Hemitrygon akajei (red stingray): 140738658
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Entry
140738658 CDS
T11019
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04510
Focal adhesion
haka04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
140738658 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
140738658 (lamb1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
BNR_6
Gp_dh_C
Motif
Other DBs
NCBI-GeneID:
140738658
NCBI-ProteinID:
XP_072922379
LinkDB
All DBs
Position
14:67619080..67708016
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AA seq
1782 aa
AA seq
DB search
MLLFGSLSIWVTLWHCVLSQEPVYSYGCAEGSCYPATGDLLIGRADKLSATSTCGLHKPE
PFCIVSHLQEEKKCFSCDSRTPFAENQNSHRIANVVTTFAHNRLNTWWQSENGIENVSLQ
LDLEAEFHFTHLIMTFKTFRPAAMMIERSSDFGKTWQVYRYYAYDCEASFPGISAGSLKK
VDDIICDSRYSDIEPSTEGEVIYRVLDPAFKIEDPYSRRIQNMLKITNLRIRFTKLHTLG
DNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECAPVHDSDDQDIEGKVHGRCVCRHN
TKGLNCELCQDFHQDVPWKPAEGRNSNACRKCNCNGHANKCHFDMAVYLASGNVSGGVCD
GCRNNTMGQHCEQCKPFYYQHPERSIRASDICEPCNCDPAGSLNGGICDSHTDLAANLIA
GQCRCKLNVEGERCDLCKEGFFGLSADEALGCQPCACNHLGTHPGGSPCDDVTGNCFCKR
LVMGKNCDQCLPQHWGLSNDLDGCRPCDCDLGGSYSNDCSSETGQCPCKEHMAGRRCSEV
ESGFYFIALDHYTYEAEGAHLGPGVTVIQRQYPQDRSPTWTGIGFGRVPEGAYLEFHIND
IPYSMEYDVLIRYEPQLPKNWEEAKITVLRPGAIHTGSRCVNTIPDDDNQVFSLPSGSRY
VVLPRPVCFEKGLNYTIRLELTKYSSDDEMDTPYIFIDSLVLMPHCRSLDIFSTGESGEI
VTNSMWDTFQRYRCLENSQSVTKTPMTDVCRGILTSISSIIHEGALPCNCDPQGSLSSVC
NPNGGQCQCRSNVVGRNCDRCAPATYGFGPSGCRPCECNLEGSINEFCHQATGYCLCKDG
VYGQRCDQCQPGFWGFPSCRPCQCNGHADHCDLETGECLNCRDHTSGQNCESCLAGYYGD
PVLGSGDHCRPCPCPDGPSSERQFSAGCYQDLYSGNVVCLCQTGYTGARCDECASGFYGN
PNETRGSCQECRCNNNIDVTDPESCDKSTGECLKCLYHTEGESCNLCKPGYYGNAELQNC
IKCVCNSLGTVQTQCPSADECHCNQTTGQCPCLSNVVGLTCDHCAPNTWKLASGTGCELC
NCNEVHSRTSSCNEFTGQCQCMAGFGGRTCSDCQEFFWGDPDVECLKCNCNELGIETRQC
NQTDGHCVCREGITGERCDRCARGYFGTFPHCEQCHACFSLWDKKIEELTAQSKRLVEQA
DAIKANGVIGPYQETVNAVQDKINEIQSLLAANPATEPLDNIEQLLEEAKKKVIHLAVKV
NGIESDLATTEDQHNVTVAELNDLQSDTEGVKAIVSELAERLEYIKNSDIHGALDSVQKY
HEQSVEAEIKVNASTTDPDNILLQSSTIRQKVDEMITQNEEHFEEQQKEHSESLEELAKK
LQDLDLSPLSEKVCGSPAGISCEEAKCGGPSCRTEDGNRKCGGPGCDGLVTLAHNAWQNS
MDFDTEILNALAEVDQLSKMVTDAKVKADEAKLNAQKVLLKTNATKEKVDKSNEDLRNLI
KQIREFLTQDGADLESIEAVANEVLKLEMPTTPQQLQNLTNDIRDRVESLSDVEVILNQS
AADIQRAEALLDEARRSRTHATDLKVTADRVKEALHEAERAQNSATKAIKQANEDIEGTQ
DLLTSIESETFASEQSINNATLRLAQIEKDISDLKQKTAENSNAAENIGETAERVKQAAT
EAKQVLDTVLKEKYSFAEENVEKKTHAASDAQQKAKMLQKEAESLLTDASRKLELLKKLE
KSYEENQKALEEKAQQLVKLEEDVRTLLQTISQKVAIYSTCL
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atgttgctcttcggaagtttaagtatttgggtcaccctttggcattgtgtgctctctcaa
gagccagtatacagttatggctgtgctgaaggaagttgttatccagccacaggggatctg
ttgattgggcgagctgataagctctctgctacctccacttgtggtttacataaacccgag
cccttctgtattgtcagccaccttcaggaagaaaagaaatgcttttcatgtgattcgcgg
actccttttgccgaaaatcagaacagtcacagaattgcgaatgtggtcacaacttttgct
cacaatcgactgaatacctggtggcagtctgaaaatggcatcgaaaatgtttcccttcaa
ctggatctggaggctgagttccactttacccacctcattatgactttcaagacgtttcgt
ccggctgctatgatgattgagcgatcttcagattttgggaagacttggcaggtgtacagg
tattacgcttatgactgtgaggcatccttcccaggtatttcagcaggatcattgaagaaa
gtggatgacattatctgtgattctcgctactccgatattgaaccttctacagaaggagag
gtcatttatcgtgtgttggatccagcctttaaaatcgaagatccttacagccgaagaata
caaaatatgttgaagatcactaacctgaggataaggttcactaagctccatactttgggg
gacaacttactagactcgcgaatggaaatcaaagaaaaatattactatgctatctatgac
atggtggttcgaggcaattgtttctgttatggacatgccagtgaatgtgctcccgttcat
gattctgatgatcaagatattgaagggaaggtacatggtcgatgtgtgtgtcggcacaac
actaaaggtttaaactgtgagctgtgtcaagatttccaccaggatgtaccttggaaacct
gctgaaggacgcaacagcaatgcttgtcgaaagtgtaactgcaatggacatgccaacaaa
tgtcactttgacatggctgtgtatttagcctctggtaatgttagtggtggtgtttgtgat
ggctgtcggaataatacaatgggacagcactgtgaacaatgcaaacctttttactatcag
catccagaacgaagtattcgtgccagtgacatctgtgagccttgtaactgtgacccagct
gggtcactgaatggtggaatctgtgacagtcacactgatctggcagctaacctcatagca
gggcagtgtcgctgtaaactaaatgttgaaggggagcgctgtgatctgtgcaaagagggc
ttcttcggactaagtgcagatgaagcactgggatgtcaaccatgtgcttgtaaccatttg
ggaactcatcctggaggatctccatgtgatgacgtcacagggaattgcttctgtaaacgt
ctggtgatgggcaagaactgcgatcaatgtctgcctcagcactggggactgagcaatgat
ctggatgggtgtcgcccttgtgactgtgacctagggggctcctacagtaatgattgttca
tccgagacaggccagtgtccatgtaaagagcatatggctgggcgtcgatgcagtgaagtt
gaatccgggttttactttattgcactggaccattacacatacgaggctgagggagctcac
ctgggtccaggagttactgtaatacagcgacaatatccacaggatcgatctccaacctgg
acaggaattggatttggacgtgttcctgagggagcgtatctagaattccacataaatgac
attccatattcgatggaatatgacgtattgattcgctacgaaccacagctgccaaaaaac
tgggaggaggcaaaaataacagtgttaagacctggtgcgattcatactggcagtcgatgt
gtgaatactattcctgatgatgacaaccaagtcttctctttaccatcaggatccaggtat
gtggttcttcctcggcctgtgtgcttcgaaaaaggactaaactacaccatccggttagaa
ttaacaaaatattcttcagatgatgaaatggataccccttatatcttcatagattcgctg
gtactcatgccccactgcaggtcattggatatattttctacaggagaatcgggcgagatt
gtcacaaacagcatgtgggatactttccagcggtaccgctgccttgagaacagtcagagt
gttaccaagactccaatgactgatgtctgcagaggcattctgaccagtatttcttccata
atccatgaaggagctctgccatgtaattgtgaccctcaaggctctctcagttctgtttgc
aatccaaatggtggacagtgtcaatgccgttccaatgtagtcggccgaaactgtgaccgc
tgtgctcccgccacatacggttttggtcctagtggctgcaggccatgtgaatgtaatcta
gaaggttctatcaatgaattttgccatcaagctaccggctattgtctgtgtaaggatgga
gtctatggccaacgatgtgaccagtgtcagcctgggttttggggatttcctagttgccgc
ccatgccagtgtaatggacatgcagatcattgtgacttggaaactggcgaatgtttgaac
tgcagagatcatacaagtggacaaaactgtgagagctgcctggcaggttactatggagac
cctgtacttggctcaggtgaccattgccgcccatgtccttgtccagatgggccaagtagt
gagcgacagttttctgctggctgttatcaggatctttattctggcaatgttgtttgcctc
tgtcaaactggatacacaggtgctagatgcgatgaatgtgcatctgggttttatggtaac
cctaatgagaccagaggatcttgtcaggagtgtcgttgcaacaacaacatcgacgtgact
gacccagagtcctgtgacaagagcactggcgaatgtctaaagtgcctgtatcatacagaa
ggtgaaagctgcaacctctgcaaacctggctactatgggaatgctgaactgcagaactgc
ataaagtgtgtctgtaattccttggggacagtacagacccagtgcccctctgcagatgaa
tgccattgtaatcaaaccactggtcagtgtccttgcctttctaatgtggtcggtctgaca
tgtgatcactgtgcacctaatacctggaagctagcaagtggaactggttgtgaactctgc
aattgcaatgaagtccactcgcgtacatcatcctgtaatgagtttacaggacagtgtcag
tgcatggctggatttggaggacgaacttgcagcgactgccaggaattcttttggggagat
cctgatgtggaatgtttgaaatgcaattgtaatgaacttggcatcgagacacggcagtgt
aaccagacagatgggcactgcgtctgtcgagaagggattactggtgaacggtgtgataga
tgtgcccgagggtactttggtacattccctcactgtgaacagtgccacgcatgcttcagt
ctctgggataaaaaaattgaagagctgaccgctcaaagcaaacgacttgtggagcaggct
gatgcgatcaaagccaatggagttattggcccttaccaagaaactgttaacgctgtgcag
gacaagattaatgagatacaatctctgctcgctgcaaatcctgcaacagagccacttgac
aatattgagcagcttttggaagaagccaagaagaaagtgattcatcttgcagtaaaggtg
aatggaattgaatcagatcttgcaacaacagaagaccaacataatgtgactgtcgcagaa
ctaaatgatcttcagagtgacactgagggcgtaaaagctatcgtgagtgaactagcagag
cggttggaatacattaagaactctgatatccatggagccttggacagtgtccagaaatac
cacgaacaatctgtagaggctgaaataaaagttaatgcttccaccactgatcctgacaat
atattgctgcagtcttccaccattcgacaaaaagtggatgaaatgatcacacaaaatgag
gagcattttgaggaacagcaaaaggagcattcagaaagtttggaagaattggctaagaaa
ttgcaggatctagacctttcaccattaagcgaaaaggtttgtgggagccccgcaggaata
tcttgtgaggaagcaaagtgtgggggcccaagctgtcgcactgaggacggaaataggaag
tgtggaggacctggctgtgatgggcttgtaactttggctcataatgcatggcagaattct
atggattttgatacagaaatcctaaatgctttggcagaagtggatcagctctctaaaatg
gtcactgatgcaaaagttaaagcagatgaggctaaactcaatgctcaaaaagtcctgtta
aaaacaaatgccacaaaggaaaaagtggataaaagcaacgaagatttgagaaatttaatc
aagcaaatcagagaatttcttacacaggatggtgctgatctagagagcattgaagcggtt
gccaatgaagtattgaaattagaaatgccgactactcctcagcagcttcagaacctgacc
aatgacattcgtgaccgggtggagagtctctcagatgtagaggtgatcctaaaccagagt
gcagcagatattcaacgagcagaagcactattggatgaggccaggaggtccagaactcat
gcaacagatcttaaagtcacagctgatcgtgtaaaggaggccctacatgaagctgagagg
gcacaaaattcagcaacaaaggccatcaaacaagctaatgaagacatcgagggaacacaa
gatctgctgacctcaattgaatctgagacgtttgcatcagaacaaagtatcaacaatgct
actctgcgcttagcacagattgagaaagatatcagtgacctaaagcaaaagactgctgag
aattcaaatgctgcagaaaacattggagaaacagcagagcgggttaaacaggctgcaact
gaggccaaacaggttcttgacacagtccttaaagaaaagtacagttttgcagaagagaat
gttgagaaaaaaacacatgcagcttctgatgctcagcagaaagcaaagatgctgcagaaa
gaggccgaatcattgttaacagatgcaagccgaaagttggagttattgaagaaactggaa
aaaagctatgaagaaaaccaaaaagccttggaagaaaaggcacagcagttggtaaaactg
gaagaagatgtacgcacattgctgcagacaatcagtcagaaagttgccatctatagtact
tgtttataa
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integrated database retrieval system