Hemitrygon akajei (red stingray): 140739088
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Entry
140739088 CDS
T11019
Name
(RefSeq) transcription factor SOX-30-like
KO
K09271
transcription factor SOX15/30
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haka03000
]
140739088
Transcription factors [BR:
haka03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
140739088
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
140739088
NCBI-ProteinID:
XP_072923135
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Position
15:complement(83787269..83829661)
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AA seq
549 aa
AA seq
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MTEKIKIEDEHYKLSSSNRGTQQTKDLLFLKDLNGTDRSQQTDLKLPITLHTLPPGIKLQ
LQGSPSTCEVVKFTKLPGPLATNNISDIRLQTQVDPSLKINTINVPLTVPPTEAEINDMP
PSKDRSGHIKRPMNAFMVWARIHRPQLAKANPNANNAEISVQLGLEWNKLTEEQKKPYYD
EAQKIKEKHREEFPGWVYQPRPGKKKRFALGVPSNAFPGSGQTIVSTAPATIYPYRPATY
SVVVPNLQANVNRPSVIAGQNQSLRVPVTQGPRPSSIILYPQTSPVQVGLSAQNISSHPA
VPVTCPPGHSRSEVHHKVSSPSAVSNCTEQRISTMSVNVGKRNSSSETNNTHNRDAMPEV
PTQKEIPAVNNCPRNPPALPSATLPHPHAYQHPPMGHAANLFGAAARFPFHHPYFLPGPP
YFPSSTCPYSRPPYGYGDFANSISECLGYYEDRYQKHEAMFSALNRDYPFREYPDDCQRS
ADSRSNSSIEEGPHPNNLGGEEYLSSMPELDVGALENVFTTPMSAPSQPQRVEMAHSDDE
QEGKILKSL
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaagataaaaatagaagatgagcattataaactttctagttccaacagggga
actcagcagactaaagatttattattcctgaaggatctgaatggaacagataggtcacaa
caaacggatctgaaacttccgataactttgcacacacttccacctggaatcaaactgcag
cttcaaggttcgccttcaacctgtgaagtggtcaaattcaccaaattacccggaccacta
gcaacaaacaatataagtgacattagattacagacacaagtggacccatccttgaagatc
aacactataaatgttcctcttaccgtgcctcctactgaagcagaaatcaatgatatgcct
ccttccaaagacagaagtgggcacataaaacgcccaatgaatgcttttatggtttgggca
cggattcacagaccacagttagccaaagcaaacccaaatgctaataatgctgaaattagt
gtccagcttggcctggagtggaataagttaactgaagaacagaagaaaccttattatgat
gaggctcaaaagataaaagaaaagcacagggaagaatttcctggttgggtgtaccagcca
cgaccagggaaaaaaaaacgatttgcattgggtgttccttcaaatgcctttcctggtagt
ggtcaaaccattgtttctacagctccagcgacaatttatccttatcgaccagccacctac
tcagtagtagttccaaatttacaggcaaatgttaatcgaccatcagttattgcaggtcaa
aaccagtctctgcgcgtgcctgttactcaaggtcctcgtcccagttcaattatactttat
ccacaaacaagtcctgtccaggttggtctgtctgcacaaaacatttccagccaccctgct
gtgccagtcacttgtcctccaggacacagtaggagtgaggtgcatcacaaggtatctagt
ccaagcgcagtatctaattgtacagagcaaaggatatctacaatgtcggtgaatgttggc
aaacgaaattcttccagtgaaactaataacacccacaacagagatgcaatgcctgaagtc
ccaacacaaaaggagatacccgctgtgaacaactgccccagaaatccaccagcactacct
tcggcaactctcccgcatccgcatgcttaccaacacccaccaatgggacacgctgctaat
ctgttcggagctgctgctcgatttcctttccaccacccatactttttgcctggaccgccc
tactttccttcaagtacttgtccttatagcagaccaccctatggttatggtgactttgca
aacagcatatcggaatgcttaggctactatgaggatcgataccagaagcacgaagctatg
ttctcagcgctgaatagagactaccctttcagggagtacccagatgactgtcaacgcagt
gcagactccaggagcaatagcagcattgaggaagggccccaccctaataacttgggagga
gaggagtacctgagctccatgccagagctggatgtgggcgcattggagaatgtgttcaca
actccaatgtctgctccctcacagcctcagagagtggagatggcccacagtgatgatgaa
caagaaggaaaaattttaaaaagcctgtag
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