KEGG   Hemitrygon akajei (red stingray): 140739251
Entry
140739251         CDS       T11019                                 
Name
(RefSeq) protocadherin-1-like isoform X1
  KO
K16498  protocadherin delta 1
Organism
haka  Hemitrygon akajei (red stingray)
Pathway
haka03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:haka00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    140739251
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:haka01009]
    140739251
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:haka04515]
    140739251
Protein phosphatases and associated proteins [BR:haka01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     140739251
Cell adhesion molecules [BR:haka04515]
 Cadherins
  Protocadherins
   140739251
SSDB
Motif
Pfam: Cadherin Protocadherin Cadherin_CELSR2_9th Cadherin_2 TMEM154 RET_CLD1 Sema4F_C Cadherin_4 Syndecan LAX MLANA EphA2_TM
Other DBs
NCBI-GeneID: 140739251
NCBI-ProteinID: XP_072923485
LinkDB
Position
15:34555194..35050684
AA seq 1266 aa
MRGRERRRERGWKRKRERGWKRNREKASGQRQAQREKKKQAKLPDPMLQAFALLLTHSLA
ELAAHLLTPMARPLAPSLRGLLLLLPLLVALYPVPGCVAQGSVKFTFPEEQPPNTLIGNP
GETLGLERENRLFKLETGQPYLRVDETGGNLYTTETPIDREQMMCESPTECQLEFEISVT
DTMYNAATVLVEGKISVQDINDNTPTFSSPVISISIPEHTPPGTLVNIPTASDRDAGTNG
VAGYELLGNEGQGLFSLQVAEEHGEKLPQLIVTGSLDREQRDTYDLTVRVVDGGQPPRSS
TSVLRVTVLDINDNAPHFERYAYQGTVEENSPAGTSILQVRATDVDMGENSRIEYTFAQA
ADNARRLLRLDKNTGWITVQGSVDREQFSQFRFYVHARDKGPIPKQDRASVVITVRDTND
NAPAIDIRGIGLVTHRDGVASIDEDAPVDSPVALVQVSDRDEGENAAVTCIVAGDVPFQL
KPASESSSEKKKKFFLQTTTALDYEKVREYLIQIVAVDSGNPPLSSTNTLKVKVVDVNDN
APSFAQSRMQVGILENNRPPTSLLRVEATDADSGSNAELLYSLYPDPTIQNLFQINPDTG
EVRAISVLDRELRERYEFKVAAADKGTPSLKGTATVVVNVLDENDNDPRFMLNAYNFSVR
ENLPPSSPVGMVTVTDLDKEANARFTLFVEPDNGEFEIQNGTGTILSRVSFDRERQSTYT
FQLKAIDGGMPPRSAYVSVIINVLDENDNTPFITQPSNSSFQHISPLTPIGTLVERVKAE
DMDIGPNANLTYEIVGGNPFDLFRISAVGNVTLEKELMRRHYGLHRLVVQVRDGGTPARF
ATALVHLYVNDTMANVSLVEALVGHSLNTPLNVDIAGDPEYEKSKQRSNVLFGVIAGIIA
VTLVIVVVVLIRYCRQKEAKSGYQAGKKETKDLYTPKQTSKNTKHKVKKSKPSKPSKPLD
VEESGAQRGLQFNLINESSTDSPRIHLPLNCNPGSPDLGRHYRSNSPLPSIQLHPQSPTA
GKKHQVVQDLPAANTFVGTGDSNSTGSDQYSDYSYKTNPPKYNKQLPHRRVTFSTANQSQ
DLQDPSQHSYYDSGLEESETPSSKSSSGPRLGPLALPEDHYERTTPDGSIGEMEHPENDL
RPLPDVAMTGNCTRECTEFGHSDTCWMPGQPSPNRKQKNVPKLSTFVPYEERGSQDRLTN
GSPRITEDRNAKMANIRFIPTHSAFPGSNHEPSKDSTLEEIPLTQPPDYQQAPGPAPQNS
KREIYL
NT seq 3801 nt   +upstreamnt  +downstreamnt
atgcgagggagggagagaaggagagagagagggtggaagagaaagagagagagagggtgg
aagagaaacagagagaaagcgagcggacagcgccaagcacagagagagaaaaaaaaacaa
gcaaaactcccagacccaatgctgcaggctttcgctttgctactgacccactctctcgcc
gagctggcagcgcacttgttgacgccgatggctcggccgctcgccccctcccttcgcggc
ttgctgctcctgttgcccctgctcgtcgccctgtacccggtccccggctgcgtggcgcag
ggctcggtgaagttcaccttcccggaggagcagccgcccaacacgctgatcggtaacccg
ggcgagacactgggtctggagcgagagaaccggctattcaagttggaaacgggccagcct
tacctccgggtggacgagacgggaggcaacctgtacaccaccgagacccccatcgaccgc
gagcagatgatgtgcgagagccccaccgagtgccagctcgagttcgagatctcggtcacc
gacaccatgtacaacgctgccacagtgctcgtggaaggcaagatttcggtgcaggacatt
aacgacaacactcccacgttcagctccccggtcatctccatctccattccggaacacaca
cctccgggaactctggtcaatatccccacggccagcgaccgcgacgccggcactaacgga
gtcgccggctacgaactgttaggcaacgagggacagggtctgtttagcctacaggtggcc
gaggaacatggcgaaaagttgcctcagctgatcgtcaccggctcgctggacagggagcaa
cgggacacttacgatttgactgtgcgggtggtagacgggggtcagcccccccggagcagt
acttcggtgttgcgggtcaccgtgctggacattaacgacaacgcgccccacttcgaaagg
tacgcctaccaaggcacggtggaggagaacagccccgccggtacctccatcctgcaggtg
agagctaccgatgttgacatgggagagaactcccgcatcgagtacacgttcgcccaggcg
gcggataatgcccgccgcctactccgcctggacaagaacaccggctggatcacggtgcag
ggatcggtggaccgcgagcagttcagccaattcaggttctatgtgcacgcccgcgacaag
ggtcccatacccaaacaggacagggcgtcggtggtgatcacggtgcgggacacgaacgat
aacgcgccggcgatcgacatccgaggcatcggtctggtcactcatcgggacggcgtggcc
agcattgacgaggacgcgccggtcgactcccccgtggctctcgtccaagtgtcggaccgc
gacgagggggagaacgcggcggtgacttgtatagtggccggggacgtccctttccagctg
aaacccgccagtgagtcgagcagcgaaaagaagaagaagttcttcctgcagaccaccacc
gcccttgactacgagaaggtgcgcgagtacctgatccagatcgtggcagtggattcgggc
aaccctcctctttccagcaccaacactctgaaggtgaaggtggtggatgtgaatgacaac
gcgcccagcttcgcgcagagccgcatgcaggtggggatcttggagaataaccggcccccg
acctccctgctgcgtgtggaggccacggacgccgacagcggaagcaatgccgagctactc
tactccctatatcccgacccgaccatccagaacttgttccagattaacccggacacgggc
gaggtgagagccatctcggtgctggaccgcgagctgagggagcgctacgagttcaaagtc
gccgccgccgacaaggggacccctagtctgaaggggacagccaccgttgtggtcaatgtg
ctggacgagaacgacaacgatccccggttcatgcttaacgcctacaacttttcggtgcgg
gagaacttgcccccgtccagtccagtgggcatggtgacggtgacggacctggacaaggag
gcgaatgcgcggttcaccctgttcgtagaaccggataatggcgagtttgagatccagaac
ggcacgggtaccatactctctcgggtctccttcgaccgggagcgccagagcacctacact
ttccagctgaaggcaatagacggcggaatgccccccaggtcagcctatgtcagtgttatc
attaatgttttggatgaaaacgacaacacacccttcatcacccaaccatccaattcctcc
ttccaacacatcagtcctctcacccccattggcacactagtggaacgagtcaaagccgaa
gacatggacattggccccaatgctaacttgacttatgagatcgttggaggtaaccccttt
gacctgttccgcatctccgctgtcgggaacgtgaccctggagaaggaactcatgcgcagg
cactacgggttgcaccggcttgtggtccaggtgagggatgggggcacgccagcccgcttc
gccaccgctttggttcacttgtatgtcaacgacaccatggccaacgttagcctggtggaa
gctctggtgggccacagcctcaacaccccgttgaacgtagacatcgccggagaccccgag
tacgagaagagcaagcaacggagcaacgtcctgttcggagtgatcgctgggattatcgca
gtcacgctggtgatcgtggtggtggtcctgatccgctactgtaggcagaaggaagccaag
agtggataccaggccggcaaaaaggaaaccaaggatttgtacacacccaaacagaccagt
aaaaataccaagcacaaagttaagaaaagcaagccgtccaaaccctccaaacctctggac
gtcgaggagagcggcgcccagaggggattacaattcaacttgatcaacgaatcgagcact
gacagtccacggattcacctgccactgaactgtaacccgggtagccccgacctagggaga
cactacaggtcgaactctcctctcccttccatccagctacacccgcagtccccgactgcg
gggaaaaagcaccaagtcgtacaagacctgcccgcagccaacaccttcgtcgggactggg
gacagcaactctactggctcggaccagtactcagattacagctacaagaccaatccgccc
aagtacaacaaacagcttccgcatagaagagtgaccttctcaacagccaaccaatcacag
gacctccaagacccctcccagcacagttactatgacagtgggcttgaggaatcagaaacg
ccaagcagcaagtcatcctccgggccacggctgggaccacttgcgctgcctgaggaccac
tacgagcgcaccactccggacggcagcatcggagaaatggagcacccagaaaatgatctt
cgaccactgcctgacgtggctatgacggggaactgcacaagggaatgcacagagtttggc
cattcagatacctgttggatgccaggtcaaccatcccccaacaggaagcagaaaaatgtc
cccaaactgtccacttttgtgccttatgaagaacgggggagccaggatcgtctgaccaat
gggagccctcggatcactgaggaccgtaatgccaagatggccaacatccgcttcataccg
acgcatagtgccttccccggttcaaaccacgagcccagcaaggattcgactctggaagaa
attccactcacccaaccccctgactaccaacaggcccccgggcctgccccccagaattcc
aagcgtgagatttatctctag

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