Hemitrygon akajei (red stingray): 140739775
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Entry
140739775 CDS
T11019
Symbol
polrmt
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
haka03029
]
140739775 (polrmt)
Enzymes [BR:
haka01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
140739775 (polrmt)
Mitochondrial biogenesis [BR:
haka03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
140739775 (polrmt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_3
PPR_2
ATPase
Motif
Other DBs
NCBI-GeneID:
140739775
NCBI-ProteinID:
XP_072924385
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Position
16:15204988..15283313
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AA seq
1288 aa
AA seq
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MSVLKLCASRNAGVLPLRKLLLLSSGCHRCLQLRSRPTRSSEHPWEFFRRNYSSVIFKKD
DGKTQTSEKAHLLEVLEARIQQLQADNVTEMQCTDVQFVNRINITTQENHTGSANLSFLP
AREFDGSLNSNTAALREERTVENQLDKKSCAETVHPKSTFAPKKWMEKLIKEKNNKTKRQ
LSVVKKPKECKNKNVYNAKKVEQGRKSSSKGNSKPRKPKSSALSTLQAESQFSQDAVLAE
VEHLEKQFSNWDRTAKLLEDDEGNKYGDTQRHLLSYIEACGFNNDLDRAHQCVMYNHRVL
VRRKHLNVKTYSTLMHLWAKKGSLEQIGHLFSLVEEAELKPNLDCYVAALECMGRMENCA
PHVIKRCIQQLNESGFKIQDMFKNCMFHKDEREMVMKAIRVVDPNFQPIFEPELHISQSP
LVKSFYSEVGPVKYPKLDFSFAELKERFDRQLRKEQADTVSIDSVEVIKPITEKMIKMRK
NLTGLRAKWQKYLLWAFRESKFHLADDGNCSWKMNLYPFLCLLDDKEYVDIMLQCINSIP
PNGEALVIIAKELGNRVYNKYSIRRKIKNEMVDKMKDIYHGYVELLAKDTELNNFLPREY
VMHLERKMNLGPSLVSEDSSWPHLLVVQLGTHLVNLMVREIKIPVYTQNEAQKNLIPVLY
HMYSFRSNKQIGFIKPHPILTQMISEAAETTLTFDSSVMPMMCPPIPWTSPKFGAYVLNP
TKLMRCLEGALQHQLLLEKCKSSNLHAVLDSLNQLGNCAWKVNKPMLDLIISIFNDKGSE
KLDIPPPLTEAPDMPKYDSKSDMTPAEKSVLKRKMAWVRKRSAEMHSLRMDALYKLSIAN
HVRDDVFWFPHNMDFRGRTYPCPPYFNHLGSDVTRAILLFAEGKPLGEHGLNWLKIHLVN
LTGFKKSCSLKERLSYANEVMDDILDSADKPLTGRKWWMNADEPWQALACCTEIAHAVRS
PDPTKYVCYFPVHQDGSCNGLQHYAALGRDVIGATSVNLMPCEVPQDVYSGVAKQVEEFR
KRDAEKNVKVAQMLEGFICRKVVKQTVMTVVYGVTQFGGRLQIEKRLKEIEDFPKEYVWD
ASYYLVQQVFNSLKEMFTGTREIQDWLTESARLIAQSGSSVEWVTPLGLPIVQPYHRTRT
TLLKSSLQNLKMQISHDATQQPDTVKQKNAFPPNFIHSLDSTHMMLTALYCYRAGITFVS
VHDCFWTHAMTVDIMNKICREQFVALHNQPILQDLSTFLVNKYRYNIPIDKKPKQLQEYK
RMLQVLSKVLKTGEFDLENVKESTYFFS
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgttaaagctttgcgcgtcccggaacgctggtgttctccctctgaggaagttg
cttcttctctcctcgggctgtcaccggtgcctgcagctaaggagccggcccaccagaagc
tcagagcatccttgggaattcttcagaagaaattactcttctgttatatttaagaaggat
gatggaaagactcaaactagtgagaaggctcatctgttagaggtacttgaagcaagaata
caacaacttcaagcagataatgtgactgaaatgcaatgcacagatgtacaatttgtgaac
agaataaatataactactcaagaaaatcacactgggtcagcgaatctcagttttctgccg
gccagagagtttgacggttctcttaactcaaatacagcagcactcagagaggaaagaaca
gttgaaaaccaactggataaaaaaagctgtgcagaaacagtacatcccaagtctacattt
gctcccaagaagtggatggaaaagttaattaaagaaaaaaataacaaaaccaaaaggcag
ctcagtgttgtgaaaaaaccaaaagaatgcaagaataaaaatgtatacaatgctaagaaa
gtggaacaaggcagaaaaagtagttcaaaaggcaattcaaaaccacgaaaacctaaatct
tctgcattgagtactttacaagcagaatctcagttctcccaggatgctgttcttgctgaa
gtggaacatcttgaaaaacaattcagtaactgggaccgaacagctaagctacttgaagat
gatgagggaaataaatatggtgacacccagcggcatttattatcttacattgaggcctgt
gggtttaacaatgacttggacagagctcatcagtgtgtcatgtacaatcaccgcgttctt
gttcgccggaaacatttgaatgttaagacttacagtaccttaatgcacctgtgggctaaa
aagggttcattagaacagattggccatcttttcagcctggtggaggaagcagaactgaag
cccaatttagactgttacgtggcagcactggagtgtatggggcgcatggaaaattgcgca
ccccatgtgattaaaaggtgtattcaacagctgaatgaaagtggcttcaaaattcaagat
atgtttaaaaattgcatgttccataaagatgagagagaaatggtaatgaaagccattcgt
gttgtagaccccaacttccagccgatttttgaacctgaactgcacatctcccagtctcca
ttggtgaaaagtttttactcagaggttggtcctgtcaaataccccaaattggatttcagt
tttgcagaactgaaggagagatttgacagacagctaaggaaggagcaagcagatactgtt
tctattgattccgttgaagttatcaaacccattacagagaagatgataaaaatgcggaaa
aacctgacaggtttgcgtgccaagtggcaaaaatatcttctgtgggcattccgagaaagc
aagtttcatttggctgatgatggaaattgttcctggaaaatgaacctctatccttttctt
tgccttctggatgataaagagtacgtggacatcatgttacagtgtattaacagtatccct
ccaaatggagaggcattggtgataattgcaaaggaattaggcaacagagtctacaacaag
tattcaatacgaaggaaaattaaaaatgagatggtggacaaaatgaaagacatttatcac
ggctacgttgaactgttggcgaaggatacagagctaaacaatttcctgcctcgcgagtac
gtgatgcatctggaaagaaagatgaacttgggtccttcactggtcagtgaggattcttcc
tggccacatctcctggttgtacaattgggaactcatctcgtgaatctgatggttcgtgaa
attaaaatccccgtatacacccaaaatgaagctcagaaaaatcttattcccgtcttgtat
cacatgtacagctttcgcagtaacaaacagattggcttcatcaaaccacatcctattcta
actcaaatgatttctgaagctgcagaaacaactctgacctttgactccagtgtcatgcca
atgatgtgcccacccatcccatggacttcacctaagtttggcgcctatgttttgaatccc
acaaaactgatgcggtgcttggaaggagccctacagcatcagttgcttttggagaagtgt
aaaagcagtaacttacatgcagtactagattcccttaaccaacttggaaactgtgcttgg
aaagtgaacaaaccaatgcttgatttaattatctctatttttaatgacaaaggaagtgag
aagctggatatcccacctcctctcactgaagctccagatatgcccaagtatgactcaaaa
tctgacatgactccagcagaaaaatctgtcttgaaaagaaaaatggcttgggtcaggaaa
agatcagctgaaatgcacagccttcgaatggatgccctttataagctttccatagccaat
catgtcagagacgatgtattctggtttcctcacaacatggactttcgaggaaggacatac
ccttgccctccatacttcaatcacctaggcagcgatgttactcgtgccatattattattt
gcagaaggaaagcctttgggagaacatggattaaattggttgaaaattcaccttgttaat
ttaactgggtttaaaaaatcatgctccctcaaagagagactttcttatgctaatgaagta
atggacgacatcttggattcggccgataagcctttaacagggaggaagtggtggatgaat
gcagatgagccttggcaagctttagcctgttgcacagagatagcacatgctgtgagatca
cctgatccgactaaatacgtctgctatttcccagtccatcaggacgggtcttgtaatggt
ttgcagcactacgctgctctaggacgtgatgtaattggtgcaacctctgtgaacctcatg
ccctgtgaggtaccacaagatgtctatagtggagtggcaaagcaggttgaagaatttaga
aaaagggatgctgaaaaaaatgtaaaggttgctcaaatgttagaaggtttcatttgtcgt
aaagtcgtgaaacagactgtgatgactgtggtatatggtgtgacacagtttggtgggcga
ctccagattgaaaaaaggttgaaggaaattgaagattttccaaaggaatacgtgtgggat
gcttcatattacttggtgcagcaagtgtttaacagcttaaaggagatgtttactggtacc
agggaaattcaggactggctaacagaaagtgcccgactaatcgcacaatcaggaagctca
gtagagtgggtgactccacttggtttgccaatcgtacaaccataccacaggaccagaact
acattactcaaaagcagccttcagaacttaaagatgcagataagtcatgatgcaactcag
caacctgacacagtcaagcagaagaatgcttttccaccgaacttcattcattctcttgat
tcaactcatatgatgttaacagcactctattgctacagagctggcataacatttgtctct
gtccacgactgcttctggacacatgctatgacagttgatatcatgaacaagatttgccgt
gagcagtttgttgccctacacaaccagcctattcttcaagatctttctactttccttgta
aataaatatcgttataacattcctattgacaagaaacctaaacagcttcaggaatacaaa
agaatgctgcaggtgctgtccaaagttctgaagacaggtgaatttgatctagagaacgta
aaagagtccacctatttcttcagctga
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