Hemitrygon akajei (red stingray): 140739189
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Entry
140739189 CDS
T11019
Name
(RefSeq) PDZ and LIM domain protein 4-like
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
140739189
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
haka04990
]
140739189
Domain-containing proteins not elsewhere classified [BR:
haka04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
140739189
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
140739189
NCBI-ProteinID:
XP_072923339
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All DBs
Position
15:complement(16127596..16234765)
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AA seq
330 aa
AA seq
DB search
MPHPVTLYGPSPWGFRLVGGKDYSQPLTISRVTPGSKASSANLCPGDIIVAINEDSTENM
NHLDAQNKIKACTDQLTLSINRHENKPWSPNGFEDVNAQSFKSNFQAPPQDCRPTGSPNN
RKPTPFTVGANINETKPFASTQYNTPAALYANDNIDHTLPEQLSGLHVASPQYTEPSKVS
PKLWNEVDTESDVYKMLRDGEEPPSEPKQSGSFKMLQGMLEAEQTGDKSERPAAIKSIKS
PVSKFSNAPPTLQKLPQCTRCETGIVGAVVKAREKLYHPACFMCSDCGLNLKQKGYFFIE
EQLYCETHAKARVQPPEGYEVVAVYPNSRV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgccacatcctgtgactctttacggaccgtcaccttggggctttagattagtaggaggc
aaggactatagccaacccttaacaatttcacgggttactcctggaagtaaggcatcctca
gcaaatctgtgccctggtgatataattgtagctatcaatgaagacagtacggagaatatg
aaccatcttgatgcccagaacaagatcaaggcctgtactgaccagctcacactttccatt
aacaggcatgaaaacaaaccctggtccccaaatggttttgaggacgtaaacgctcaatct
ttcaaaagcaatttccaagcacctccacaggactgcagacccacagggagtccaaataac
agaaagccaacaccatttacagttggtgcaaatataaatgaaaccaaaccgtttgcaagt
acacagtacaacactcctgctgcattgtatgccaatgacaacatagaccacactctgccg
gaacaattaagtgggcttcacgttgcctctccacagtacactgagccatcaaaggtgtct
ccgaaattgtggaatgaagttgacactgaatcggatgtttataagatgcttcgggatggc
gaagagccaccatcagaacccaagcagtcaggatctttcaagatgctgcagggcatgttg
gaggctgaacagacaggtgacaaaagtgaaaggccagctgccatcaaaagtataaaatcc
cctgtatcaaaattcagcaacgctccacctacactacagaagttaccacagtgtactaga
tgtgagaccggcatagttggtgctgttgtcaaggcacgggaaaagctatatcatccagcg
tgcttcatgtgttctgactgtggattaaatctaaaacagaaaggatacttcttcattgag
gagcaactatattgtgaaacccacgccaaagcaagagtgcagcctccagaaggttatgaa
gttgtggctgtatatcccaactccagggtgtaa
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