Hemitrygon akajei (red stingray): 140738337
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Entry
140738337 CDS
T11019
Symbol
clip1a
Name
(RefSeq) uncharacterized protein clip1a isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
140738337 (clip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
haka03036
]
140738337 (clip1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
haka04812
]
140738337 (clip1a)
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
140738337 (clip1a)
Cytoskeleton proteins [BR:
haka04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
140738337 (clip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
ERM_helical
Motif
Other DBs
NCBI-GeneID:
140738337
NCBI-ProteinID:
XP_072921647
LinkDB
All DBs
Position
14:19483015..19643368
Genome browser
AA seq
2204 aa
AA seq
DB search
MSLLKPSGLKAPSKIAKPASTAVKQAATQSATSVATTQKASSGEKSSSTSTTEAQEEHVS
DFKIGERIWVNGSKPGYIQFLGESQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLRG
IFTRPSKLSRSPVVDGEASGSQTRATSASRATSPTSTSASGAAAPSPSTAQKAAPAGAQD
SAAMSNLLKTGSESVSNLSEAGSVKKGERELKIGDRVLVGGTKAGVVRFLGETDFAKGEW
CGVELDEPLGKNDGAVAGTRYFQCQAKYGLFAPVHKVTKIGFPSTTPAKAKTTVRKVVTT
PSNLKRSPSASSISSLSSVASSISGRPSRSGLLTETSSRYARKISGTTALQEALKEKQQH
IEQLLAERDLERAEVAKATSHVGEIEQELTLLRTGHEQNVLEMEAKMDQLRALVEAADRE
KVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKAEKL
QRELEDTRVATVSEKSRIMELERDLASRTKEVSELQQRLVSIDVSGNVESAPLLEEISCL
QDKLATLNKEHQSELKTLKEKLETSEEDHQKVLQLQAATEKVSEENVTLKSKLDQATNEN
SEVVSLWKRKLESAIESHQQAMQELKSSFSKGADSQTTELLELKSNLEKLKADHQLELEN
IKIQQDNEKSTYLKETEDLQSRLSEITSEKEKDIDNLKSQLEYTTNQHLVEMEETLTKLQ
ETKDKLQELQVLQSKSNEQAQIVEELTAKLAAAEQKVMDYELLHEAEAQEREKIKRLEEK
LAAVESELKIRESLKLSEENKVIDLAKQLEEQHQSFVNLNQSLTVVSQDKQTLEQQLQTM
KEKFDGASEAQYKLQQTLEETLTKLLAKEEQNTSLSSEVAELKSQLSATERRIKVEKEKA
EQLTEDKTKLEDTISEMMKSSGDNSAQLTKMNEELKLRERKQDELQELLRQSTEKVAYLQ
ENLEQVTNKTEQMQAEQQQKHQNELQAIMEKMTGLQEQVEMHSTHTKELQSNHEKVVSEI
NRNNDSLVKELKTNLQETKEALKSSQEKNNQREELVEELKRQVEQVQSLTSELATAKSQY
EQIAEDVRALKGDKEQMIQQNDALKSEKESLFYELSELKLQCTSLQKEQQVLESKNEKLQ
LERTAFLQERQDFESTQQQLCLEKDALLTEKDHIFLEAKHLQQLLDKLTKENEDLQASRS
ELSNQLDNVQTKSKVVEHEQARLLQEKEELLLAHRKVITEREELTKEKDKITENFDKLRE
ETAVTLEKLMKERDVLMVEKDLILLKCSELEAQNELLGKEKNLLNSERDELISKNEALNK
EKDHLGSSLEKTILENQSFVISKDQLQFSHDRLKNELEKCLKENAELQASKSSQAKLLDE
IKNSREVTDSERVQLLQEKEELTTSQRQLTIERDELAKEKIELTAKLQQSIEEAAIATKQ
LNEEKDGLQTEKDALCLKQSQLETQCDFLQKEKEALESKSNMQMAENASLSAEIAEFNLK
QRQLVSENAAIVAERNQLLSNTELLQRKLDESAKANEELQASKSSFSTLLDEIQSSKNIV
DLERHTLLQEKERLVAELQEQCTEKEHLTCQKVELEEKYSKQNEQMRVLENQLTQERDAA
KMEREALSVAHAELENHFHLLTNEMGILRTKHNEVLSENCVLIKENEALHAEQKKSACER
EGLAAEKNWLASTTEELKKEIEILTKENVESQASNSNLSKLLDELRGSQELSDLDQVKLQ
EEKDNLLATVLNLKAEKEELVRENSKLAKSLSQLDKEAALSAQDKGETEAKLQQLTCDKE
VLLKREEDLSSKLKDLQVHQNITLSEKIEAARQAEEAKQSLEQVMKEKNILDQRKAETLA
ELQESRLKNQKLENELEALKEQNNKCQEDLNHSKQQLSSENKRIGNLCKEIEELKLAAAQ
KTQQLAALHEENSKLASELGRSKDEVTSHQKLEEERSALNNQLLEMKKSLPNNTLRESLL
KKEFEEDKNSLQKSIATTSALITDKDKELEKLKNEIAVLRSENAMAKNLQSVVQSLESDK
SKLEQKVQSLEKKINDNQRQLDNITSSPGEQVIEEQREENDSAESQIDFLNSVIVDLQKK
NEQLKVQLEKLAEASLNGNVADDVNNFGTLDGTQTKKKPPPRLFCDICDCFDLHETEDCP
KQAQMSEFPPHSTYHGSRKDERPYCDICEVFGHWTNNCNDDETF
NT seq
6615 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgctaaaacctagtgggttgaaagctcccagcaagattgccaagccagcaagt
actgcagtgaagcaagcggctacacaatctgcaacatctgttgctaccacacaaaaagca
tcatctggagagaaatcttcaagcacatccaccacggaggcgcaggaagaacatgtgtct
gacttcaagattggagaacgcatctgggtaaatggcagtaaacctggttacatccagttc
cttggggagagtcagtttgcccctggccagtgggctggaattgttttggatgaaccaatc
ggtaaaaatgatggttcagttgccggggttcgatatttccaatgtgaaccattgcgtgga
atatttacaagaccttcaaagttgtcacgaagcccagtggtagatggtgaagctagtggt
tcacagactcgggcaacatctgcttccagagcaacatcacccacatctacatcggccagt
ggtgcagcagctccgtctccgtcaactgcacaaaaagctgcaccagctggagctcaggat
tctgcggctatgtccaatctcttaaaaacaggaagtgaatctgtgtcgaatctctcagaa
gctggttctgttaagaaaggggaacgtgaattaaagattggagacagagtcttggttggt
ggtaccaaagcaggagtggtgcgcttcttaggagaaactgattttgctaagggggagtgg
tgtggagtggaactggatgaacccctcggaaagaatgatggagctgtggctggaacgaga
tactttcagtgccaggcaaagtatggtctttttgcaccagttcataaagttaccaaaatt
ggatttccctcaacaacaccagctaaagccaagacaactgtacgaaaagtagtaactacc
ccatcgaatctcaagcggagtcctagtgcatcatccatcagctctttaagctctgtagca
tcttccatcagtggtagacctagtcgatcaggattgctaacagaaacctcttcacgttat
gcaaggaaaatatcaggcaccaccgcattacaggaggctttgaaggagaagcagcagcac
attgagcagttgctggctgagcgagacctggaaagagcagaggttgccaaggcaacgagc
cacgtgggagaaatcgaacaggagctcacgttacttcggacaggtcacgaacagaatgta
ttggagatggaggcgaagatggaccagttacgagcattagtggaggctgctgacagagag
aaggtggagcttttaaaccaactggaggaagaaaaaagaaaagtggaagatcttcagttc
cgtgtagaggaagagtccattaccaaaggtgacttagagacgcagaccaaactggagcat
gcccgcattaaggagcttgaacagagcctgctctttgaaaagaccaaagctgaaaaactc
cagagggagttagaagacactagggtggctactgtgtctgagaagtcacggattatggag
ttagaaagggatctagcatcgcgcacaaaagaagtctcagagcttcaacaaagacttgtg
agcattgacgtttctggtaatgtggagagtgctcctttgttggaagaaatatcttgtttg
caagataagcttgcaacattgaacaaagaacatcaaagtgaacttaagacattgaaagaa
aaacttgaaacctcagaggaagatcaccaaaaggtacttcaactgcaggctgcaactgaa
aaggtttctgaggagaacgtgactctcaagtccaaattggatcaagccactaatgaaaac
tcagaggtggttagtctgtggaaaaggaagctagagtctgcaatagagtctcatcagcaa
gccatgcaggaactcaagtcttccttcagtaaaggagcagattcccaaactacagagctt
ctagagctgaagagtaatttagaaaagctgaaagccgaccatcaattggaacttgagaat
attaaaattcagcaagataatgaaaagtcaacctatctaaaagaaactgaagatttacaa
tctcggctatcagaaatcacttcagaaaaggaaaaggatatcgataatctcaagtcacaa
ctggaatatactacaaatcagcacttggtagaaatggaagaaactttgacaaagctacag
gaaaccaaagacaagttacaggaattgcaagttttgcagtctaagagcaacgaacaggca
caaattgttgaggaattaacagcaaaactagcagcagcagaacaaaaggtgatggattat
gaattgctacatgaagctgaagcacaagaaagagaaaagatcaaaagacttgaagagaag
cttgcagctgttgagtcagagttgaaaatccgtgaatctttaaagctttctgaagagaac
aaggttattgatttggccaaacagctcgaggaacaacatcagtcatttgttaatctgaac
caaagtttgactgtagtgagccaggataaacaaactttagagcaacaactgcagaccatg
aaagaaaagtttgatggagcatcagaagcgcagtacaaattgcagcaaacattagaagaa
acactcaccaagctccttgcaaaagaagagcaaaacacttcactttcatctgaggtagca
gagctcaaatctcagctttctgctacggaaagaagaattaaagttgagaaggaaaaggct
gaacaactaactgaggataaaaccaaacttgaggacaccatctctgagatgatgaaatct
tcaggggacaactctgcccagcttacaaaaatgaatgaagagctgaaactcagagaaagg
aagcaggatgagctacaggaactacttcgtcagtccactgaaaaggttgcttatttgcag
gaaaatttggagcaagtcacaaataaaacagagcagatgcaggcagagcagcaacagaag
catcagaatgagcttcaagcaataatggagaaaatgacaggcctgcaagagcaggtggaa
atgcacagcacgcacactaaggaactgcaaagcaaccatgagaaagtggtttcagaaata
aataggaacaatgattctttggtgaaggagctcaagacaaatttacaggaaaccaaagag
gcactgaagagctctcaggagaaaaataatcaaagagaagaactcgtagaagagctgaag
agacaggtggaacaggtccagtctttaaccagtgagctagcaacagccaaatctcagtat
gagcaaatagcagaggatgtgagagctttgaagggagataaagaacagatgatccagcaa
aatgatgcactaaagtccgagaaagagtccttattttatgaactttcagagctgaaatta
cagtgtacctccctccagaaagagcagcaagtgttagaatcaaagaatgagaaacttcag
ttggaaagaacagcatttttacaagagaggcaggattttgagagtactcagcaacaactc
tgtttggaaaaagatgctttactgactgaaaaggaccacatcttcctggaagctaaacat
ttgcagcagctccttgataagttgaccaaagaaaatgaggacctccaagcctcacggtca
gagctgagcaaccagttggataatgttcagacaaaaagcaaagtggttgaacatgaacaa
gcccggttgcttcaagaaaaggaagagttattattggcccacaggaaagtgattacagaa
agagaggaacttacgaaagaaaaagacaaaattactgaaaattttgacaagctgcgtgaa
gagacagcagttactcttgagaagctgatgaaagaaagagatgtgctgatggtggaaaaa
gatttgattctattgaaatgctcagagcttgaagctcaaaatgaacttttaggaaaggag
aaaaatctgctaaactcagaacgtgatgagctaatatctaaaaatgaagctctaaataag
gagaaggaccatcttggttcaagtttagagaagactatccttgaaaatcagtctttcgtt
atctcaaaagatcaactacaatttagtcatgatcgattaaagaatgaactagaaaaatgc
ttgaaagaaaatgcagaacttcaggcctcaaaatccagccaagccaaactcttggatgaa
attaagaacagcagggaggtaacagattctgaacgtgttcagctgctccaggagaaggaa
gagctaacaacatctcagagacaactgaccatagagagggatgaactagctaaagaaaaa
atagagctgactgcaaagctgcagcaatccattgaggaggcagctatcgccacaaagcag
ctgaatgaagaaaaagatggtctgcaaactgagaaagatgcactttgtctgaagcaatca
cagctggaaacccaatgtgattttctgcaaaaggagaaggaggccttggaatcaaaaagc
aacatgcaaatggcagaaaatgcatctctctcggctgagatagccgaatttaatttgaag
caaaggcagctagtctccgaaaatgcagccattgttgcagaaaggaatcagctcctcagc
aacactgagcttttacagcgaaagcttgacgaatcagcaaaagcaaatgaagagctccag
gcctcgaaatcaagtttctctacacttttggatgaaattcagagcagcaaaaacattgtg
gatttggaaaggcataccctgttacaagagaaagaaaggctggtcgctgaacttcaggag
caatgcactgaaaaagaacatcttacttgtcagaaggtggaattggaggaaaaatacagc
aagcagaatgaacaaatgagagtacttgagaaccaactaacacaggaaagagatgctgca
aaaatggaaagagaggcccttagtgtggctcatgcagaacttgaaaaccatttccattta
ttaacaaatgagatgggcattcttagaactaagcacaatgaagtactttcagaaaactgt
gtgctaataaaggaaaatgaggcattacatgctgaacaaaagaaatctgcctgtgagagg
gaaggcctagcagctgagaaaaattggctggcatccaccactgaagagctgaagaaggag
attgaaatattaaccaaagaaaatgtagaatcccaggcttcaaattcaaatctttcgaaa
ctcttagatgaacttcgcggtagccaggagctatctgacctggatcaagtaaagctgcag
gaagagaaagataatttgctggcaacagtgctaaaccttaaggcagaaaaagaagagctg
gttagagagaatagcaagctggcaaagtccctctctcagttagacaaagaggctgctctt
tctgctcaagacaagggagaaactgaagcaaaactgcagcagctgacatgtgacaaggaa
gtattgctgaaacgtgaagaggacctttcttccaaattaaaagatcttcaggttcatcag
aatattactttatcagagaagattgaggctgcgagacaggctgaagaggctaaacagtca
ttagagcaagtgatgaaggagaaaaatatactggaccaacggaaggccgaaactttggca
gaattgcaggaatccagactaaagaaccaaaagcttgaaaatgagctggaagctcttaag
gaacagaacaataaatgccaagaagacttgaaccactcaaaacagcagctgagctcagag
aataagagaataggaaacctttgcaaagaaatagaggagctgaagctggcagcagcccag
aagacccagcagctggcagcactacacgaggaaaacagcaaactggcaagtgagctgggt
aggagcaaggacgaagtcaccagccatcaaaagctcgaagaggagcgatctgcacttaat
aatcaactgctagaaatgaaaaagagcttgcccaataacactttaagagaatccttatta
aagaaagagtttgaagaagacaaaaactctttacagaaatccattgcaactaccagtgcc
ttaataacagataaagacaaagaactagagaaactcaagaatgagattgcagtgctacga
agtgagaatgccatggcaaaaaatttacagtcagtagttcagtcactggaatctgataaa
tcaaaacttgaacaaaaggtacagagtttggagaagaaaatcaatgataaccaaaggcag
cttgacaacatcacatcctctccaggtgaacaagttattgaagaacaaagggaagaaaat
gattctgctgagagtcaaattgatttcctgaactctgtgattgtggatttgcaaaaaaag
aatgaacaactgaaagtgcagctagaaaaactagctgaggcatcccttaatggcaatgtt
gctgatgatgtaaacaactttggcaccttggatgggacacaaacaaagaagaagccacca
ccacgtctattttgtgacatatgcgattgctttgacctccatgagaccgaggattgtccc
aaacaagcacagatgtctgaatttcctccacattctacttaccatggcagtagaaaagac
gaacgcccttattgtgacatctgtgaggtatttgggcattggacgaacaactgcaatgat
gacgaaaccttctaa
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integrated database retrieval system
