Hemitrygon akajei (red stingray): 140739257
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Entry
140739257 CDS
T11019
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16499
protocadherin delta 2
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
haka04515
]
140739257
Cell adhesion molecules [BR:
haka04515
]
Cadherins
Protocadherins
140739257
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
140739257
NCBI-ProteinID:
XP_072923501
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Position
15:complement(39413589..39416732)
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AA seq
794 aa
AA seq
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MANAFRLSLSAIASFVIVCAPGRISGQIRYSIAEEMEKGTFVGNIAHDLGLNVRQFSARK
FRLSSDDGGRYMKVSLENAVLSIHERIDRERLCGQSDMCSIPFEIILENPLEVHRGELVI
SDVNDNSPTFRDSSIPLQISEVIPPGVRFRLESAEDPDIGINTVADYAVSSSEYFRLETR
RTEEGIIIAELVLEKSLDRELQSSFQLVLTATDGGIPQRTGTAQILITVLDFNDNPPVFE
HDVYRNSIKENAPQGTVVTIVNATDLDEGLNAKLLYSFSGISSQRVHGVFSLVPETGEIL
VEGPLDFEETNSYSLDIQAVDHGSPAITGHSKVLIKVIDVNDNAPEIKVKTLTNHIPENA
PPGTLITLIDVIDRDSGENGQVRCEIQQNVPFLLQTSSNHYKLITSEMLDRETMSEYRLF
VSAWDLGSPPLSTNKTIHIAVTDVNDNAPRFADLSYNVYLTENNAPRSSIFTLTASDPDL
EQNSYVSYSILENHIQNPPVSTYFSINSMNGTIYTMRSFDYEELKSFQIYVQARDAGVPP
LSSTATVNVIILDQNDNVPVIVSPSGQGGSSPMTLLPQSAGQGYLVSKILATDADSGQNA
RLVYQMVKTTDPSLFILGKTTGEIRTARNILESDLITQTLDILVKDNGQPNLSSTVKIHI
TILQNSTDTVTESNISVGRPEYSSDLNLYLLVIFSCTSIVFLLIIILLIGIKCKQDRNIT
QEFTSTSYCYKPGNMHDTINRRSVMEETLRYPGTDQVVRVPGLPQYSVCLSPESAKSDFL
FLKPCGPPTSQAQE
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgcattcaggttaagcctctctgcaattgcatcctttgttatcgtgtgtgcc
cccggtcgaatttccgggcaaattagatactcgattgccgaggaaatggaaaaagggaca
tttgttgggaatatcgctcacgatttgggactgaatgtacgacagttctccgctcgcaaa
tttcgactcagctctgatgacggaggccggtacatgaaggttagtttagaaaatgcggtt
ttgtctattcatgaaagaattgaccgggaacgtctttgtgggcaatcggatatgtgcagt
ataccctttgaaataatactcgaaaatcccttggaggtgcatcgcggggagctagtgatt
tctgatgtgaatgacaactcgcctacattccgggatagcagtattccgttgcagatatct
gaagtcattcctcctggagtgcgcttccgtctcgagagcgcggaagaccccgacattgga
ataaatacagtggccgactacgcagtcagttcgagtgagtactttaggcttgagacacgg
agaaccgaggagggtattataattgccgagctggtgttagagaaatccttggaccgagag
ttgcagtcatcctttcagttagtgcttacggctacggacggagggatccctcaaagaacc
ggaacagctcagattctcattactgtactagactttaatgataatccacctgtattcgag
catgatgtttacaggaacagcataaaggaaaatgcaccacaaggtactgtagtgacgata
gttaacgcaacggatttggacgaagggctcaatgctaaattgttatattcttttagtgga
atatcctcacaaagagtgcatggggtgttcagtttggttccggaaactggggagattcta
gttgaagggcctttagattttgaagaaacaaacagctattcactcgatattcaagctgtt
gatcacgggagtcctgcgattaccggacattccaaagtactgattaaagttattgacgtc
aacgacaacgcaccagagataaaagtgaagacattgacaaaccatatcccagaaaatgct
ccaccaggaactttaatcacattgattgatgttattgatcgtgattctggagagaacggt
caagtgcgctgcgaaatacaacagaacgtcccgtttctgttgcaaacatcatccaatcat
tataaattaattacaagtgaaatgttggaccgtgaaacgatgtctgagtatagactattt
gtatcagcctgggatttggggtcacctccactgtcaacgaataaaaccatccatattgca
gttactgatgtaaatgataacgccccacgtttcgccgatctgtcctacaacgtatacctg
actgaaaataatgcacctcgctcatcgatcttcacattaactgcgtctgatcctgacctg
gaacagaattcctatgtttcttactctattctggagaatcatatccaaaacccgccagtg
tccacgtacttcagcattaactctatgaacggtactatttacacaatgcgctcctttgat
tatgaggaactcaaaagctttcagatctatgttcaagcccgtgacgctggagtgcccccg
ctgagcagtaccgcaacagttaacgtgatcatcctggatcaaaatgacaacgttccagta
attgtttcaccttctggacagggtggctcatcgcccatgacgctcttgccccaatcagcg
ggccaagggtacctagtgtctaagatattggctacagatgcagattctggtcagaacgcg
cgactcgtttaccaaatggtgaaaactacagatcccagtttgtttatccttggcaagact
actggcgaaatcagaactgcgcggaatatcttggagtcggatcttatcactcaaactttg
gacattctggtaaaagacaacgggcagccaaatctatccagcacggttaagattcacatt
acaattttgcagaacagcaccgatactgtcaccgaaagtaatatttcagtaggaagaccc
gagtattcctccgacctaaacctatatttattggttattttcagttgcacttccattgtc
tttcttctcataatcattctgctgattggcatcaaatgtaaacaggacagaaatatcacc
caagagtttacttccaccagttattgttacaaacctggaaatatgcatgacacgattaat
cgaagatctgtcatggaggaaactttacgctatcctggtactgatcaagtagtccgtgtg
ccaggactgccacagtactcagtctgtttgtctccagaatcagcaaagagcgatttcctg
ttcttgaagccatgcggccctcccacctctcaggctcaagaataa
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