Hemitrygon akajei (red stingray): 140738295
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Entry
140738295 CDS
T11019
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haka03021
]
140738295
Transcription machinery [BR:
haka03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
140738295
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
140738295
NCBI-ProteinID:
XP_072921574
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Position
14:11206543..11413902
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AA seq
2211 aa
AA seq
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MTAANWVANGASLEDCHSNLFSLAELTGIKWRRYSFQGLGGCGPIISAPAQDDPILQTFI
RCLQANLLCVWRRDVRPEAKELWIYWWGEEPNLVDIIHHELRVVDAGLWENGLTYECRTL
LFKAIHNLLERCLMEKNFVRIGKWFVKPYEKNEKSVNKSEHLSCSFTFFLHGESNVCTSV
EIAQHQPVYHITEEHINLALSSAMPCQVIISPFGLNGTLTGQTYKMSDPATRKLIEEWQY
FYPMVLKKKEIKEEEEMDCDDDFPVAVEVIVGGVRMVYPSAFVLIPQGDIPIISNAATAG
GHTNPTQGPGSVKDTNSCGLPLTPPTSPEQTIIAGDGILHAVVSHVSGQEGAVNSTSPKH
SGEIPPKVTNEMVQKVWKECNLNKAQLKRHSTSENSEEELANNSAAWDFTEPGQRVNCSC
SRQKLLKQRSATGTNRPPSISQPGFNTGLPCASLPSSASSKHKTNEKQEKGDKQQKRPMT
PFHHRLSLTDELCMEQDPTGQKLGLVGIDVPLEMQNNRKYGKPASGPPGNQSKPLNLNPM
DSPHSPISPLPPTLSPQPRGPEAEGLDGAPVPINPLLYSNGLELQAIPSLDDKTGLLSQR
LPPVPEVSETTLYNGITAQNLESSGKISWQCYKTLSWAEREFRPPELHCDRCDSKLDNPD
GSALRRLLAQPHKRFKVSEERRQVHIQEINYLDPTRLMQQHSEGPGELNDPYTFVDGDIE
YSFTSIKKFKLGSEKDATKKSQQNKLEDGFGTREAAPTHATQLPDGKDAMSIFSTAPKSE
TRQSPTGRTVPASLTRETDLVVSLNDLDNLFDNSDDEENGTASPTRSKPANAGSEDRTVG
KDVKTAGPYPPTVADLQRMFPTPPSLEQHPAFSPVMNYKDGVNSEMVAGINSVENPVSSV
TTAQFTEFKMEVEDGLGSPKPEELTDFSFVHKPPKAKAFVGSSMFAPLKAVPSQCLAPLK
IPDACIYRPSWAVPPKIEQLPVPSSASLIRDGYVNVPSVGSLTEDYIQMSTPQMSTPLAV
SSTAPASNSGAGILPSPATPRFSVPTPRTPRTPRTPRGAGTASGQGSVKYDSADLCSPAS
TPSTTRPLNSVEPATIQSIPEAHSLYVTLILSDSVMNFFKDRNFDSCCICVCDTKGADVD
LYIPDPTNEAQNSCTCGFSAVVNRRLGYNAGLFLEDEFDIFGRTSEIGQAAERRLILCRN
SIEPQGFDGSKRPHDPTSSLIFLIQDQCTRPFTSLSSLDYISLDRSALQSANWNYDKLRA
DSSDSCTECFNALEQGRQYVDNPSGGRLDETLIRSGSLHPWPNSNVLDVSILSSQDVVRM
LLSLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKIGRGSYGSEESPEPLPIPTLLL
GYDKDFLMISPFALPFWEKLLLEPYGSQRDVAYIVVCPENEALLTGAKNFFRDLSAVYET
CRLGEHRPICKVLRDGIMRVGKSSAKKLADESVDDWFSQTWVNDESDNLAKLKLYAQVCR
HHLAPYLATLQLDNSLLIPPKHQPTASSGTQGQTTTGASGPSSGTGGTSAPVTTGTTVTS
TISTGSSTATTGSSGVGSGSTGTCCTSTSTTTTTTTTTTPVLHQTGTTSSTSGFSGTTSV
PSGSSGTNAERSQGSTPSTSGDSDAQNSAQQQEVQDSTTERDRIGIPTEPESADSNAYPP
AVVIYLVDPFTYSLDEESSFTSGSLLGLLRCYLAMLDNLPEHMRNAFTVQIVPCQYLLQP
VKDDHSFYIQHLKSLAFSVYTQCRRPLPTQIHIKSLTGFGPASTIEMTLRHSERPHPIQV
YSPPCILAPIKDKQTELGETFGEASQKYNVLFVGYCLSHDQRWLLASCTDLHGELLETCI
LNIDVPNRSRRSKVPVRKMSLQKLWEWCVGIMQMTSVPWRIVMGRLGRVGHGELKDWSIL
IGRRSLQSTSKQLKETCAMCGISAADSPTILSACLVALEPQGSFVVMPDAVTMGSVFGRG
TALNLQTSQLNTPQDASCTHILVFPTSAATVVANTEALEGLGNQDGIGILDEDIFAEDFD
NDIRILITGNLTSPDSPTGIGASSHFQHSSEAGRGQGGERLLSTEAHEEVANVLQQPLAL
GYFVSTAKAENLPQWFWSACPHAQNQCPLFLKASLHHHVSLAQSDELLPGKHTHPHPLDS
NRTSDVLRFVLEQYNALSWLNCNPATQDRQSCLPVHFVVLTQMYNAIMNLL
NT seq
6636 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagcaaactgggtggccaacggtgctagcttggaggactgccattcgaattta
ttctctctggctgaattaactggcatcaaatggcgtaggtacagtttccagggtcttggg
ggctgtggtcccatcatctcagcaccggctcaggatgatcctattttgcagacctttatt
agatgtctacaggccaatctactgtgtgtatggcgacgagatgtgagacctgaagccaag
gaattgtggatttactggtggggagaggagcctaatctggttgatataattcatcatgaa
ttacgagtggtagatgcgggtctctgggaaaatggactcacatacgaatgcagaacactg
ctctttaaggccattcataatttattagaaaggtgcctgatggaaaagaacttcgttagg
attggaaagtggtttgtcaaaccttatgagaaaaatgagaagtctgttaacaaaagtgag
cacctttcctgttccttcaccttctttctgcatggagagagcaatgtctgtacaagtgtt
gagattgctcaacaccaacctgtgtaccacatcactgaagagcacatcaatctagcacta
tcatcagccatgccttgtcaagtcatcattagtccatttggactaaatggcacacttaca
ggccaaacatacaagatgtcagatccagctacaaggaaattgatagaagaatggcagtac
ttctacccaatggtattaaagaaaaaagaaataaaggaggaagaagaaatggattgtgat
gatgacttccctgttgcagttgaggttattgttggtggtgtaagaatggtatatccgtca
gcttttgtgctgattcctcagggggatatccctataatttcaaatgctgctactgcagga
ggtcataccaatccaacgcaagggccaggaagtgtgaaagacaccaatagctgtggattg
ccacttacaccacccacctctcctgagcagaccataatagcaggtgatgggattttgcat
gctgttgtcagtcacgtgagtgggcaagaaggagctgtaaattctacaagcccgaagcat
tctggtgaaattcctccaaaagtaacaaatgagatggttcagaaagtctggaaggagtgc
aatttgaacaaggcacaactaaaaagacattcaactagtgaaaattctgaggaagagctg
gccaacaattctgcggcttgggattttacagaacctggccaaagagtcaattgttcttgt
tcaaggcagaagcttctaaagcagcgaagtgcaacaggcacaaaccgaccaccatccatt
tctcagcctggcttcaatactgggcttccttgtgcttccctgccatcatctgcctcctct
aagcacaagacaaatgagaagcaggaaaaaggagataaacagcagaaacggccaatgact
ccatttcatcatcgactgtcattaacagatgagctttgtatggaacaggatcctacggga
cagaagcttggattagttggtattgatgtccccttggaaatgcaaaacaataggaaatat
ggcaagccagcatctgggcctccaggaaaccagagcaagccacttaatttgaatcctatg
gattcaccacattctcccatctctcctcttccaccaactcttagcccccaaccaaggggt
ccagaagcagaaggtttggatggagctcctgtgcccatcaatccattgctgtacagtaat
ggcctggaacttcaggcaattcccagccttgatgataagactgggcttttatcacaaaga
ctaccaccagtgccagaagtcagcgagacaactttatataatggtatcactgcacaaaat
ttggagtcttcaggcaaaatctcatggcagtgttacaaaactctttcctgggcagaaaga
gagttcagaccaccagaactgcactgtgacagatgtgatagcaagttggataatccagat
ggttcagcactaagacgacttctagcacaacctcataaacggttcaaggtttctgaagaa
aggagacaggtacacattcaggaaatcaattacctggacccaactagactaatgcagcag
catagtgaaggtccaggggaacttaatgacccttatacttttgtggacggtgacattgaa
tacagctttacttccattaaaaaatttaaattgggctccgagaaagatgcaaccaagaaa
tcgcaacagaataagctagaagatggatttggtactagggaagctgcacctacgcatgcc
acacagttgccggatggaaaagatgccatgtctatttttagcactgctccaaaatcagaa
actcggcaatctccaaccgggcggacggtacctgcaagcctcactagggaaactgatctg
gtggtgtctttgaatgacctggacaatctttttgacaactctgatgatgaggagaatgga
acggcttctccaacacgatctaaaccagcaaatgcagggtcagaagatcggacagttggc
aaagatgtgaagactgcagggccttatcctccaactgttgctgatctgcaaagaatgttt
ccaacccctccatctctggaacaacatccggcattctctccagtaatgaactacaaagat
ggtgttaattctgagatggttgcagggattaacagtgtggaaaatccagtgagcagtgta
actacagcccagttcactgaattcaaaatggaggtggaagatggattgggcagccctaag
cctgaagaactaacagatttctcttttgtacacaaaccaccaaaggcaaaagcttttgtt
gggtcttcaatgttcgcaccactgaaggcagtacccagtcaatgccttgcccctctgaaa
ataccagatgcctgcatatacagaccatcatgggctgttcctcctaaaattgaacagttg
cctgtaccatcatctgcttcattaattcgagatggatatgtcaacgtgcctagtgttggg
agtctgacagaagattatatacagatgagcactcctcagatgagcacaccattggcagta
agcagtactgcacctgcaagtaacagcggtgctggtatattgccatctccagcaacccca
cgcttttctgtccctacacctcgtacaccaagaacaccaaggactcctcgcggtgctggg
actgccagtgggcagggttcagtaaaatacgacagtgctgatctctgctctcctgcctca
acaccctcaacaacgcgaccattgaactcagtagagccagctaccatacagtcaattcca
gaagcgcacagcttgtatgtgacactaatcttatcagattcagtgatgaatttcttcaag
gatcgtaacttcgatagctgctgtatctgcgtttgtgataccaaaggggcagatgttgat
ttatacatcccagatccaaccaacgaagctcagaattcgtgcacctgtggatttagtgct
gtggtaaatcgcaggcttggatataatgcaggtctttttcttgaagatgaatttgatatt
tttggaaggacctctgaaattggtcaagctgcagaaagacggttgatactgtgtaggaat
tctatagaaccacaagggtttgatgggtctaagaggccacatgacccaacatcaagctta
atttttctcatacaggaccaatgtacaagacctttcacttctctaagttctttggattac
atttccttggatagatcagcacttcaatcagcaaactggaactatgacaagctgagagcc
gatagcagcgattcttgcacagagtgtttcaatgccctggagcagggtcggcagtatgtg
gataatccttcaggtggaagattagatgaaacactaattagaagtggaagtttacaccca
tggcccaatagtaacgttctggatgtaagcatcctttcatcccaagacgtcgtccgtatg
ctgctatcactgcagccttttctacaagatgccattcagaagaaacggacaggaaggaca
tgggaaaacatccaacatgtgcaaggacctctcacctggcaacagttccacaagataggc
agaggatcctatggttcagaagaatcaccagagcctcttcctatccctacactgctgctg
ggttatgataaagacttcctgatgatctccccctttgcactgcccttttgggagaagctg
cttctggaaccatatggttctcagcgtgacgtagcctacattgtggtttgtccagaaaat
gaggccttgctcactggagccaaaaatttcttcagggatcttagtgcagtatacgagacc
tgcagacttggtgagcatagacccatctgcaaagtattgagagatggaatcatgcgggtt
ggtaagagttctgcaaaaaagctggcggatgaatcagttgatgattggttctctcaaacc
tgggttaatgatgagagtgacaatcttgccaagttgaagctctatgctcaagtttgccgc
caccacttggcaccttacctggctacacttcagctggataacagcttgctgattccacca
aagcaccagccaactgcatcatctggcacccagggacagacgacaactggagctagtggg
ccatcatcaggaaccgggggtacttctgcaccagtgacaactggtacaacagttacttcc
acaatcagcactggcagtagcactgcaacaactggcagctctggtgtaggaagtgggtca
acagggacctgctgcacttctacctccaccactaccaccacaaccacgaccactaccccc
gttttgcatcagacaggaacaacctcatccacttcaggatttagtggtactacttcagtt
ccaagtggtagttcaggcactaacgcagagagatctcaagggagtacgcctagcacaagt
ggagattcagatgcccaaaactcagcacagcagcaggaagtgcaagacagtactacagaa
agagaccggataggaattccaacagaacccgagtcagctgacagcaatgcatatccccca
gctgtcgtcatttatcttgttgatccttttacctattccttagacgaagagtcatctttt
acaagtggatcattgctaggtctgttacggtgctacctggcgatgctggataatctgcca
gagcatatgaggaatgcattcactgtccagattgtgccttgccagtatctactacaacca
gtgaaagatgatcacagtttctatatacagcacttaaaatcactggcattttcagtttac
actcaatgcagacggccacttcccacacagatccacattaaatcactaactggctttggt
cctgcttccacaatagaaatgactcttaggcattcagagcgcccccaccctatccaagta
tactcacctccttgtatcttggcaccgatcaaggacaagcaaacagaactaggtgaaaca
tttggagaggcaagtcagaagtacaatgtgcttttcgtaggatattgtttatctcatgat
cagagatggcttttggcatcctgtacagatctccatggggaattactggagacatgcatc
ttaaacattgatgtacctaacaggtcaaggagaagtaaagtgcctgtccgcaaaatgagt
ttgcagaagctctgggagtggtgtgttggaataatgcaaatgacatcagtgccgtggaga
attgtgatgggaagacttggaagagtgggacacggagagctcaaagattggagtatcctc
attggacggcgctcactgcagtctacgagtaaacagttgaaggagacatgcgcaatgtgt
ggtatatctgctgcagactctcccacaattctcagtgcctgcttggttgccttggagcca
cagggttcatttgttgtaatgccagatgctgtcacaatgggttctgtatttggacgtggc
acagctctcaatttgcaaacatctcagctaaacaccccacaagatgcatcctgtactcac
attctggttttcccaacatctgctgctacagttgttgccaatactgaagctctggaaggc
cttggtaaccaagatggcataggaattttggacgaggatatttttgctgaagactttgat
aatgatatccggatactaataactggtaatctcacctctcctgattcaccaactggcatc
ggtgcaagttcacattttcagcacagcagtgaagctggcaggggtcaaggtggtgagcgg
ctactctccactgaagctcatgaggaagttgcaaatgtactccagcaaccacttgctctt
ggatattttgtatcaactgctaaagctgagaaccttcctcagtggttttggtctgcctgc
cctcatgctcaaaatcaatgtcctttgtttttaaaggcctctttgcatcaccatgtctcc
ctggcacaatctgatgaactacttcctggcaagcacactcatcctcaccctctggattcc
aatcgaacttcggatgttttgaggtttgtgctggaacagtataatgccttatcatggctc
aactgtaaccctgccacgcaagatcgccagtcctgtctaccagtccactttgtggtgctt
actcaaatgtacaatgccattatgaatttactttga
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