Hemitrygon akajei (red stingray): 140739519
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Entry
140739519 CDS
T11019
Symbol
ebf1a
Name
(RefSeq) transcription factor COE1-A isoform X1
KO
K09103
early B-cell factor
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haka03000
]
140739519 (ebf1a)
Transcription factors [BR:
haka03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
140739519 (ebf1a)
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
140739519
NCBI-ProteinID:
XP_072923991
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Position
15:complement(85539609..86024314)
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AA seq
591 aa
AA seq
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MFGIQENIQRSGGSMKEEPIGSGMNAVRSWMQGAGIMDANTAAQSGVGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTAFVGFVEKEKELSGEKTNNGIHYRLQLLYSNGI
RTEQDLYVRLIDSMTKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKH
GRRARRLDPSEGTPSYLEHATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTMLV
WSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRLQ
KVIPRHPGDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQ
LPALSNTSVHAGMMGVNSFSGQLAVNVSESSQAANQGFTRNTSSVSPHGYVPSSTPQQTN
YNSVTTSMNGYGNAGMSNLGSSPGFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSTSGI
FSFSPANMVSAVKQKSAFAPVVRPQTSPPPTCTSANANSLQAISGMIVPPM
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggattcaggaaaatatacaacgaagcgggggcagcatgaaggaagaaccgatc
ggaagcggaatgaatgctgtccgctcctggatgcagggagccgggataatggatgcaaac
acggccgctcagagtggagtcggtctagcccgggcacatttcgagaaacaaccgccttct
aatctgcgcaaatccaacttctttcactttgtactggccctatatgaccgccaaggtcag
ccagtggaaatagagcggacagctttcgtgggcttcgtggagaaagaaaaagaattaagt
ggagaaaagaccaataatggaattcattacagattacagctgctctacagtaatggtatc
aggaccgaacaagatttgtacgtgcgactcatagactcgatgacaaaacaggctatcatt
tatgaaggacaagacaaaaatcctgaaatgtgccgagtccttctgacacatgagatcatg
tgtagtcgctgctgtgacaagaaaagttgtggcaacaggaatgagacgccgtcagaccca
gtgataattgacaggttcttcttgaaattctttctgaaatgcaatcagaactgcctgaag
aatgcaggaaaccccagggacatgcgaaggttccaggtggtcgtttccacaacggtgaat
gtggatggccacgttctggctgtttctgacaacatgttcgtccacaacaactccaaacat
ggtcggagggctcgaaggctcgatccctctgaaggtacgccctcttatctggaacatgcc
acaccttgcatcaaagccatcagtcccagtgaaggttggaccactggaggggctaccgtt
atcattatcggagataatttctttgatggattacaagtcatatttggcaccatgctggtc
tggagtgagctaatcaccccgcatgcaattagagtgcagacccctccccgtcacatccct
ggtgtggtggaagtcacattgtcttacaagtcgaaacagttctgtaaaggaaccccgggc
cggttcatctacacagcactgaatgaacccaccattgactacggcttccagcggttgcag
aaagttattcccagacatccgggtgatccagaacgattgccaaaggaagttatactgaag
agggcggcagacttggtggaggcactttatggcatgccacataataatcaggaaatcatc
ctgaagcgagcagctgacattgcagaggccctgtacagtgttccccggaaccacaaccaa
cttccagctctcagcaacacatctgtccacgcagggatgatgggtgtcaattccttcagt
gggcagttggctgtcaatgtgtctgaatcttcgcaagcagccaatcagggttttactcgc
aacacaagcagcgtgtctcctcatggatatgtgccgagttccactccacagcagacaaac
tacaattctgtgacaacgagtatgaatggatatggcaatgcagggatgtccaacctagga
agttctcctggttttctcaatgggtctgctgccaattcgccatatgccatagtaccgtcc
agtcctactatggcctcctccaccagccttccttcaaattgtagcagtacctctggcata
ttctccttctcgccagccaatatggtgtctgccgtgaaacaaaaaagcgccttcgctccg
gtggtgaggccacagacctcccctcccccgacctgcaccagcgccaacgctaacagtctc
caagctatttccggtatgatagtccctccaatgtag
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