Hemitrygon akajei (red stingray): 140739255
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Entry
140739255 CDS
T11019
Name
(RefSeq) protocadherin alpha-C2-like
KO
K16499
protocadherin delta 2
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
haka04515
]
140739255
Cell adhesion molecules [BR:
haka04515
]
Cadherins
Protocadherins
140739255
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
DUF1327
TMEM154
Motif
Other DBs
NCBI-GeneID:
140739255
NCBI-ProteinID:
XP_072923497
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Position
15:complement(39096985..39100420)
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AA seq
799 aa
AA seq
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MATAYGTGAYLIVLLNLIKVAFGQINYSISEELEIGAVVGNIANDLVMDVRELLLRKPQL
ILRGGRQYFEVNTQSGLLFVNERIDREQLCKEVSTCSIRFEIAMVNPDEIFPVEVTILDK
NDHSPIFPTDVIALQLSELLTPGARFPLESAHDPDVGLNSVANYHLSLNDFFSLKIQTRK
GGRKIAELVLQKHLDRETNPYFQLVLTAVDGGNPHRSGTTQIDITVTDINDNAPAFDQDI
YKTRVLENSPVGTLLIKLHASDLDEGLNAEFKYSFSNYASPNVRELFILDAETGEIKING
LLDFETTFDYELDVQAVDNLPNVGHAKVLVTVVDANDNAPDIKLTSVNNLISENATVGSV
IAVFEVTDRDSGENGLVHCQISENIPFKIDTILPNRYKIMTGKKLDREAISQYNISITAW
DAGSPSLTTIETISVSVSDINDNAPHFVQSSYDVYLMENNVPGRSIFSVTALDPDLENNG
DVSYSILENKPQPLSEPSSFAVSSKSGSIFALRSFDYEQVKNFQITILARDAGSPPLSNT
AIVKIIILDQNDNPPIIISPPAWNSSAAFSIVPHSIFPNSLVTKVIANDKDSGQNARLSF
EIIEATDLSLFIVGRHTGEIRTIRSFIADDSTIQNLVVLVKDSGQPSLSSSVTICLSITA
NSSGSPSKPAKNQKNVTYFSDLNIYLIFLFGSTSLIFLLIIILLVVFKCKQDRSNSIYQN
SAACCCCMQRDSNVVFSRRSVRNESQNYYKAGRMLANSDPCHYTVRLSPASSKSDFLFLS
TCQPTLPLNDVSADDLVVK
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgcttatggtacaggggcatatttgatagttttacttaatcttatcaaggtg
gctttcggacaaattaattactctatttcggaagaattagagattggtgccgtggtcgga
aatattgctaatgatctggtgatggacgttcgtgaattattactccgaaaaccacagctg
attcttcgcggggggagacaatatttcgaggtaaatacacaaagcggacttttatttgtc
aatgaacgaatcgacagggaacagctctgcaaggaagtttcaacttgttctattcgattt
gaaatcgcgatggtaaatccggacgaaatatttcccgttgaggtgacgatattagataaa
aacgaccattcgccgattttcccaacggacgtaattgctctgcagctctctgaattactc
acaccaggagcgcgctttcctcttgagagcgcgcatgatccggacgttggtttaaactca
gtcgctaattaccaccttagccttaatgattttttcagccttaagattcagacaaggaaa
ggcgggaggaagatcgctgaactggttctgcagaaacatttagaccgcgaaacaaatccg
tattttcaattggttttaacggctgtagatggtgggaacccacataggtcaggtaccact
cagattgatattactgttacagacataaatgataacgcacctgccttcgatcaagacata
tataagaccagggtgttagaaaactcacccgtgggcaccttgctgataaaactgcatgca
agcgatttggatgaaggcctgaacgctgagtttaaatattcttttagtaactatgcatcc
ccaaacgtacgtgagttgttcattttggacgctgaaacgggagaaatcaaaattaatggc
ttactagattttgaaacaacatttgattacgagcttgatgtacaagctgtggacaacctg
ccaaatgtgggacatgctaaggttttggttactgttgttgatgcgaatgataatgctccc
gacataaaactgacttcagtaaataatctgatttcagagaatgcgacagtgggtagtgta
attgctgtatttgaagtaacagatagagactctggggaaaacgggctcgttcactgtcag
atttcagaaaatattccatttaagattgatacgattttgccgaatcgctataaaattatg
accggaaagaaacttgatcgtgaagcaatctcacagtataacatatcaattacagcatgg
gatgctggatcgccctctcttactacaattgaaaccatcagcgtttcagtttccgatata
aatgacaatgctccacattttgtgcagtcctcatacgatgtctatctgatggagaacaat
gttccaggccgatctattttctcagttaccgcgttggatcctgatttggaaaacaatgga
gacgtctcctactctattctggaaaacaagccacaaccattgtctgagccttcttccttt
gcggtaagttcgaaaagcgggagcatattcgctctgcgttcctttgactatgaacaagta
aagaattttcaaatcacaattttagcccgtgatgctggatccccgccactgagcaacacc
gctattgttaagattataatcttggatcaaaacgacaatcctccaataataatttctcca
cccgcgtggaacagttcagcagcattctcaatagtgccgcattcaatatttccaaactcc
ttggtgacgaaggtaatcgcaaatgataaggattccggacaaaatgcacggctttccttt
gagataattgaagctaccgatcttagtcttttcatcgtgggccgtcacactggagaaatc
agaacaatccgatcttttatagctgacgacagcactatacaaaacttggtagtcctggtg
aaagacagtggtcaaccaagtctctccagctcagttacaatatgcttatcgatcacagcg
aacagcagtggaagcccttcaaagcctgcaaaaaatcagaaaaatgtaacatatttttca
gatcttaatatatatttaatatttttatttggatcaacaagcctcatttttcttcttata
attattttattggttgtcttcaaatgcaaacaagatcgaagtaattctatttatcagaat
tctgcagcgtgttgttgctgtatgcagagggattccaacgttgtctttagtagaagatct
gttagaaatgaatcacaaaattattataaagctggccgtatgctggctaattctgatcct
tgtcattatacggttcgtttatcaccggcctcatccaagagtgattttctatttctgtcg
acttgtcagcctacactaccattgaatgacgttagtgctgatgatctagttgttaaatag
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