Hemitrygon akajei (red stingray): 140738445
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Entry
140738445 CDS
T11019
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
haka03041
]
140738445 (tfip11)
Spliceosome [BR:
haka03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
140738445 (tfip11)
Other components
Complex C specific factors
140738445 (tfip11)
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Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
DUF1281
Motif
Other DBs
NCBI-GeneID:
140738445
NCBI-ProteinID:
XP_072921833
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Position
14:complement(30504379..30532969)
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AA seq
830 aa
AA seq
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MSMSHLYGKDSIDDDDVEVERFEISDWDLENEFNPDRVRHRQTKEDAIYGMWAENDSDDE
RPSFGGKRSKDYTAPVNFISAGLRRTAAEENEEKDSDESDEEKVKREEFSKEFAPKKLKT
GGFFKSHSKGFTGGHRTNQEIGTWEKHTRGIGQKLLQKMGYVPGKGLGKNAQGIVAPIEA
KMRKGKGAIGAYGSERTEQSLKDFPIVDSDEDADEEFQKEMSQWRKDPTGGKKKPKYNYK
TVEELKAKGASSLGRKMATPQTELSQVKVIDMTGKEQKVYYSYSQINQKHDIPDDAQSPG
KDAKTEGFSLPELEHNLELLIEMTEQEIIQNDRQLQYERDMVVNISHENEKLTEILAHEG
KIIDKLSHILQIVEDCEKRLQPNCENPLTLEECAKIFELLQEKYFEEYKMFDLAELSIAI
VFPLLGEYFKSWNPLQDNKYGLDVMSKWRKLLERDQLQHGGCDMLSMDPYHRLMWEVWMP
SARNVVSQWLPRNCAPMVDFLENWMPVIPLWILDNILEQFVFPKLQREVENWNPLTDTVP
IHAWIHPWLPLMQMRLEPLYSPIRNKLSNALQKWHPSDSSAKLILLPWKDVFTPGSWEAF
MVKNIVPKLGMCLNEFVINPHQQHMDAFHWVMDWEDMISPSSLIGLLEKNFFGKWLQVLC
SWLSNSPNYEEITKWYLGWKSMFSDQVLAHPTIKEKFNEALDIMNRAVTSTVGGYMQPGA
RENIAYLTHTERRRDFQYEAMQERREAENMAHRGIGVTSTSIPMNFKDLIQAKAEEHNIV
FMPLMGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcacatctgtatgggaaagacagtattgatgatgatgatgtggaggtggag
cggtttgagatttcagactgggacttggaaaatgaattcaatccggaccgtgtccgccac
cgacaaacaaaggaagatgcaatctatggcatgtgggctgagaatgactctgatgatgaa
agaccaagtttcggagggaaacgatccaaagattacacggctccagtgaacttcatcagt
gctggactccgtcgaacagcagctgaagaaaatgaagagaaggactccgatgaatctgat
gaagagaaagttaagcgagaagaattttcaaaagagtttgcaccaaagaaactgaaaact
ggtggttttttcaaatctcattcaaaaggattcaccggaggacatcgaactaatcaggaa
attggcacctgggaaaaacacactagagggattggacagaaactgctgcagaagatgggt
tatgtgcctgggaaaggtcttggaaagaatgctcaaggcattgtggcgccaattgaggca
aagatgaggaaggggaaaggagcaattggtgcttatggatctgaacgaacagaacaatca
ctgaaagactttcctattgtcgactcggacgaggacgctgatgaggagttccagaaggaa
atgagccaatggcggaaagatcctactggtgggaagaagaaacccaagtacaactacaag
actgtggaggagctaaaggcaaagggagcatcaagcttgggtaggaaaatggctacacca
cagactgaactctctcaggttaaggttatagacatgacgggaaaggagcagaaagtttat
tacagttacagtcagataaatcagaagcacgatattcctgacgatgcacagtctccgggc
aaagatgccaagacagagggcttttcacttccggagctagagcacaacctggagctgctg
attgaaatgactgagcaggaaatcattcagaatgaccgtcagctccagtacgagagggac
atggtggtcaacatctcccatgagaacgagaagctcactgaaatcctcgcgcatgagggg
aagatcatagacaagctcagccacatcttgcagattgtggaggattgcgagaagagactg
cagcccaactgtgaaaatccactgacgctggaagaatgtgcaaaaatttttgaactgttg
caggagaaatattttgaagaatataagatgtttgacctggcagaactctccattgccatt
gtatttccactgctgggagaatactttaagtcctggaatcctttgcaggataacaaatat
ggtttagatgtcatgtctaagtggaggaaacttcttgaacgagaccagctgcaacatgga
ggttgtgatatgctgtcaatggacccataccacaggttaatgtgggaagtgtggatgcct
tctgcacgcaacgttgtatcgcagtggttgccccggaactgtgcccccatggttgatttc
ctggaaaactggatgcctgtgatccctctttggattttggacaatatcctagaacagttt
gtttttcctaaattacagcgtgaggttgaaaactggaacccattaacagacacagtcccc
atccatgcatggattcacccgtggctgccactaatgcagatgcgccttgaaccactgtat
tcgccgatccgcaataagctttccaatgctttgcagaagtggcatcccagtgactcgtct
gcaaagctgatcctgttgccttggaaagatgtgtttacaccaggatcctgggaagctttc
atggttaaaaatattgttccaaaactgggaatgtgtttgaatgagtttgtaatcaaccct
caccagcagcatatggatgccttccactgggtgatggactgggaagatatgatctcaccg
tccagcctcataggattgctcgagaagaatttttttgggaagtggctacaggtgttatgt
tcgtggctcagtaatagccctaactatgaagagatcactaagtggtacctgggctggaag
tccatgttctccgaccaagtgttggcccacccgacgatcaaggagaagtttaatgaagca
ctggacattatgaaccgggctgtcacctccactgttggtggctacatgcagccaggagct
cgagaaaacattgcctacctcacccatacagagcggcggagggacttccagtacgaggca
atgcaggagcgccgcgaggctgagaatatggcacaccgtggcattggagttacatctacc
tccataccaatgaacttcaaggacctgatccaggccaaggctgaagagcacaatatagtc
tttatgcctttgatgggcaaacgtcatgaggggaaacagctctacacctttgggcgcatt
gtcatctacattgacagaggggttgtgtttgtacagggagagaaaacttgggtgccaacg
tcgcttcagagcctcattgatatggctaagtaa
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