Hemitrygon akajei (red stingray): 140737766
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Entry
140737766 CDS
T11019
Name
(RefSeq) integrin alpha-2-like isoform X1
KO
K06481
integrin alpha 2
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03271
Virion - Rotavirus
haka04145
Phagosome
haka04510
Focal adhesion
haka04512
ECM-receptor interaction
haka04810
Regulation of actin cytoskeleton
haka04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
140737766
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
140737766
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
140737766
09144 Cellular community - eukaryotes
04510 Focal adhesion
140737766
09142 Cell motility
04820 Cytoskeleton in muscle cells
140737766
04810 Regulation of actin cytoskeleton
140737766
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
haka04147
]
140737766
04515 Cell adhesion molecules [BR:
haka04515
]
140737766
04090 CD molecules [BR:
haka04090
]
140737766
Exosome [BR:
haka04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
140737766
Exosomal proteins of bladder cancer cells
140737766
Cell adhesion molecules [BR:
haka04515
]
Integrins
Integrin alpha subunits
140737766
CD molecules [BR:
haka04090
]
Proteins
140737766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
ITGAX-like_Ig_3
FG-GAP_2
FG-GAP_3
Integrin_alpha
DUF2897
Motif
Other DBs
NCBI-GeneID:
140737766
NCBI-ProteinID:
XP_072920496
LinkDB
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Position
13:36761314..36929187
Genome browser
AA seq
1183 aa
AA seq
DB search
MDLNACCFLLLVQGLLQLSQGFNIDVMKAQMFSGPPDVLFGTSIQQFSNPDGQWLLVGAP
WNGFPENRMGDVYKCPVSGNSASCEKLSLGDKMNFPNVTEIKQNMSAGATLVRNDETGGF
LVCAPLWAQKCGRLYYPTGLCTDVNSNFQISKTFSPAIQSCTSAMDLVIVLDGSNSIWPW
QPVQNFLKKLTGSLDVGPKKTQVSIVQYGEDAIINFKLNAYKTTAEVERVAAHITQKQGQ
ETNTAGGIEYARKYAFSPENGGRPSATKVMVVVTDGESHDSAKLPKVIAQCKEDRIIRFG
IAVLGYYNREGINPDNLIKEIKSIASLPTDKHFFNVSSENALIEIASVLKERIFSIEGTS
NKNEETFLLEMAEVGFSAHVVPSQDLLILGAVGAYDWSGTTVHKSSAKTTIFSKKVFQDI
LQDRNDSSYLGYAVTSLVTPDSVLYVAGAPRFQHTGQIVIYAVGLNDKVVIKQTQKGEQL
GSYFGSVLCAIDVNQDSLTDVLLVGSPMFMGPHKNEEGRVYMFNVNKQGNLEKNGILEGP
DNGRNNRFGAAIAAVSDINLDGYHDVAVGAPVEDDNNGAVYIYNGYQKLIKPKYTQKILA
STISSKLQYFGLSIDGQKDLNGDAITDLSIGSIGNVVQLWSRSIANVSVTVIFEPTKLSL
LNKSCIINGNNHICDKIKICFQATIKPEKSGSSIDIRYKLTLDADLKSSRVSSRGLFQEN
HDREINQYITVGNSLKCNDLMFYVQDAGDIVNPIDVRLDFGPRVLEAGPSLDVYTARSRQ
FSIPFSKDCGDDEECVTDLVIKVHVINPSSRMVPYIVSSKNKRITINVETENKKENAFNA
KVKIQFSKNIFFSSVDTSAVSCLIVDPQSISCDIGHPFLRGGDKVSFVINFDFNFNEPKR
DTYIVFHAVSESIEKPETVSDNTKRVDFKVQYDAEVLFSRASNMHFYEINPDKQVPQVIK
DFKDIGPEYAIILKVNTGQFPIQTVYVTVKIPISTKDRSQLLYLTGVKTIPESNFICDLK
EKVDKLNIKQSPYSANFIEEHLENVKDLNCENANCENFVCTINNLGKNREYSINIFTRIW
EGTFIRASFQSISLTPSAQIATDKQLLVIKNNTLTIPVTLIKPVEKKDVPTAVIVGSIIG
GLLVLLALVAALWKLGFFKRKYNKLAKDEEDNDDNVNDDPAEE
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggatctcaacgcatgttgtttcttgctccttgtccaaggtcttcttcagctatcccaa
ggatttaacattgatgtgatgaaagcccaaatgttttcaggcccgccagatgttctcttt
ggcacctcaattcagcagttctcaaacccggatggtcaatggttgctagtaggagcccca
tggaatggatttccagagaatcgcatgggagatgtctataaatgtccagtcagtggcaac
agtgcaagttgtgagaaacttagcttgggagataaaatgaattttccaaatgtgacagag
atcaaacagaacatgagtgctggtgccacacttgtcaggaatgatgaaacgggtggattt
ttggtgtgtgctccattatgggcgcagaagtgtggcaggctgtattatccaacaggattg
tgcacagacgttaattcaaatttccaaatatcaaaaaccttctcgcctgctattcaatct
tgtacatcagccatggatcttgtaatagtgctggacggatccaacagtatctggccgtgg
caaccagtccaaaacttccttaaaaaattaacaggaagcttagatgttggtcctaagaaa
actcaggtgtccattgtacaatatggtgaagatgcaataattaatttcaagttgaatgct
tacaaaacaacagctgaagtcgaaagggttgctgcacatatcactcaaaagcaaggacaa
gaaacaaacactgctggtggaattgagtacgcaaggaaatatgcattctctcctgaaaat
ggtggacgaccatcggcaacaaaggtcatggttgttgtaactgatggtgaatctcatgac
agtgccaagttaccaaaagtgatcgctcaatgtaaagaagaccgaataatcagatttgga
attgctgttctaggttattacaatagagaagggataaacccagacaacttgatcaaggaa
atcaagtctattgcaagtttgccaacagacaaacattttttcaatgtatcttcagaaaat
gccttgattgaaatagctagtgtgcttaaagaacgaatctttagtattgaaggtaccagc
aataagaatgaagaaaccttccttttggaaatggcagaagttgggttcagtgcacatgtt
gtacctagccaggacttactgatactgggagcagtgggagcttatgattggtcaggtaca
actgtccataagtcatctgccaagactactatattttccaagaaagtctttcaggacatc
ttgcaagacagaaatgacagttcatatttaggctacgcggtgacatcactagtaacacca
gattccgtgctctatgttgctggagcaccacgctttcaacacactggtcagatagttatt
tatgcagtgggattaaatgacaaagtggtgattaagcagacgcaaaaaggagaacagctt
ggctcgtattttggcagtgtactatgtgctatagacgttaatcaagactccctgacggat
gttctgttagttgggtcccctatgtttatgggtccacacaaaaatgaggaaggaagagta
tatatgtttaatgtcaataagcagggaaatctggaaaagaacggcatcttagaaggacca
gataatggaagaaacaatcgatttggagctgctattgctgctgtctctgatatcaatctg
gatggttaccatgatgtagcagtcggagcacctgtggaagatgacaataatggtgctgtt
tatatttacaatggctatcagaagttaatcaaaccaaaatatacgcaaaaaatactggct
tcaacaatcagctcaaaactgcaatatttcgggctatctatcgatgggcagaaggatttg
aatggtgatgctatcacagatctgtcaattggatccattgggaatgttgtacaactttgg
tcaaggagtattgcaaatgtaagtgttacagtaatatttgaaccaacaaaactctccctg
ttgaacaaatcctgtataatcaatggaaataatcatatctgtgacaaaatcaaaatatgc
ttccaagctacaattaaacctgaaaaatctggatcatcaattgatattaggtataagcta
acactggatgctgatctcaagtcatctcgtgttagttcacgaggattatttcaagaaaac
catgaccgggaaataaatcagtacattacagttgggaactcactaaaatgtaatgatctc
atgttttatgtccaggatgctggagatattgttaatccaattgatgtgcggttagacttt
ggtccacgagtgcttgaagctgggccctctcttgatgtctacacagcaagatccaggcag
ttttctattccattctccaaagactgtggtgatgatgaagaatgcgtaactgatcttgta
attaaagttcatgtgattaaccccagcagcagaatggtgccatatatcgttagcagcaag
aacaaacggataacgattaatgtagaaacagagaacaaaaaggaaaatgcatttaatgct
aaagtcaagatacagttttctaaaaacatctttttttcatcagtcgatacttctgcagtt
tcatgtttgattgtggaccctcagtcaatatcttgtgacattgggcacccatttctgcga
ggaggagataaggtatcttttgttatcaattttgacttcaattttaatgaaccaaagagg
gatacatacattgtcttccatgctgtaagtgagagtattgaaaaaccagaaactgtttct
gacaatacaaagagagttgattttaaggtgcagtacgatgctgaagttctcttctcaaga
gccagcaacatgcatttctatgaaatcaatcctgataaacaggttccacaagtaatcaaa
gacttcaaggatattggtccagaatatgctattatcctcaaagtcaatactggacaattc
cctattcagacagtctatgttactgttaagataccaatatccacaaaagacagaagtcaa
cttttgtatctcactggagtaaagacaattccggaaagcaacttcatttgtgacttaaaa
gaaaaagtggataaactgaatatcaaacagtcaccttattctgcaaattttatagaagaa
caccttgagaatgtgaaagatttgaactgtgaaaatgccaattgtgaaaattttgtttgc
acaatcaacaatcttggaaagaacagagaatattcaatcaatatttttacaagaatctgg
gagggcacatttataagagcctcctttcaaagcatatcgttgactccatctgcacagatt
gcaacagacaagcaattattggtcatcaaaaataatacattaacaatcccagttacatta
atcaaacctgtagaaaaaaaagatgttcccacagcagtgattgtgggaagcatcattggt
ggattacttgtacttctagctctcgttgctgccctatggaaacttggattctttaaaaga
aaatacaataaactggcaaaggatgaagaggataatgatgacaatgtcaatgatgatcct
gctgaagaataa
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