Hemitrygon akajei (red stingray): 140739554
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Entry
140739554 CDS
T11019
Name
(RefSeq) uncharacterized protein
KO
K16499
protocadherin delta 2
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
haka04515
]
140739554
Cell adhesion molecules [BR:
haka04515
]
Cadherins
Protocadherins
140739554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
RT_RNaseH_2
RVT_1
RT_RNaseH
TMEM154
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
140739554
NCBI-ProteinID:
XP_072924050
LinkDB
All DBs
Position
15:complement(39136022..39179815)
Genome browser
AA seq
1873 aa
AA seq
DB search
MAIVLRQILSLFHIMCVLDLVCGQIRYSIPEELEHGSFIGNIAEELGLSIRELITRNFKL
VADDAFHLLKVNINNGILVVNERIDRDDICKQLSHCFVSYDAVLENPLELHGIQVEILDI
NDNAPRFTEKEYYSEVSEFTATGALFALERAQDADVGTNTVMSYQISSNEHFRLKEQEAA
DGSKTAVLILEKPLDREQQSEFQLILTAIDGGIPPRSGTAKIIISVQDVNDNAPIFSHQI
YRANVVENAPGGTIVTTINAADLDEGKNGEVKYSFSPHVPQSIQALFNLDSETGQIYVSG
SLDYETENVYYIEVQAVDKGLPALSGRATIIVELIDVNDNAPEIKVTSVANNVREDDDIG
TVVAIINVIDRDARENGQVRCRLPLNIPFKLQKSLNNQFKLVINDALDRESTSSYNISIT
AWDAGQPSLSANKTLFISVSDVNDNVPRFSQSSYQVFLMENNTPGGSILTVIAFDTDFGK
NGEVFYSLVERPLGDVSLSGAVSINSESGSIYALRSMDYEKLKNFQFNVQASDCGSPAMS
STATVNVVILDQNDNAPVIVSPSKWNNSAATQIVHQSAYPGLVVSRIIATDADSGQNARL
SYQLLEATDRTLFTVGFLSGEIRLSRKFKNEDSHKHRLLILVKDNGQPSLSSTATALFSL
LHNATESFSELTNKPKDNVDFSDLNLILIVTLGSTSCIFLVVIVLLVILKCSQDRNIYGY
SARMCCCSCEHSSGDFNRRAVPKELLNYVGVGQTLPIRESHNYTVALSPDSSRSDFLFLK
PHHPTLPLDKLSACGSVGKGEIGARRFDTMVGSDLVLVQTSADITAVGLPASIGALGEEE
KGAQSGYYLIPMSEADKEKAAFICPLGFFQFESMPPGISGAAATFQRVMEKTVGNMNLLE
VLVYLDDLIVFGSTLEEHEDQNTGLRPMAFVSTVFVALQEKLSTHKLEFLVLKWAVLDKL
SNYLSVAKFETKDVAKPSGILAAKQIIQPFILAPFFVLPKPFFLFIVELGSTDIGVGAVL
AQWFASDSKLRQCSFFSGRHSPIEGIHDIGNGSYSQLNRVQQIDCCKFKTISLIQSRKIM
PTELSHGLSFAHLLCALHLVCGQIRYSIPEEQELGAFVGNIAEDLSLSITEITDRKLRLL
SDEKLQLLKVNMHNGILVVKERIDRDTFCKQMSTCSISYDAALENPLELHRVDVEIVDIN
DNAPGFRENKYNIHISEFTATGALFPLDRAQDADVGANAVISYRINSNEHFGLKEKEVDD
GSKITELILQKPLDREQQSEFHLILTAIDGGIPPRTGTAEIIISIVDANDNAPVFERHTY
RVSITENAPTGTIVTKIKAVDLDEGANGDVNYSFGTHVSQSVRELFTLDPESGQIYVSGL
LDYEAENVYEIEVQAVDKGLPALSGSAKIIVHLTDVNDNAPEIRVTSVSSNVREDDALGT
VVAIISVTDRDSGENGQVRCRIPTNVPFKLQKSLNNQFKLIVNNAMDRESIPLYNIPITA
WDAGLPSLSANKTLSISVSDINDNVPKFAQSSYQVFVMENNPPGGSIFTVTALDPDFDKN
GKISYSLVGSPIGDAFLSDAISVNSESGCIYALRSFDYEKLKNFQFKVQASDSGSPAMTS
TATVNVVILDQNDNAPVIVSPSKMNNSAVTRIVPHSPYPGMIVSKITATDADSGQNARLY
YQLLEATDRTLFAVGLLSGEIRTSRRFQNEDRHKQSLVILVKDNGQPSLSSTATVVFSFL
RNATENFLEITNKPKDQLLFSDLNLILIIVLGSTSSIFLLIIIVLVIMKCNQDKNIYGYS
CRICCHNWVNSNDEYNRRAVPKAVLNYASAVQTLPIRESYNYRVTLPPDSSNSDFLFLKP
HHPTLPLDEFQRS
NT seq
5622 nt
NT seq
+upstream
nt +downstream
nt
atggcgatagtactcagacaaatattgtctttatttcacattatgtgcgtattggacctt
gtttgcggacaaattcgatactcgattcctgaggaattggagcacggttcctttattggc
aacatcgctgaggagttaggcctaagcattcgagaactcatcactcgaaatttcaagctg
gtcgccgatgatgcgtttcatttattgaaggtaaacattaataatggcattttagttgtg
aacgagcgaatcgacagggatgatatctgcaagcaactgtcgcattgttttgtttcttat
gatgcagttttagaaaatcctttagagttgcatggaattcaagtggaaatattggatata
aacgataatgcgcccagatttacggagaaggaatactattcagaagtctctgaatttact
gcaacgggtgcgctctttgctctagagagagcgcaggacgcggatgtgggaacaaataca
gtaatgtcatatcaaatcagctcaaatgaacacttccgtttgaaagaacaagaagcagcc
gatggaagtaaaactgcagtgctgatactagaaaaaccgctggaccgcgaacagcagtct
gaattccaactaatactgacggccattgacggtgggattcctccaagatctggcacagcg
aaaattattatttctgtacaagatgtcaatgataacgcccccatctttagtcatcaaata
tatagggctaatgttgtagaaaatgcacctggaggtactatagtgaccacgataaacgct
gctgatttagatgaaggaaaaaatggtgaggttaaatactctttcagtccacacgttccg
cagagtattcaagcgttgttcaatttagactcagaaacgggacagatttatgtgagtgga
tctctagactatgaaacagaaaacgtttattatattgaggtacaagctgtggacaaaggt
ttaccagcattaagtgggcgcgccactatcatcgttgaattaattgacgttaatgataac
gctcctgaaataaaggtaacatctgtagctaacaatgtgcgtgaagatgacgacatcggg
actgtagtcgctataataaatgtcatagatcgtgatgctcgtgagaatgggcaagttcgt
tgtcgacttccattgaatatcccctttaaacttcagaagtctttgaacaaccagttcaag
ttagtaattaacgatgcattagatcgggaaagcacttcgtcgtataatatctctattaca
gcttgggatgcagggcagccctctctttcagcaaacaagaccttgttcatttcagtctcc
gatgttaatgataacgtaccaaggtttagtcagtcatcatatcaggtgtttctcatggaa
aacaacacaccaggtggatctatacttactgttatagcttttgacaccgattttggcaag
aatggcgaagtattttattccctcgtggagaggcccttgggagatgtttctttgtctggc
gcggtatccattaactcagaaagtgggagcatttacgcactgcgctccatggactatgaa
aaactgaagaatttccaattcaatgttcaagcatctgattgtggatcacctgcaatgagc
agcaccgccacagtaaatgtggtgattttagatcaaaatgacaatgctccagtgatagta
tcgccatctaaatggaacaattccgcagcgactcagattgtacaccagtcagcatatcca
ggactggttgtttcccggataattgcaactgatgcagattcaggacagaacgcccgcctt
tcgtaccaacttttggaagctacggatcgtactttgtttactgtgggatttctttctgga
gaaattagactgtcccgaaagtttaagaatgaagatagtcataagcataggcttttaatc
ttggtaaaagacaatggacaaccgagtctctccagtaccgctacagctctgttttcactc
ctgcacaatgctaccgaaagcttctctgaattaacaaataagccaaaagataacgttgat
ttttcagacttaaatttgatcttgattgttacgttgggatcaacatcttgtatatttcta
gtagtgattgttttgctggtcattctaaaatgcagccaagatagaaatatttatggttat
agtgctagaatgtgctgttgcagttgtgagcattcatctggcgactttaatcgcagagct
gtgcctaaagaacttctgaattatgtaggtgttggacagactttgccaattcgggaatcg
cataattacactgttgcactctcacctgattcatctaggagcgatttcttgtttttaaaa
ccgcatcatcccacgttgcctctggataagttgagcgcttgtggttctgttggcaaaggt
gaaatcggggcgcgaaggtttgatacaatggtgggctcagaccttgttttagttcagacc
agcgctgacataacggcggtgggactgccagcgtctatcggtgccctaggtgaggaggaa
aaaggagcccagagtggatattatctgatcccgatgagtgaggccgacaaagagaaggcg
gcatttatatgtcctctgggattcttccagttcgaaagtatgccccctggtatatcggga
gcggctgcaaccttccagcgggtcatggagaagacggtggggaatatgaacttgcttgag
gtgttggtatatttggatgatctcatagtatttggttccaccttggaagaacatgaggat
cagaacaccgggttgaggccgatggcgtttgtcagcacggtgtttgtcgccctccaagag
aaactatccacgcacaagttggaattcctggtgttgaaatgggcggtgttggataagctg
agtaactatctctccgttgccaagtttgagaccaaggacgtggccaagccgtctggaatt
cttgcagcgaagcagatcatacaaccgttcatattagctccattctttgttttacctaaa
ccgttctttctcttcatcgtggagctgggctctacagacataggagtgggtgcagtgctg
gctcaatggtttgcttcggacagtaaactacgccaatgttctttcttctccgggcggcat
tctccgatcgagggaattcatgacatcgggaatgggagctactcgcagttaaatcgagtt
cagcaaatcgattgctgcaaattcaagacaatatcattaatccaatcgaggaaaatcatg
ccgacagagctcagccacggattgtctttcgcgcaccttttgtgtgccttgcatcttgtt
tgtggacaaattcggtactcgattcccgaagaacaagagctcggagcattcgtagggaac
attgctgaggatttaagcctaagcattacagaaataactgaccgaaaactcagactgctc
tccgatgaaaagcttcagctattgaaggtaaacatgcacaatgggattttagttgtaaag
gagcgaatcgacagggatacattctgcaagcaaatgtcgacttgctctatttcctatgat
gcagctttagaaaatcctttggaactgcatcgcgttgacgtggagatagtagatataaat
gataatgcgccaggatttagggaaaacaagtacaatatacatatctctgaattcaccgca
acaggggcactctttcctctcgatagagcgcaggatgccgacgtgggagcgaatgcagtt
atttcatacagaatcaactcaaatgaacactttggtctgaaagaaaaggaagtagatgat
ggaagtaaaattacagaactgatattgcaaaaacctctcgaccgcgaacagcaatcagaa
ttccatttaatactgacggccattgacggtgggattcctccgagaactggaacagcagaa
atcattatatctatcgtggatgccaatgataatgctcccgtattcgaacgccatacatat
cgggttagtatcacagagaacgcacccacaggtacaatcgtgaccaaaataaaggctgtt
gatttagatgaaggagcaaacggcgatgtaaattattctttcggtactcatgtttcccaa
agtgttcgagagttgtttactttggacccagaatcggggcagatttatgtgagtggacta
ctggattatgaagctgaaaatgtttatgaaattgaggtacaggctgtggacaagggtcta
cctgcattaagtggaagcgccaaaattatcgttcatttaactgatgttaatgataacgct
ccggaaatacgggtgacatcagtatccagcaatgtgcgggaagatgatgccctcgggact
gtcgtcgctataatcagtgttacagatcgcgattctggcgagaatggacaagtacgttgc
cggattcccaccaatgtcccctttaaactacaaaagtctttgaacaaccagttcaagttg
atagttaacaatgctatggaccgcgaaagcattccgctgtataatatccctattacagcc
tgggatgcagggctaccctctctttctgcaaacaaaaccttatccatttcagtctcagat
attaacgataacgtaccgaagtttgcacaatcttcgtaccaggtgtttgtcatggaaaac
aacccaccgggtggatctatatttactgttacagctttggacccagattttgacaagaat
ggcaagatatcatattctcttgtggggagtcccattggtgatgcttttctatcagacgct
atatccgttaactcagaaagtggttgcatttacgctctgcgctcttttgactacgaaaag
ctgaagaatttccaattcaaagttcaagcgtctgactctggatctcctgcaatgaccagc
accgcaacagtgaatgtagtgattttagaccaaaatgacaatgctccagtgatagtttca
ccttccaaaatgaacaactcagcggtgactcggattgtgccacactccccatatccagga
atgattgtttccaagatcacagcaactgatgcagattccgggcagaatgcacgtctttac
taccaacttttggaagctacagatcgtacgttgttcgctgttggacttctctctggagaa
atcagaacgtcccgaaggtttcagaatgaagaccgtcataagcagagtcttgtaatcttg
gtgaaagacaatggacaaccgagtctttccagtacagctacagttgtgttttcattcttg
cgcaacgctactgaaaactttttggaaataacaaataagccaaaagatcagctgcttttt
tccgacttaaatttgattttgataatagtgttagggtcaacttcctccatatttcttctg
ataataattgtgctggtaattatgaagtgtaatcaggataaaaatatttacggttacagt
tgtagaatctgctgtcacaattgggtgaattctaatgatgaatataatcgcagagccgtg
ccgaaagcagttctgaattacgccagtgctgtacagacgttgcccattcgggaatcgtat
aactaccgcgttacactgccacctgattcatctaatagcgatttcttgttcttaaaaccg
catcatcctacgttgcctcttgatgaatttcaacgttcttga
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