Hemitrygon akajei (red stingray): 140739251
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Entry
140739251 CDS
T11019
Name
(RefSeq) protocadherin-1-like isoform X1
KO
K16498
protocadherin delta 1
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
140739251
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
haka01009
]
140739251
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
haka04515
]
140739251
Protein phosphatases and associated proteins [BR:
haka01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140739251
Cell adhesion molecules [BR:
haka04515
]
Cadherins
Protocadherins
140739251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
TMEM154
RET_CLD1
Sema4F_C
Cadherin_4
Syndecan
LAX
MLANA
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
140739251
NCBI-ProteinID:
XP_072923485
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Position
15:34555194..35050684
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AA seq
1266 aa
AA seq
DB search
MRGRERRRERGWKRKRERGWKRNREKASGQRQAQREKKKQAKLPDPMLQAFALLLTHSLA
ELAAHLLTPMARPLAPSLRGLLLLLPLLVALYPVPGCVAQGSVKFTFPEEQPPNTLIGNP
GETLGLERENRLFKLETGQPYLRVDETGGNLYTTETPIDREQMMCESPTECQLEFEISVT
DTMYNAATVLVEGKISVQDINDNTPTFSSPVISISIPEHTPPGTLVNIPTASDRDAGTNG
VAGYELLGNEGQGLFSLQVAEEHGEKLPQLIVTGSLDREQRDTYDLTVRVVDGGQPPRSS
TSVLRVTVLDINDNAPHFERYAYQGTVEENSPAGTSILQVRATDVDMGENSRIEYTFAQA
ADNARRLLRLDKNTGWITVQGSVDREQFSQFRFYVHARDKGPIPKQDRASVVITVRDTND
NAPAIDIRGIGLVTHRDGVASIDEDAPVDSPVALVQVSDRDEGENAAVTCIVAGDVPFQL
KPASESSSEKKKKFFLQTTTALDYEKVREYLIQIVAVDSGNPPLSSTNTLKVKVVDVNDN
APSFAQSRMQVGILENNRPPTSLLRVEATDADSGSNAELLYSLYPDPTIQNLFQINPDTG
EVRAISVLDRELRERYEFKVAAADKGTPSLKGTATVVVNVLDENDNDPRFMLNAYNFSVR
ENLPPSSPVGMVTVTDLDKEANARFTLFVEPDNGEFEIQNGTGTILSRVSFDRERQSTYT
FQLKAIDGGMPPRSAYVSVIINVLDENDNTPFITQPSNSSFQHISPLTPIGTLVERVKAE
DMDIGPNANLTYEIVGGNPFDLFRISAVGNVTLEKELMRRHYGLHRLVVQVRDGGTPARF
ATALVHLYVNDTMANVSLVEALVGHSLNTPLNVDIAGDPEYEKSKQRSNVLFGVIAGIIA
VTLVIVVVVLIRYCRQKEAKSGYQAGKKETKDLYTPKQTSKNTKHKVKKSKPSKPSKPLD
VEESGAQRGLQFNLINESSTDSPRIHLPLNCNPGSPDLGRHYRSNSPLPSIQLHPQSPTA
GKKHQVVQDLPAANTFVGTGDSNSTGSDQYSDYSYKTNPPKYNKQLPHRRVTFSTANQSQ
DLQDPSQHSYYDSGLEESETPSSKSSSGPRLGPLALPEDHYERTTPDGSIGEMEHPENDL
RPLPDVAMTGNCTRECTEFGHSDTCWMPGQPSPNRKQKNVPKLSTFVPYEERGSQDRLTN
GSPRITEDRNAKMANIRFIPTHSAFPGSNHEPSKDSTLEEIPLTQPPDYQQAPGPAPQNS
KREIYL
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgcgagggagggagagaaggagagagagagggtggaagagaaagagagagagagggtgg
aagagaaacagagagaaagcgagcggacagcgccaagcacagagagagaaaaaaaaacaa
gcaaaactcccagacccaatgctgcaggctttcgctttgctactgacccactctctcgcc
gagctggcagcgcacttgttgacgccgatggctcggccgctcgccccctcccttcgcggc
ttgctgctcctgttgcccctgctcgtcgccctgtacccggtccccggctgcgtggcgcag
ggctcggtgaagttcaccttcccggaggagcagccgcccaacacgctgatcggtaacccg
ggcgagacactgggtctggagcgagagaaccggctattcaagttggaaacgggccagcct
tacctccgggtggacgagacgggaggcaacctgtacaccaccgagacccccatcgaccgc
gagcagatgatgtgcgagagccccaccgagtgccagctcgagttcgagatctcggtcacc
gacaccatgtacaacgctgccacagtgctcgtggaaggcaagatttcggtgcaggacatt
aacgacaacactcccacgttcagctccccggtcatctccatctccattccggaacacaca
cctccgggaactctggtcaatatccccacggccagcgaccgcgacgccggcactaacgga
gtcgccggctacgaactgttaggcaacgagggacagggtctgtttagcctacaggtggcc
gaggaacatggcgaaaagttgcctcagctgatcgtcaccggctcgctggacagggagcaa
cgggacacttacgatttgactgtgcgggtggtagacgggggtcagcccccccggagcagt
acttcggtgttgcgggtcaccgtgctggacattaacgacaacgcgccccacttcgaaagg
tacgcctaccaaggcacggtggaggagaacagccccgccggtacctccatcctgcaggtg
agagctaccgatgttgacatgggagagaactcccgcatcgagtacacgttcgcccaggcg
gcggataatgcccgccgcctactccgcctggacaagaacaccggctggatcacggtgcag
ggatcggtggaccgcgagcagttcagccaattcaggttctatgtgcacgcccgcgacaag
ggtcccatacccaaacaggacagggcgtcggtggtgatcacggtgcgggacacgaacgat
aacgcgccggcgatcgacatccgaggcatcggtctggtcactcatcgggacggcgtggcc
agcattgacgaggacgcgccggtcgactcccccgtggctctcgtccaagtgtcggaccgc
gacgagggggagaacgcggcggtgacttgtatagtggccggggacgtccctttccagctg
aaacccgccagtgagtcgagcagcgaaaagaagaagaagttcttcctgcagaccaccacc
gcccttgactacgagaaggtgcgcgagtacctgatccagatcgtggcagtggattcgggc
aaccctcctctttccagcaccaacactctgaaggtgaaggtggtggatgtgaatgacaac
gcgcccagcttcgcgcagagccgcatgcaggtggggatcttggagaataaccggcccccg
acctccctgctgcgtgtggaggccacggacgccgacagcggaagcaatgccgagctactc
tactccctatatcccgacccgaccatccagaacttgttccagattaacccggacacgggc
gaggtgagagccatctcggtgctggaccgcgagctgagggagcgctacgagttcaaagtc
gccgccgccgacaaggggacccctagtctgaaggggacagccaccgttgtggtcaatgtg
ctggacgagaacgacaacgatccccggttcatgcttaacgcctacaacttttcggtgcgg
gagaacttgcccccgtccagtccagtgggcatggtgacggtgacggacctggacaaggag
gcgaatgcgcggttcaccctgttcgtagaaccggataatggcgagtttgagatccagaac
ggcacgggtaccatactctctcgggtctccttcgaccgggagcgccagagcacctacact
ttccagctgaaggcaatagacggcggaatgccccccaggtcagcctatgtcagtgttatc
attaatgttttggatgaaaacgacaacacacccttcatcacccaaccatccaattcctcc
ttccaacacatcagtcctctcacccccattggcacactagtggaacgagtcaaagccgaa
gacatggacattggccccaatgctaacttgacttatgagatcgttggaggtaaccccttt
gacctgttccgcatctccgctgtcgggaacgtgaccctggagaaggaactcatgcgcagg
cactacgggttgcaccggcttgtggtccaggtgagggatgggggcacgccagcccgcttc
gccaccgctttggttcacttgtatgtcaacgacaccatggccaacgttagcctggtggaa
gctctggtgggccacagcctcaacaccccgttgaacgtagacatcgccggagaccccgag
tacgagaagagcaagcaacggagcaacgtcctgttcggagtgatcgctgggattatcgca
gtcacgctggtgatcgtggtggtggtcctgatccgctactgtaggcagaaggaagccaag
agtggataccaggccggcaaaaaggaaaccaaggatttgtacacacccaaacagaccagt
aaaaataccaagcacaaagttaagaaaagcaagccgtccaaaccctccaaacctctggac
gtcgaggagagcggcgcccagaggggattacaattcaacttgatcaacgaatcgagcact
gacagtccacggattcacctgccactgaactgtaacccgggtagccccgacctagggaga
cactacaggtcgaactctcctctcccttccatccagctacacccgcagtccccgactgcg
gggaaaaagcaccaagtcgtacaagacctgcccgcagccaacaccttcgtcgggactggg
gacagcaactctactggctcggaccagtactcagattacagctacaagaccaatccgccc
aagtacaacaaacagcttccgcatagaagagtgaccttctcaacagccaaccaatcacag
gacctccaagacccctcccagcacagttactatgacagtgggcttgaggaatcagaaacg
ccaagcagcaagtcatcctccgggccacggctgggaccacttgcgctgcctgaggaccac
tacgagcgcaccactccggacggcagcatcggagaaatggagcacccagaaaatgatctt
cgaccactgcctgacgtggctatgacggggaactgcacaagggaatgcacagagtttggc
cattcagatacctgttggatgccaggtcaaccatcccccaacaggaagcagaaaaatgtc
cccaaactgtccacttttgtgccttatgaagaacgggggagccaggatcgtctgaccaat
gggagccctcggatcactgaggaccgtaatgccaagatggccaacatccgcttcataccg
acgcatagtgccttccccggttcaaaccacgagcccagcaaggattcgactctggaagaa
attccactcacccaaccccctgactaccaacaggcccccgggcctgccccccagaattcc
aagcgtgagatttatctctag
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