Hemitrygon akajei (red stingray): 140739581
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Entry
140739581 CDS
T11019
Name
(RefSeq) protocadherin gamma-A6-like
KO
K16499
protocadherin delta 2
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
haka04515
]
140739581
Cell adhesion molecules [BR:
haka04515
]
Cadherins
Protocadherins
140739581
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
140739581
NCBI-ProteinID:
XP_072924079
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Position
15:complement(39297420..39300574)
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AA seq
788 aa
AA seq
DB search
MANSALNNIMFSGVIFAILGCITSPILGQIRYSIPEETERGTFVGNIAEDLRLNVPQLSD
RKLRLTSDDGGQHMKVNLDNGILSVRERIDRELLCGQAPMCRIHFEIILENPMVVYRGEV
EILDINDNAPIFREGPIVLQIAENIARGVRFPLETAEDSDTGINTVAGYKLSSNDYFNLK
TQRTEYGVVNAELLLEKPLDREMQSAFQLVLTATDGGIPQRSGTTVILINVVDVNDNPPV
FDRELYKVSLMENSPKGTLALKIKATDMDEGPNAQVTYSFSKMTAPKLLELFSLNPSTGE
IQVEEELDYEEASSYSLNVQATDHGVPPITGHSKIFITVIDVNDNAPEIKVTSFTSKVPE
NAPLGTLIILINVIDRDSGENGQFHCDIPKNVPFRLRTSSKNHYELITSGPLDCEIVAEY
KIPFVARDLGSPSLTTNKTIRILISDVNDNAPRFDTSSYNIYVMENNTPGSSIFEVMAKD
YDMDENSHVSYCFLEDLNQASPFSSYLSINSMNGTIYALHSFDYEELKHFQLHVQARDAG
VPPLSSTATVNVIILDQNDNAPVIVSPLAQSGSAAVETLPHSAAQGYLVTQIVATDADSG
QNARLSYQLIKATDSTLFNIGPYSGEIRTARNILQSDATTQTLSCLVKDNGQPSLSSTVT
MHITVLENITEKVTDSGNLSRNNKYFTDFNMYLIIIFGFTSGLFLVIILLLIGLKCKQDR
RVSQTYYSSGCGDTCNRRAAMEETLRYSGTDRIFHEPDAHHYSVCLSPESAKSDFLFLKP
CQVHTPRS
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggcgaattcggcgctgaacaacattatgttcagcggtgttattttcgcgattctggga
tgtataaccagtcctattttaggacaaattcgctattctattcccgaggaaacggagaga
gggacctttgttggaaatatcgcagaagatttgagattaaatgtaccgcaactgtccgat
cgtaaattgcgattaacctcggatgatggcggacaacacatgaaggtaaatttagataat
gggattttgtctgttcgtgaaagaatcgatcgggagcttctttgtggacaagcaccaatg
tgtagaattcattttgaaataatactggaaaatcccatggtcgtgtatcgcggggaagta
gagattctcgacataaatgataatgctcccattttccgagagggccccattgtcttacag
atagctgaaaatatcgcacgcggggtacgctttcctctcgagactgccgaagattcggac
actggaataaatacagttgctggttacaagctcagctccaacgactactttaatctaaaa
acgcagagaactgagtatggtgttgtaaatgccgagttgctgttagaaaaacctttggat
cgagagatgcagtcagcctttcagcttgttctgacggcaactgatggcggaatcccacag
agatctggcacaactgtgattctcatcaacgtagtggatgtcaacgataatccaccagta
tttgatcgcgaattatacaaggtcagcttaatggagaactcacccaaaggtacattggct
ctgaaaatcaaggcaactgatatggacgaagggccaaatgctcaggtaacatattcattc
agcaagatgacagcaccaaagcttcttgaattgttcagtttaaaccccagtactggtgag
attcaggttgaagaggaactagactacgaagaagcgtccagttattccttgaatgttcaa
gctacagaccacggagtacctccaataacgggacactccaaaattttcatcacggtaatt
gatgtaaatgacaacgcacccgagataaaagtgacatcgtttactagcaaagttccagaa
aatgctccactgggaacgttgataattttgatcaatgttattgatcgcgattctggagaa
aatggtcagtttcactgtgacatcccaaagaatgtcccttttagacttcgaacatcatcg
aaaaaccattatgagttgattaccagtggaccgttagactgtgaaattgtcgctgagtat
aaaataccctttgtagctcgggatttaggatcgccttccctgacaacaaataaaactata
cggattttaatttcagacgtgaatgataacgccccacggtttgatacatcgtcctacaat
atctatgtgatggagaataatactccaggtagttccattttcgaggtaatggcaaaggat
tatgacatggatgagaattcccatgtatcgtactgctttctggaggaccttaaccaggca
tctccattttccagttacctcagcataaactcgatgaatggcactatttacgcgttgcac
tcttttgactatgaagaacttaaacatttccagctgcatgttcaagcccgtgacgctgga
gtgcccccgctgagcagcaccgctacagtgaatgtgatcatcctggatcaaaatgacaac
gcaccagtgattgtttcgcccttagcacagagtggatcagcagccgtagagactctgccc
cattcagcggcccagggctacttggtgactcagatagtggcaactgatgcggattctggt
cagaacgcacgcctctcctatcagttaataaaagctaccgattccacattgtttaacatt
ggaccatattctggcgaaatcagaacagcgcgcaatattttgcagtccgatgctaccaca
caaactctctcctgcttggtaaaggacaatggacagccaagcctctccagtacggttaca
atgcacattactgttttggagaatatcactgaaaaagtgactgattctggtaatttatcg
agaaacaacaaatatttcaccgatttcaacatgtatttaataatcatttttggtttcact
tctggtctctttcttgtgattatccttctgctaattggcctgaaatgcaagcaagacagg
cgtgtctcccaaacatattattcttccggttgtggagatacatgcaatcggagagctgca
atggaggaaactttacgttattccgggactgatcgtatatttcatgaaccagatgcgcac
cattactcagtctgcttgtctccagagtcagcgaagagcgattttctctttttgaagcca
tgccaagtgcacacccctcggtcctga
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