Hemitrygon akajei (red stingray): 140739583
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Entry
140739583 CDS
T11019
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16499
protocadherin delta 2
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
haka04515
]
140739583
Cell adhesion molecules [BR:
haka04515
]
Cadherins
Protocadherins
140739583
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
TMEM154
TMEM132_C
Motif
Other DBs
NCBI-GeneID:
140739583
NCBI-ProteinID:
XP_072924081
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Position
15:complement(39696616..39699375)
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AA seq
794 aa
AA seq
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MACVWRLNLTLIASIFIVCTLEKISKQISYPIPEEMEEGSFVGNIAEDLGLNAQQLAARK
CRLSSDDGGRYIKVNVDNGVLSIRERIDRERLCGQTDRCTMPFEIILGNPLEVIHGELVI
LDANDNSPTFRESSIPLRISEAIPPGVSFRLERAVDTDNGINTVVDYAISSSEYFSLKSR
RTEGGIVIAELMLEKSLDRELQSSFQLVLTAMDGGTPQRSGTAHIFITVVDINDNPPVFE
HDVYRCSIKENTPRGTLIMKVKANDLDEGLNAELTYSFSGHTSEIMHGVFSLIPETGEIV
IEGPLDFEETNSYSLDIQAVDHGSPAITGHSSVQIKVIDVNDNAPEIKVTSLTNHIPENA
PPGTCITLINVIDRDSGENGQVRCEIQENLPFMLQASSNHYEIVTQKRLDRETVSEYTIP
VLAWDMGSPSQSTNTIIHIAVTDVNDNAPRFSELSYNVYVAENNAPGAPIFTVSASDPDL
GQNSSVSYSILDDHFQNLPVSTYLSINSANGTIYALRSFDYEEFKTFQILVQARDAGVPS
LSSSATVNVIILDQNDNAPVIISPSAQSGSAAAEIVPHSAGQGHFVTKIMATDADSGQNA
RLVYQMVKATDPNLFMIGQTSGEIRTTRKILEEDLTTQTLLILVKDNGLPKLSSTVTVHI
AIMKNSTETHPESSNSVNTSEYLSDLNLYLLVIFSCTSIVFLLIIIVLIGIKCKQERNNP
QECISPSYCYKRGGMQDTCNRRSVMEETLRYPGTDQLVRMPGLPQYSVCLSPESAKSDFL
FLKPCGPPSSQTQS
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgtgtatggaggttaaacctcacattaattgcttcaatttttatcgtgtgtacc
ctggagaaaatatctaaacaaattagttaccctattcccgaggaaatggaagaagggtcg
tttgtagggaatatcgctgaagatttgggattgaatgcacagcaattagcagctcgtaaa
tgccgactgagctctgatgatggaggacggtatattaaggtcaatgtggataatggagtt
ttgtccattcgcgaaagaatcgaccgggaacgtctttgtgggcaaacagataggtgtacg
atgccctttgaaataatactgggaaatccattggaggtgattcacggggagctggtgatt
cttgatgcgaatgacaattcacccactttccgggagagtagtattccgttgcggatatca
gaagctattcctcctggtgtgagcttccgtctcgagagggcggtagacaccgataatgga
ataaatactgtcgtcgactatgcaatcagttcgagtgagtactttagtctaaaatcacgg
agaaccgaggggggtattgtaattgctgaattgatgttagagaaatctttagaccgggag
ctgcagtcatcttttcagcttgtgcttacggctatggacggtgggacccctcagagatcc
ggaacagctcacattttcattactgtagtggatatcaatgataatccacctgtattcgag
cacgatgtttaccggtgtagcataaaggaaaatacgccccgaggtacattaataatgaaa
gttaaagcaaatgatttggatgaggggctgaatgcagagctgacatattccttcagtgga
catacttcagaaataatgcatggagtgttcagtttgatcccagaaactggagagattgta
attgaagggccactagattttgaagaaacaaacagctattcacttgatatccaagctgtt
gatcacgggtctcctgcgattacaggacactccagtgtgcagattaaagttattgacgtg
aatgacaacgcacccgaaataaaagtgacgtcactgactaaccacattccggaaaatgct
ccgcccggaacttgcataacactgattaatgttatcgatcgtgattctggagaaaacggt
caagtgcgctgcgagatacaagagaacctaccttttatgctgcaagcatcctcaaatcat
tatgagatagttacacagaaaagactggatcgtgaaacggtgtctgagtatacaatacct
gttttagcttgggatatgggttcaccttcacagtcaacaaacacaatcatccatattgca
gttactgatgtaaacgataacgccccacgtttttctgaactatcctacaacgtgtatgtg
gctgaaaataatgctcctggcgcacccattttcacagtatctgcgtccgatcctgatctc
gggcagaattcatctgtttcgtactccattctggacgatcacttccaaaatctgccagtg
tccacatacctcagcattaactccgcaaacggcaccatttacgccttgcgctcttttgac
tatgaggaattcaaaacatttcagatcctcgttcaagcccgtgacgccggagttccctca
ctgagcagcagcgctacagtgaatgtgatcattctggatcaaaatgacaacgctccggta
atcatttcaccttcagcgcagagtggttcagcagccgcggagatcgttcctcactcagcg
ggacaggggcatttcgtcaccaaaattatggctacagatgcagattccggtcagaacgca
cggcttgtttaccaaatggtgaaagctactgatccaaatttgtttatgattggtcaaacg
tccggggaaatcagaacaacgcgcaaaatattggaggaggatcttaccacacaaactttg
ctcatcttggtgaaagacaatgggctgccaaagttatccagtacggttacggttcacatc
gcaattatgaagaacagcaccgaaactcaccccgaaagcagtaattcagtgaacacttcc
gaatatttatctgatctcaatctttatttattggttattttcagctgtacttccattgtc
tttcttctgattatcattgtgttgatcgggatcaagtgtaaacaggagagaaataacccc
caggagtgtatttcgcccagctattgttacaaacgtggaggtatgcaggacacgtgcaat
cgaagatcggtaatggaagaaactttacgctatcccggtactgatcagttagtccgtatg
ccaggactgcctcagtactcagtctgtctgtctccagaatcagcgaaaagcgatttcctt
ttcttgaagccatgcggccctcccagctctcagactcaatcctaa
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