Hemitrygon akajei (red stingray): 140739837
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Entry
140739837 CDS
T11019
Symbol
arhgef18b
Name
(RefSeq) rho guanine nucleotide exchange factor 18 isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
140739837 (arhgef18b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
haka04131
]
140739837 (arhgef18b)
Membrane trafficking [BR:
haka04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
140739837 (arhgef18b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
C1_2
SOS1_NGEF_PH
Med31
Motif
Other DBs
NCBI-GeneID:
140739837
NCBI-ProteinID:
XP_072924526
LinkDB
All DBs
Position
16:24424766..24659704
Genome browser
AA seq
1593 aa
AA seq
DB search
MADSPLNNSWPSFSKFWMKRWSFKKECKQCPHTFPRVPESSPPACVNVEARSSSVSEVEE
MYFNRMAEDKDDAFLDYDDSATDATSSTEDIPSLEPSLQGSTSFGELRLPHCPVASSSVD
VTRTEKGSTCLMQLGNLGKEKTFPQLTASCPSQEAMETNSYFTDQENGGCDLKDRTEEDQ
NDNESDPENVMDEEDQDSFPLLIRSMSTSRRHSWEGPLSPSIYGDSRRRLSLDVLGIDSD
AEGDREDEDQLESSQDPSAYEFLETDITAADNTEDNRQAMGIQGKIGRMLPEDVMTEQQI
PRTEMRPRLDAGCAYTFREFQNRSSQSRATGSETSPKNQEEKENLEPNHLLVQQVLQELK
AYHGQCNNAASSARAGSGSPQLHRSASPRDLTWMEFLAEKEDVDKTDRPEKGTKVKRTLS
SLKNRMTGSFKDKGKAKEKEKESPKERRKFNNGHELVLGTFSSSTNCTLCSKPLSSRAGY
QCVNCGVNVHKNCRNLLAECSTSKSKLKDSQQKLTGSPQSTTHHVSSVREQSRCAQVVTD
GMPGTVRNTGMTIPPRRPSQPSSSSASSISNHGVTAGEMEQELENGITRGKPWTEESLSL
VSSSESLVAEDTIYASLKAELEVDSQEFEAESWSFAVDQAYAKKQSKEVIKRQDVIYELM
QTEMHHVRTLKIMLHVYCRGMEEELQLSDQRIVKRIFPCLHQLLEIHKCFFSRLKERRKS
SLEEGSERNYLIQRIGDVLTQQFSGECGDEMKVQYGNFCGQHNEAVNCYKVMYQQNKKFQ
NLIKKLSNYSVVRRLGVQECILLVTQRITKYPVLVERIIQNTEAGSEDHEELTKALALIK
DTITEVDEQVSLYEKAFRWKVIVDRMDIKSTARLKNGSTFDKISMMRSKRKLLHDGVVCW
KAASGRLKDILAVLLTDVILLLQEKDQKYLFATVDQKPAGISLHKLIVREVANEEKGMFL
ISASDEGPEMYEIHTNSKEERNTWMAIIRDAICRYPMEEATVLGEQEEEWRQDEGRVARV
KELQQILTAKDDVLKRTLTEKLDVYNEIAEVNGYLDTGRPRLLLRADSVESLRGDIVFTD
LLKEVEKLQNLIACHPNNINWQLEDNLGSSGLPRRAETFGGYDSSLAGPSKEGSVKRKSN
TLSSSSELKLKERAGARASSDPQLQDLSMEAESGQMSDLSRWYSSSSSVGLCDSEFVQSV
QRLTYLLYKLKVSIAQQDSYIEMLRNMSASWERDRQYRPALSSSRGSLLLEQEKQRNFEK
QREERVNVQKLQNQVRQEQQKWERERDRQKRELELKEARLQDREEELQKRAEQVTQSKEE
LERHRQEYQQDLERLRESQRTVEKDRERLEQQQRKHLKQNPVLVSSEVGQISGLPLDGDR
MEVCLIPPGEAGLALHGVKDPGQPCLLMEHSERSGEIQLQRENSTASMFARNPEIRQSLV
SKPNVPIHLVSATNESLKHTGVQQKIPTKLATLKGGKEKGGKGKDRQSIIGMPSSLVPST
SGSVTADFRQSNPTSIFAKDNAVLRGRRSSSPVISSSQSLPHQEPVVPMDIQLEPQSNTM
PSGRSQLQSAPIATATKQPPSGQDESGNKIIFF
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atggctgactcccccttgaataactcctggccttccttttctaaattctggatgaaacga
tggtcatttaagaaagaatgcaagcagtgtccacacacgtttccccgggttccggagagc
tcgcccccagcctgtgtgaacgtggaagcacggtcgagctcagtcagtgaggtggaggag
atgtacttcaacaggatggcagaggacaaggatgatgccttcctggattatgatgactct
gcgacagatgccaccagcagcacagaggatattccctccttggaaccatctctgcaagga
tcaacgtcctttggagaactccgacttcctcactgtccagtggctagcagttcggtagat
gttaccagaacagagaagggttcaacgtgcctaatgcaacttggtaaccttgggaaagaa
aaaacgttcccgcaacttacagcctcctgtccttcgcaagaagctatggaaaccaacagt
tatttcacggaccaagagaatggcggatgcgatctgaaagacagaacagaggaagatcaa
aatgacaatgagtctgatcctgagaacgtgatggacgaagaagatcaagattcattccct
ttgttgatcaggtccatgtccacctccagaaggcacagttgggaaggaccgttatcccct
tcaatttatggagattcaaggagaaggctcagccttgatgttttgggaattgacagtgac
gctgaaggtgacagagaagacgaagatcagttagaatcctcgcaggacccctcagcctac
gaattcctagaaaccgatatcactgctgcagacaacacagaggacaacaggcaggcgatg
ggaattcaagggaagatcggcagaatgttacctgaggatgttatgactgagcagcagatt
ccgagaacagaaatgcggccgcgactggatgcgggatgtgcctataccttcagagagttt
cagaatcgctcttcccagtccagagcaacaggatctgaaacttctccaaagaatcaagag
gagaaagaaaacctggagcctaaccacttgttggttcaacaagtgctgcaggaactgaag
gcctatcatggacagtgcaacaatgcagcaagcagcgcaagagcaggatcaggatctcca
cagcttcaccgttctgcctccccgcgtgatctcacttggatggaatttcttgctgaaaaa
gaggatgttgacaaaactgatcgacccgagaaaggcacaaaagtgaagagaacattaagt
tccctcaagaacaggatgactggctccttcaaggataagggtaaggccaaagagaaagaa
aaggagagcccaaaagaaaggagaaagtttaacaatggccacgagttagtgcttggaacc
ttttccagctccaccaactgcacgctgtgcagcaaaccgttgagcagtagagccggttat
cagtgtgtgaactgtggtgtgaatgtacacaaaaactgcaggaatcttctagctgaatgc
agtacttccaagagcaagctaaaggattcccaacaaaaacttacaggaagcccacagagc
acaacccatcacgtgtcttcggtgagggaacagtcacggtgtgcacaagtggtcacggat
ggcatgcctggcacagtgcggaataccggcatgaccattccaccaagacgaccttcccaa
ccttcttcatccagtgctagcagtatcagcaatcacggagtaactgcaggggagatggag
caggagctggagaatggaatcacaagaggtaaaccatggactgaggaatctctaagtctg
gtttcatcatctgagtcccttgtggcagaagataccatttacgcctctctgaaggcagaa
ttggaggtagatagccaagagtttgaagctgaatcttggagttttgctgtcgaccaggca
tatgcaaagaaacaaagtaaggaagtcatcaaaaggcaggatgtgatttacgaactaatg
caaacggagatgcatcatgtccgaactctgaaaattatgctgcatgtgtactgccgggga
atggaggaggagcttcagctgagtgaccagcgtattgtgaaaagaatttttccctgcttg
caccagttactggagatccacaagtgtttcttctcccggttgaaggaacggcggaaaagt
tctttggaggaagggagtgaacggaattacctcatccagagaattggggatgtcctcaca
caacagttttcaggtgaatgtggagatgaaatgaaagtgcagtatggaaacttctgtggt
cagcacaatgaagcagtgaattgttacaaagtaatgtatcagcagaataagaagtttcag
aacttgatcaagaaattaagtaactattctgtggtgagacgccttggagtgcaggagtgc
attttattagtcactcaacgcattacaaagtaccctgtgctagtggagaggattattcaa
aatactgaagctggctcagaggatcatgaagagctgaccaaggcattggccctaataaag
gacaccataacagaagtagatgagcaagtgagtctgtacgagaaagctttccgctggaag
gtgattgtggacaggatggatattaagtcgacagccaggctcaagaacggaagcaccttc
gataaaatcagcatgatgcgatcaaagagaaaactcttacatgatggagtcgtctgctgg
aaggcggcgtctgggcggctgaaagacattctggctgtccttttgacagatgtgattctg
ttacttcaagaaaaggatcagaaatatttgtttgccactgtggaccagaagccagctggc
atttcactgcacaagctgatcgtcagggaagtagccaatgaagagaaaggtatgttcctt
atcagtgcttctgacgagggccctgagatgtacgaaatccacaccaattccaaggaggag
cgcaacacctggatggcaattattcgggatgcaatatgcaggtacccaatggaagaggcc
acagtccttggtgagcaggaggaggaatggcgacaggatgagggtcgagttgcccgagtc
aaagaactgcaacagattttgactgcaaaggatgacgtgctgaagcggaccctaactgag
aaattggatgtttacaatgaaatagctgaagtcaatggttacctggacacaggaagacca
cggttactgcttcgagctgacagtgtggagtctctgcggggagatattgtgttcactgat
ttgttgaaagaagttgaaaagcttcagaaccttattgcctgtcatcccaacaacataaac
tggcagttagaagacaacttggggtcctcagggctgccacggcgagcagagacatttgga
ggctacgacagcagcttggccggtcccagcaaagagggctccgtcaaacgaaagtcaaac
acactgtcttccagcagtgaactgaagttgaaggaaagagctggagctcgggcaagttcc
gatccccaactgcaggacttgtccatggaggctgagagtggacagatgagtgatctatct
cgctggtacagcagtagcagcagtgtcggcttgtgtgattcagagtttgttcagagtgtg
cagaggctgacatatctgctctacaagctgaaggtttcgattgcccagcaggacagttat
attgagatgctacgtaacatgagtgcaagctgggagcgggacagacagtaccgacctgca
ctgagttcctctcgcggaagcctgctcctggagcaagaaaagcagcggaactttgagaaa
cagcgtgaagagcgagtgaatgtgcagaagctgcagaaccaggtgcggcaggagcagcag
aagtgggaacgggagcgggaccgccagaaacgggagctggaactcaaggaagctcggctt
caggaccgcgaggaggagttgcagaagagggcagagcaggtgactcagagcaaggaggaa
ctagaacggcatcggcaagagtaccagcaggatctggaacggctccgagagtcccagcgg
acagtagagaaggatagggagcgccttgaacagcagcagcgcaagcacctgaagcagaac
ccagtcctggtttcatctgaagttggacagatttcaggcttacctcttgatggagaccgg
atggaagtatgtctcataccaccaggtgaggcaggattggccctgcatggcgtgaaggac
cctgggcagccatgcttattgatggaacattctgagcgatctggtgaaatccagcttcaa
agggagaacagcacagcctcgatgtttgcacgtaaccctgagattcgacaatcccttgtt
tcaaagcccaatgtgcccattcatctcgtcagcgccactaacgaaagcttgaagcacact
ggagtgcagcagaaaatccccacaaaactcgccaccttaaaaggagggaaagagaagggt
ggaaagggcaaggaccgacaatcaatcattggcatgccctcttcattagtgccatctaca
tcaggatcagttactgcagacttcagacaaagcaatccaacaagcattttcgcaaaagac
aatgcagtactgagaggcaggaggtcttcaagccctgtgatatcaagcagccaaagtctc
cctcatcaagaacctgtggttccaatggacatacagcttgagccacagtcaaacacaatg
ccaagtggaagatctcagctccagagtgcacccattgccacggcgaccaagcagccgccc
agcggacaggacgaatctggcaacaagatcattttcttctga
DBGET
integrated database retrieval system
