Hemitrygon akajei (red stingray): 140738657
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Entry
140738657 CDS
T11019
Name
(RefSeq) laminin subunit beta-4-like
KO
K06245
laminin, beta 4
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04510
Focal adhesion
haka04512
ECM-receptor interaction
haka04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
140738657
04518 Integrin signaling
140738657
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
140738657
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GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
LAMB4
JAG1-like_EGF2
Nuf2_DHR10-like
F5_F8_type_C
DUF7121
TMP_3
Alanine_zipper
DUF948
Motif
Other DBs
NCBI-GeneID:
140738657
NCBI-ProteinID:
XP_072922378
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All DBs
Position
14:67431047..67570317
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AA seq
1788 aa
AA seq
DB search
MRLGTVTFLMLINIAFSEDDCNVGSCYPSLGDLLVGRSSQLSASSTCGMAGPEIYCILSH
LQEEQKCFTCDSRLDFNSVSSAFSHRIENVITAFEPDRKKKWWQSKNGVHHVSIQLDLES
LFQFSHLILSFKTFRPAAMLVEKSSDSGQTWKVLRYFAYDCARSFPNIPTAPAQRVNDVI
CESKYSDLEPSTDGEVVLKALDPHFQISNPYSPEIQEQISLTNLRINFTQLHTLGDIRLR
RQARPDEKYYYALYEMVVRGSCFCYGHASHCVPVDNIRGDVFSQQGMVQGKCVCQHNTDG
INCERCKDLFNDLPWQPAVGTVTNECKECNCNGHSDRCHFDMAVYLASGQVSGGVCEECQ
HNTMGNNCDQCRPFFYQDPGRSISDPYACVPCNCDPEGSVNNGMCESHSDPRLRTIAGRC
ICKRNVEGRRCDQCQSGYFGLSAGNAEGCEDCRCDTRGSVSSESVCDPVTGECHCLRTVT
GRNCEQCLPTYWGLGSSVYGCSPCDCDIGGAHDNICSPQDGQCRCLPNIISRQCNEPVPG
YFFPPLDYYLYEAELAQHLGSGASSRVRPTSMPLCDQYYRQQGYSFRVDQGRLILEKIAK
RHLRRQRKRQTVNPDFQVQIVSREATPDRPATWTGLGFARVPNGMGLRFTIDNIPYPMDF
TAAIHYETESTEDWTAYIRIQPRDQQQWSQCRNNLPSQDGYTLTMPGTARIAILQTPICL
EPQVQYIVDIYFNHFSSRTSNHILIDSLGLIPRINSLENFCTESDLNEYRRYECVEIASQ
LGPQTLPEVCEKLIASMSARIHNGAVACRCDPEGSISPICRKFSGQCQCKQGVIGRCCDS
CAPGFYGFGASGCSACYCDHQGSANSICDQVTGQCGCRRNIVNRACDRCQPGYYGFPNCQ
PCQCNGYSESCDPWTGACQNCGAFTTGPNCERCSEGFYGNPTLNEPCQPCRCPDIPNSGH
YFAHSCYEDPQIQQWICNCLEGYAGIHCDRCSPGFYGDRCLPCSCNDNIDRRDTGACDQW
TGECLKCLYDTYGENCQLCRPGYYGSAVNKDCRECSCNGIGVDGKHCLPDGLCTCDQGTG
HCPCLPSVVGSNCEECAPGFWNLTSGSGCEPCHCDPQNSASSPCDELTGQCQCKDGYGGR
TCSECQDNYFGNPKIQCNPCNCNFGGTKRPACNKTTGICNCREGVTGKHCNKCAWGYCKE
FPTCTQCHPCFNLLDEEICSLIPVIEGLSNKSTAHSNKLGPSYDKQLKKLEKKIAEVAKI
LNSSVASPETFEKTKDYFEKIRKIQMQIDPNVNISKDTKELNRVIDDINMEVDKLNKELN
RLKQKPAIRNVNGNFEDIKMSYQISKDSQQKANVSELVSISESTRKDATALLNNTLLIYN
DELNALRQKTELLDLTKANKLICGAQGNLSCDKDPCGGALCRDDFGNKICGGQGCNDLLF
MASVTKNNAERTSDQMTQLLNKMLNTISKLDSIRNRTQETKEKATKLLGKLGKTKDELER
EKQETKDIIRKVKEFLTADGVSPEDLEAVVNHVLSIKLPVTPEEVKNKTKQIQDILSEIK
DVDKEVERLNNRSQEAKLLLKRAMKAEKRAQEIPSTKELQKELDKIKEVQRTVTGTVNII
TRDLNSAKTKISQVNDKIRSISDNLMNLMNNIAKFQNDIEGLRKKTENNKIASKKAMEKA
NEAKTNADEAEQEFKTLNEAYVKLTSLSIQEIPKDGKQKAEELLREASDLAKDLESKLRR
ITELEEQMKDRNRKLKENSDYLSKLEENVTSIKEFIEEKIIFYNNCLP
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggggactgtgactttcctaatgttgataaacatcgctttctctgaagatgat
tgcaatgttggctcctgttacccatctcttggagacttgcttgtgggtcgcagcagtcag
ctctccgcttcctccacctgcggcatggctgggcctgaaatatactgcattctaagtcac
ttgcaggaagaacaaaagtgttttacttgtgattcaagattagatttcaattctgtcagc
tctgccttcagccatcgcattgaaaatgttatcacagcttttgaaccggatcggaagaag
aaatggtggcaatccaagaatggtgtgcaccatgtcagtattcagctggatctggaatca
ctctttcaattcagtcatcttattctttcctttaagactttccgtcccgcggcaatgctt
gtggagaagtcatcagattctggtcaaacatggaaagtcctgcgatactttgcatatgat
tgtgctcgctcctttccaaatattcctactgcaccagcacaaagagtgaacgacgttata
tgtgaatcaaaatactctgaccttgaaccctctacagatggagaggttgttctgaaagca
ctggatccacatttccaaatctctaatccatacagcccagagatacaagagcaaatatcg
cttaccaatctgcggataaatttcactcaacttcacaccctgggcgatatacgattgcgg
aggcaagccagacccgatgagaagtactactacgctctgtatgaaatggtcgttcgagga
agctgcttctgctatggacatgccagtcactgtgttccagttgataacatcagaggcgat
gttttcagccagcagggaatggttcaaggaaaatgtgtctgtcaacacaatacagatggc
ataaactgtgagaggtgcaaggacttgttcaatgatttaccatggcaaccagctgttggg
acggtgacaaatgaatgcaaagaatgtaactgcaatggacattcggacagatgtcatttt
gacatggctgtgtatttggccagtggacaggtcagtggtggggtctgtgaggaatgtcag
cacaatacaatgggtaataactgtgaccagtgcaggcccttcttctaccaggaccctggg
agatcaatttctgacccatatgcatgtgtcccctgtaactgtgatcccgaaggctcagtg
aacaacgggatgtgtgaaagtcactcagatccacgtcttcgtaccattgccggccgctgt
atctgtaaaagaaacgttgaagggagaagatgtgaccagtgtcagtctgggtacttcggc
ctaagtgctggtaatgctgaaggctgtgaggattgccggtgtgacacacgaggcagtgta
tcatcagaatcagtctgtgacccagtcactggagagtgccactgtctacgaactgtcact
ggaaggaattgtgaacagtgcctgccgacctactggggacttggtagtagtgtctatggt
tgttccccctgtgactgtgacattggaggggcccatgacaacatttgttccccgcaggat
gggcagtgtcgatgtctacccaacattatcagccgtcaatgtaacgaaccagtgcctggt
tactttttccctccgctggattactacttgtatgaagctgaacttgcgcaacacttaggc
agtggtgcttcttccagggtgaggccaacgtctatgcctttatgtgatcagtattatcga
cagcaaggctacagctttcgggtggatcaaggcagactaatacttgagaagattgcaaaa
cgtcatctgcgtcgacagaggaagaggcaaacagtgaatccagatttccaggtacagatt
gtttccagggaagctactcctgatcgacctgctacttggacaggcctgggatttgcccgt
gtaccaaatggaatgggattgcgattcactattgacaatattccatatccaatggatttc
acagctgccattcactatgagacagagtcaacagaggattggacagcctacattcgcatt
cagccaagagatcagcaacaatggagccagtgcagaaataacttgccctcacaggatggt
tatacactcaccatgccaggcacagccagaatagcaattcttcaaacccccatctgtctg
gagccacaagtacagtatattgtggatatttacttcaatcacttctcttctcggaccagc
aatcacatcttgatcgattctttgggtttgattccaaggattaattccctagagaatttt
tgcactgagtcagacttgaatgagtacagaagatacgaatgtgttgagattgcctctcag
ttgggaccccagaccctgccagaagtgtgtgagaaactgatagccagcatgtctgctcga
atccacaatggagctgttgcctgccgctgtgaccctgaggggtcaatcagtcccatttgc
aggaagtttagtggtcagtgccagtgtaagcagggcgtgatcgggcgatgctgtgactcc
tgtgcaccaggattttacggatttggggccagtggctgttcagcctgttactgtgaccat
caaggatctgccaattccatctgtgatcaggtaactggacagtgcggttgccgcaggaat
attgttaatcgtgcttgtgaccgttgccagcctggatattatggattcccaaactgtcag
ccctgtcaatgcaacggctattctgagagctgtgatccttggacaggggcttgtcagaac
tgcggggccttcaccactggccctaactgcgagcgatgcagtgaaggcttctatggaaac
cctactttaaatgaaccttgtcagccctgtcggtgccctgatattcctaacagtggacac
tattttgcccattcctgttatgaagaccctcagattcaacaatggatttgtaactgcctt
gaaggctatgcaggaattcactgtgacagatgttcccctggcttctacggagatcgctgt
ctgccttgtagctgcaatgataacatagacagaagagatacaggggcttgtgaccagtgg
actggcgagtgtctgaaatgcctgtatgatacctacggagaaaactgtcagctgtgcagg
cccggatattatgggtcagcagtgaacaaggattgtagagagtgttcttgcaatggcatt
ggagtcgacggaaagcactgccttcccgatggtttatgtacctgtgatcaagggaccggt
cactgcccatgcttgccttctgtggtaggaagcaactgcgaggaatgtgctccaggtttc
tggaacctgaccagtggaagcgggtgtgaaccctgtcactgcgacccacagaattctgcc
agctctccgtgtgatgagcttactggacaatgccagtgcaaagatggctacggggggagg
acatgttctgaatgtcaggataattattttggcaatccaaagatccagtgtaacccatgt
aactgcaactttggaggtacaaaaaggcctgcatgcaacaagacaacaggaatctgtaac
tgtcgtgaaggggtaacaggaaaacactgcaacaaatgtgcctggggttactgcaaagag
tttccaacatgcacacagtgtcacccttgctttaacctgctggatgaagagatctgtagc
ctcatcccagtaatagaaggactatccaacaaaagcacagcacacagcaacaaactagga
ccttcctatgacaaacagttgaaaaaactcgaaaagaaaattgctgaagttgccaaaatt
ctgaacagctcagttgcttccccggaaacatttgaaaagacaaaggattattttgaaaag
atcaggaaaatccaaatgcagattgatccaaatgtgaatatttccaaagacacgaaggag
cttaacagagttatcgacgatattaatatggaagttgacaagctcaataaggaattgaat
cgcttgaaacagaagccagcgataaggaatgtgaatggcaactttgaagacattaaaatg
tcctaccaaatttcaaaagactctcaacagaaagcaaatgtttcagaattagtgagtatc
tcagaatctacaagaaaggatgcaactgccttgttaaacaatacgttattgatttataac
gacgaacttaatgcactgaggcaaaaaactgaacttttggatttgacaaaggcaaacaaa
ctgatatgtggagctcagggtaacctgtcctgtgataaagatccatgtggaggagcttta
tgtcgtgatgattttggaaataaaatatgtggtggccaaggctgtaatgatttattgttt
atggcaagtgttacgaaaaacaacgctgaaagaacaagtgatcagatgacccaactcctt
aataaaatgctgaatacaataagcaagcttgattctatcagaaacagaacacaagaaact
aaagagaaggcgaccaagttattaggcaagttaggcaaaaccaaggacgaacttgaaagg
gaaaagcaagaaactaaagacatcatcagaaaagtgaaagagtttctcacagctgatggt
gtttctcctgaggatcttgaagcagttgtgaaccatgtcctttccatcaagttacccgtt
actcctgaggaagtgaagaacaaaacaaagcaaattcaggacattctttctgagattaaa
gatgttgataaagaagtggaaaggctaaataaccgctctcaagaagcaaagttacttttg
aagcgtgcaatgaaagctgagaaaagagctcaagagattccaagcacaaaagaactgcag
aaagaactggacaagataaaagaagtacaacgaactgttacaggaacagtgaatataatc
acaagggatctaaatagtgcaaaaacaaaaatttcacaggttaatgacaaaatcagatca
atttctgacaatctcatgaatctcatgaacaatatagctaagttccaaaatgacattgaa
ggactaagaaagaagacagaaaacaacaagatagcaagtaaaaaggcaatggaaaaagcg
aatgaagccaagacgaatgctgatgaggctgaacaagaatttaaaacattgaatgaggca
tatgtgaaattaaccagtctgagcatacaagagattccaaaagatggaaaacaaaaagca
gaagaattactgcgagaggcaagtgatctggcaaaagacttggaaagcaaactgaggagg
attacagaactggaagagcagatgaaggacagaaatagaaaactgaaagaaaactcagat
tatttgtccaaattagaagaaaatgtgacaagtattaaagagtttattgaggagaagatc
atcttctacaataactgtctaccataa
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integrated database retrieval system