgatttatcaactgctattctgaagcagaag
catcgacctaatagattaattgttgatgaagcaattaatgaagacaacagtgtggtttca
ctgtctcaggcaaagatggatgaacttcagttattcaggggagatacggtattgctaaaa
ggaaagaagagaagagagacagtttgtattgttctgtcagatgatacatgctccgatgaa
aaagttcgcatgaacagggttgtgcgcaacaacttgagagttagactgggtgacattgta
agcattcagccatgcccagatgtaaaatatggcaaacgaatccatgtacttcccattgat
gacacagttgagggtattactggaaacttatttgaagtctatctcaaaccctatttcttg
gaagcttataggccaataagaaaaggtgatattttcttggttcgtggtggaatgcgtgct
gtggaattcaaagtagtggaaactgatccaagcccatactgtatagttgctccagacact
gtaatccactgtgagggtgaacccatcaagcgcgaggatgaggaagaatctttgaatgaa
gttggttatgatgatattggtggatgcagaaaacagcttgctcagatcaaggagatggtt
gagctgcctcttcggcatcctgcactgttcaaagctattggtgtcaagcctccacgaggt
attctcttgtatgggccccctggaactggcaagaccttaattgctcgtgcagtggcaaat
gaaactggtgcatttttcttccttatcaatggacctgagattatgagcaaacttgcagga
gaatcagagagcaatctgagaaaagcattcgaagaggctgagaaaaatgctcctgctatc
atttttattgatgaactagatgctattgctccaaagagagagaagactcatggcgaagtg
gaacgtcgcattgtgtcacaactcctcaccttgatggatggtttgaaacaacgtgctcat
gtaattgttatggcagctacaaatcggccaaacagcattgatcctgctcttagaagattt
ggacggttcgatagagaggtggacattggtattcctgatgccacaggtcgattggaaatc
ctgcagattcacacaaagaacatgaaattggcagatgatgtagaccttgagcaggttgct
aatgaaactcatggccatgttggagctgatttggctgccttatgttcggaagctgctctt
caggctattagaaagaagatggatgttatagatctggaagatgagaccattgatgctgaa
gttatgaattcacttgctgttactatggatgatttcaggtgggctttgagccagagcaat
ccttcagcactgcgcgaaactgtggtagaagtgcctcaagtaacgtgggaagacattggt
ggattagatgatgtgaagagagagctacaggaacttgtacaatatcctgttgagcatcct
gacaagttcctgaagtttggcatgaccccttcaaaaggtgtactattctatggcccacct
ggttgtggtaaaaccttgctggcaaaagccattgctaatgaatgccaggccaactttatc
tcaatcaaaggaccagagctgcttaccatgtggtttggcgaatcagaagctaatgtccga
gaaatatttgataaggcacgtcaggctgccccttgtgtgttattctttgatgaacttgat
tccattgctaaggctcgaggtgggaatataggtgatggtggtggtgctgctgatcgtgtc
atcaatcagatcctgacagaaatggatggtatgtctaccaagaagaatgtctttatcatt
ggtgctaccaaccgccctgatattattgatccggcaattttgcgccctgggcgccttgat
caactgatttacatcccattgcctgatgaaaaatctcgtggggctattctaaaagctaac
ttgaggaagtctcctattgctaaggaagtagacttggagtatttagcaaagaccaccaat
ggattttcaggagctgacttgactgagatctgtcaacgagcttgtaagcttgcaatcaga
gaatctatagaaagtgagatcagacgtgaacgtgaaagacagggtaacccttcagcaatg
gaggttgaagaagatgatccagttcctgaaatacgcaaagatcatttcgaggaagctatg
cgttatgcacgtcgatctgtcagtgacaatgacattcgaaaatatgaaatgttcgcgcaa
acactgcagcagagccgtggatttggcagttgcagattcccatctagtagccaacctgga
gcaggaccaagtcaaggaactggaggtggaagtggtggaaacatgtttagtgaagacaat
gatgatgatctgtatggttaa
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