Hemitrygon akajei (red stingray): 140738455
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Entry
140738455 CDS
T11019
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X1
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03030
DNA replication
haka03410
Base excision repair
haka03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
140738455 (pole)
03410 Base excision repair
140738455 (pole)
03420 Nucleotide excision repair
140738455 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
haka03032
]
140738455 (pole)
03400 DNA repair and recombination proteins [BR:
haka03400
]
140738455 (pole)
Enzymes [BR:
haka01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
140738455 (pole)
DNA replication proteins [BR:
haka03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
140738455 (pole)
DNA repair and recombination proteins [BR:
haka03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
140738455 (pole)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
140738455
NCBI-ProteinID:
XP_072921850
LinkDB
All DBs
Position
14:31849101..31998911
Genome browser
AA seq
2285 aa
AA seq
DB search
MVLQNSGKLRPERAHGADSNYSDDGSSLPALKRLERSQWTDEMDARFGFERLKDPGEKTG
WLINMHPAEILNEDKRMISVVDYYFVEEDGSRFKVALPFQPYFYVATKKGCEREVSSFLS
KKFQGKISKITTVPKEDLDLPNHLVGLKRLYIKLAFNTVDELIKVRKEIFPAVRKNKEKE
KSNDAYTVMLASALAGGNVTEEEETSKKISDQLENIIDIREYDVPYHVRVSIDLKIQVAH
WYNIQIRGGIYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAENDQIMMISYMIDG
QGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEASLIRRWFEHIQETKPNIFVTY
NGDSFDWPFVETRAAVHGLNMYREIGFQKDSQGEFKASQSIHMDCYRWVKRDSYLPVGSQ
NLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVSTYYMYMKYVHPFIFALC
TIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQVFNKLTSDGHVLDSETYVGG
HVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTMQHAIEEEEKLPMEQVINFQEVCDE
IKQKLNCLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEITCAACDFNKPGAN
CQRRMTWTWRGEFMPASRSEYHRIQQQLESEKFPPAFPNDQPQAFHELSREEQAKYEKKR
LADYCRKAYKKIHITRIEERVTTICQRENSFYVDTVRAFRDRRYEFKGSHKVWKKKLSAA
VESGDATEIKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCHTGANI
IMQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSNNPKKPKVTISYPGAMLNILVK
ERFTNEQYQELMDPTTLTYETRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNED
GSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSKAA
NMPDTELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFVISK
KPEGSPVTERAIPLAIFQAEPSVRKHYLRKWLKSPSLQDLDIRLILDWDYYIERLGNAIQ
KIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKINELFTNTGVRQVTSNLCGT
SSQHSEIQDLEDLGNPKQKPQPVIPISTKRRRGGNEESQEGSQDLELTQSWREILGPPPP
LGETKSERLVWLRYQKKKWELQAKQRKARRKRRKLDDGAFAPGRPIRDGPANSLSSFLRR
TARTILDMPWQIVQIAETSQPGLFKLWAVVGSDLHCIKLNIPRVFYVNQRIPKTEDGAVY
KKVNRILPRSNIIYNLYEYSVPEDMYQAHINEINADLSAPDVEGVYETQVPLLFRALVQL
GCVCVVNKQLSFHLAGRETDSFDLEHLEMCSLAQFSYLEPGSVRHIYFYHNAQGNKALFG
LFIPSQRKASVFVLDTVRSNQMPNLNNLYAAERTAMLEKLDEELLPPDKHTFEVRAEKDS
KQIYRAIQRLLLSYKDERRGPTLIAVQSKWDLKRLTNGMPILDDFPLVPVNVIDDINYGV
LDWQRHGVRRMIKHYLSLDSILSKAFEMARYYHIPIGNLPDDISTFGSDLFFSRHLRRHN
HLLWLSPTSRPDLGGKEADDNRLVMEFDERSTVEINNPGRYSTVSVELDIQNLAVNTILQ
SHHINDMEGASSLGVSFDVIQQASLEDMMAGNQAANALASYDETALCSHTFRILKSMVVG
WVKEITHYQNMYADNQVMHFYRWLRSPSSLLYDPALHRTLQNMMKKLFLQLVAEFKRLGS
SVIYANFNRIILCTKKRRIEDSIGYVEYITKSIHSREIFHSLSISFSRCWEFMLWMDPAN
YGGIKGRIHFDNLNGEAESNKEAEELDIDENSDNDIEEVHSEDDEGSINVEDLLDNNWNI
MQYLPQDASCQSYFLMIVSAYIVAVYHSMKEELRRSAPGCTPIKQRGVSQISQDPAGETG
TSAGLITFSQEYVSNELTQNFFTITQKIQKKVSSNRHSTESSEMFPVLPGSYLPFNNPSL
EFIKSVCKILSLDSNITNQVNKLKRDLLRLIDVGEFSEEAQFKDPCRSYIVPEIICRNCN
FCRDLDLCKDPSILQQDGTLLPKWCCTNCQGTYDSDAIEMALVEALKKKMMAYTLQDLVC
SKCKGVKEANMPIYCHCARDFDLTISMTGFMEQIQVFRNIARHYNMPFLMETVDWMFKMN
IHLKS
NT seq
6858 nt
NT seq
+upstream
nt +downstream
nt
atggtgttacagaacagcggcaaactgagaccggagcgtgcccacggcgccgacagcaat
tactccgatgatggttcctcccttcctgcactcaagcgcctggagcgcagtcagtggaca
gatgagatggatgcacgttttgggtttgaacgcctcaaagatccaggagagaaaacaggc
tggctgatcaacatgcacccagctgaaatcctaaatgaagacaagagaatgatcagtgtt
gtggattattattttgttgaggaggatggaagcagatttaaggttgctctgcctttccaa
ccttacttctatgttgccacgaaaaagggctgtgagcgagaggtttcgtcgttcttgtct
aagaaatttcagggaaaaataagtaaaataacaactgttccaaaagaggatttggatttg
cctaaccatctagttggtttgaagagactctacattaagcttgcctttaacacagttgat
gaactaataaaagttcggaaagaaatttttccagcagtgaggaaaaacaaagaaaaggag
aaatcaaatgatgcctacacggttatgttagcaagtgccttggctggaggaaatgtgaca
gaagaggaagaaacgtcaaaaaaaatttctgatcagttggaaaacattattgacattcga
gaatatgatgtaccttatcatgtccgggtatccattgatctgaagattcaagtggcacat
tggtacaacattcaaatacgtggtggtatttatcctcctgagattgtgcgtagggatgac
ttggttgaacgaccagatcctgttgttttggctttcgacattgaaaccacaaaactacca
ttaaaatttccagatgctgaaaatgatcagattatgatgatttcatatatgattgatgga
cagggttatttgattacaaacagggaaattgtatctgaagacattgaggattttgagttc
acaccaaagccagaatatgagggtcctttttgtgtgtttaatgagccagatgaggcgagc
ttaatccggagatggttcgagcacatccaagaaactaagcctaacatatttgtaacgtat
aatggagactcttttgattggccatttgtggagacacgagcagcggtgcatggtttgaac
atgtacagagagattggctttcagaaggacagtcagggagagttcaaagccagtcagagc
attcacatggactgctacagatgggtgaaacgagacagttacctgcctgtgggtagtcag
aacttgaaggctgcagccaaagccaaactgggctatgaccctgtggaattggatcctgaa
gaaatgtgtcgaatggccactgaagaaccacagacgttagcgacttactcggtgtctgat
gctgtgtctacttactacatgtacatgaagtacgtgcatcccttcatttttgccttgtgt
acaatcattccaatggaacctgacgaggtgttaagaaagggttccggaacactttgtgag
gccctcctgatggtccaggcttttcatgccaacatcatcttcccaaacaagcaggaacaa
gtctttaataaactgacaagtgacggtcatgtgcttgactcggagacgtatgtaggagga
cacgttgaggctttggaatcgggagtttttcgcagtgatataccgtgccgatttaaaatg
aacccagcagcgtttgactttttgctgcagagagtggagcgcacgatgcaacatgcgatt
gaggaggaggagaagctcccaatggagcaggtcatcaatttccaagaggtatgtgatgaa
attaaacagaaactgaactgtttgaaagaagttcccaacagaattgaatgccctctcatt
taccatttggatgttggagcgatgtatccaaacatcattctgaccaaccgcttacagcca
tctgccatggtggatgaaattacctgtgcagcctgtgattttaacaaacctggtgcaaac
tgtcagcgcaggatgacatggacttggagaggagaattcatgcctgcctctcgcagtgag
taccatcgcattcaacagcagcttgaatctgagaagtttcctcctgctttcccaaatgac
caaccgcaagcttttcatgagctgtctcgtgaagaacaggcaaagtatgaaaagaagaga
ttggcagactattgtcgcaaagcttacaagaaaattcatatcactagaatagaggaacga
gtaaccacaatttgccagcgtgaaaattccttttatgtagatacagtgcgagctttccgt
gacaggcggtatgaatttaagggttcacataaggtgtggaaaaagaaattgtctgctgca
gttgaatctggagatgctacagaaatcaaacgttgtaagaacatggagattttgtacgag
tccctgcagctggcacacaaatgtattctaaactccttctatggttatgtcatgcgcaaa
ggagctcgttggtattccatggaaatggctgggatcgtctgtcacactggtgctaatatt
atcatgcaggcaagagaactgatagagcagattgggcgacccttggagttggacactgat
ggtatttggtgtgtccttcctaattctttcccagaaaactttgtcatcaagtcaaacaat
cccaaaaagcccaaagtgacaatctcttaccctggtgctatgttaaatatcctggtgaag
gagcgattcaccaatgaacaataccaagagctgatggaccctacaacactgacatatgaa
acacgctcagaaaacagcattttctttgaagttgatggaccttatctagctatgattctg
ccagcttccaaagaggaaggaaaaaaactcaagaagagatatgcagtctttaatgaggat
ggctcactagctgaactgaaaggttttgaagtgaagcgtcgtggagaattgcagctcatc
aagatttttcagtcatctgtgtttgaggcctttctgaaaggcactactttggaggaagtg
tatgcatcagttgccaaagtagctgattactggctggatgtactctacagcaaggcagca
aacatgcctgacacagagttatttgaactgatctctgagaatcgatcaatgtctcgtaaa
ttggaagattatggggagcaaaagtccacctcaatcagtactgccaaacgacttgcagaa
tttcttggggatcaaatggtgaaagacgcaggactgagttgtcgttttgtcatctccaag
aaaccagaaggatccccagtgacagaaagagcaattccactggccatttttcaggcagag
ccaagtgttagaaagcactatctgaggaagtggttgaagagtccttcattgcaggacctt
gatatacgattaattcttgactgggattattacattgaacgtcttggcaacgctattcag
aaaattatcaccatccctgcagcccttcagcaggtgaagaatcctgttccacgggtccga
catcctgattggcttcataaaaaattgctggaaaaaaatgatgtttacaaacaaaagaag
atcaatgagctcttcacaaacactggagtcaggcaggtgacatccaacctatgtgggaca
agtagtcagcattcagagattcaagatctggaagatttaggaaatccaaagcaaaaacca
cagccggtcatccccatcagtacaaaaagaaggcgtggtgggaatgaagagagccaagaa
ggatcgcaagacctggaattaacacagtcttggagagagatattgggaccaccaccacca
ctaggagagacaaagagtgaacggttagtgtggttaagataccagaagaaaaaatgggaa
ctccaggcaaaacagagaaaagcacgcaggaagagaaggaagctggatgacggtgcattt
gcaccagggagacccattcgggatggcccagcaaacagcctcagtagctttttacgtcgg
actgcccgcactattctagacatgccatggcagattgtacagattgcagaaacgagtcag
ccaggtctcttcaaactatgggctgttgttggtagtgatttgcattgcattaaactcaac
atcccacgagttttttatgtaaatcaacgaattcctaaaacggaggatggtgctgtctac
aaaaaagtcaatcgaatccttccccgttccaacattatttacaatctttatgaatattct
gtgccagaggacatgtaccaggcgcacatcaatgagatcaacgcagacctctctgctcca
gatgttgaaggagtctatgaaacgcaggtccctcttctctttcgtgctcttgtccagctt
gggtgtgtttgcgtggtcaataagcaattatcattccatctagcaggacgagaaacggat
agctttgatttggagcatctggaaatgtgttcattagcacagtttagttacctggaacca
ggtagtgttcggcacatttatttctatcacaacgctcaggggaataaggctctctttgga
ctattcataccttctcaaaggaaagcttctgtatttgttcttgacactgtacgtagtaat
caaatgccaaatttgaacaatctttatgctgctgagaggactgctatgctggagaaattg
gatgaagaactgctgccacctgataaacacacatttgaagttcgagcagaaaaggattca
aagcaaatctacagagcaattcagcggcttctcctgagctacaaggatgaaagaagaggt
ccaactctcatagcagtccagtcaaagtgggacctgaagaggctgacaaatggaatgcca
attctggatgatttcccattagtgcctgttaatgtaattgatgacattaactatggagta
ttagattggcagcgtcatggtgtccgtagaatgattaaacactacctcagtctggatagc
attttgtctaaggcatttgaaatggccagatactaccacatacccattggaaatctcccg
gatgacatctccacttttggatcagaccttttcttttccagacatcttcgtcgacacaac
catctgttgtggctttccccaacatctcggcctgatttaggagggaaagaagcagacgat
aatcgtctggtgatggaatttgatgagaggtcaacagttgagatcaataatccaggacga
tattctacagtttctgttgaactggacattcagaatctggctgtgaatacgatcttgcag
tcccatcacatcaatgatatggagggagcatccagcttgggtgtcagctttgatgttatc
cagcaagcttcgcttgaagatatgatggctggtaaccaagcagctaatgcattggccagt
tacgatgagacagcattgtgctcacacacattcagaattttgaagagtatggttgtaggc
tgggttaaggagatcacccactatcagaatatgtacgctgataaccaagtaatgcacttt
tatcgttggctgcgttctccctcttcactgctgtatgaccccgcgctgcatcgcacactt
caaaacatgatgaagaagctgtttctgcagctggtagcagagttcaaaagattgggttca
tctgtgatctatgccaatttcaatcgtataatactgtgcaccaaaaagcggcgtattgag
gattcaataggatatgtggaatatatcacaaaaagcattcattcccgtgagatttttcat
tccctctccatctcattttctcgctgctgggagttcatgctttggatggatccagccaat
tatggaggtattaagggaagaattcattttgacaatctcaatggagaggctgagagtaat
aaagaagcagaggaacttgacattgatgaaaacagtgacaatgatattgaagaggttcat
tcagaggacgatgaaggcagtattaatgtagaagaccttctggataataactggaatatt
atgcagtatctaccacaggatgcttcgtgccagagttatttcctcatgattgtctcagca
tatattgtagctgtgtaccacagcatgaaagaagagctgagacgcagtgccccaggatgt
actcctatcaagcagcgaggagtcagccaaatctcgcaagatccagcaggagaaactggt
acttcagcagggttgatcaccttctctcaggaatatgtatctaatgagctcacacagaac
ttcttcactattacccagaagattcagaagaaggtgagcagcaacaggcactccactgaa
tcctctgagatgttcccagttctgccaggctcctatcttccattcaataatccatctctg
gaattcatcaaatcagtctgcaagattttgtctctggattcaaacataaccaatcaggtt
aacaaattgaaacgggatctcttgcgtctaatcgatgtgggggaattctctgaagaagca
cagtttaaggacccttgccggtcctacatagtgcccgagatcatctgcaggaattgtaac
ttttgccgagatttggacctctgcaaagacccttccatcttgcagcaggatggcacgtta
ttacccaagtggtgttgtactaactgccagggcacatatgactcagatgctatagaaatg
gcactggttgaagcattgaaaaagaaaatgatggcctatacacttcaggatttggtttgt
tcaaaatgtaaaggtgtcaaagaagctaacatgcctatctactgtcattgtgcccgggac
tttgatttgacaatttctatgacgggatttatggagcaaatccaggtatttaggaacatt
gcaagacattacaacatgcccttcctgatggagactgttgattggatgtttaagatgaat
atacacttgaagtcctga
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integrated database retrieval system
