Hemitrygon akajei (red stingray): 140739959
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Entry
140739959 CDS
T11019
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18
KO
K14829
pre-rRNA-processing protein IPI3
Organism
haka Hemitrygon akajei (red stingray)
Brite
Ribosome biogenesis [BR:
haka03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
140739959 (wdr18)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_alt
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
NBCH_WD40
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_WDR75_2nd
WDR54
Beta-prop_VPS8
Beta-prop_NWD2_C
Beta-prop_DCAF4
Beta-prop_DCAF12
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
140739959
NCBI-ProteinID:
XP_072924768
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Position
16:33668948..33910618
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AA seq
431 aa
AA seq
DB search
MAAVLEVVLSCDAGGSLWNCNVWEPRSGTTLTSYRGGNTSARALCTLGGEYLLGAQLGKN
YINVWELQRKDQLQQKIVCPGIVTCLAVSPNGLYVTAGIEETIYLWEVPTGNLLLTLSRH
YQELTCIRFTDDSSHFISGGKDNLVIVWNLSSLLQISYTRVPEPQYVWSRHTLPVTDIHC
GVGGPLSRVATASLDQTVKLWEISCGELLMSVLFDVGIMSVALDPCEYYLFCGGNDGSIF
QVNLFAAPVQREKNFQTDKDGSQIFKGHRNQVTCLSVSIDGTLLISGSHDETVRLWDIPS
KQCLRTVSHKGPVTNAFLMIASANMFNPDCRPSTNLPKFSKHVRSSEITENEEGCAITMC
LQHGQKEAQESYLEKSEQLYSVMCAAADKHMLGDGENTKMRVAELEDEVKTLKKINRDLY
DFSVQVLTKQT
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtgttggaggtagtgctgagctgcgatgctggcggttcgctgtggaactgt
aacgtgtgggagccgcgctccgggaccacgctgacgagttaccggggcggcaatacctca
gcccgtgccttatgtactttaggcggcgagtatctgttgggagcgcagctcggcaagaat
tacatcaacgtatgggaattgcagcggaaggatcaattacagcagaagatcgtctgtcct
gggatcgtcacctgccttgctgtctcacccaatgggctttatgtgacggctggaattgaa
gagactatctatttgtgggaggtacctactggaaatcttctcctcacactgtccaggcat
tatcaggagctgacatgcattcgcttcactgatgatagcagccacttcatctcaggaggg
aaagataatcttgtgatcgtgtggaacttgtccagtcttttgcagatcagctatactcgc
gttcctgaaccccagtatgtctggtctcgtcataccttgccagtgacagacatacactgt
ggagttggaggtcccctatctcgtgttgcaacagcatctcttgatcaaactgttaaactt
tgggaaatatcctgtggggaactcttaatgtctgtgctctttgatgttggaatcatgtct
gtggccctcgatccttgtgaatactacttattctgtggaggaaatgatggatccatattt
caggtcaacttgtttgctgcgcctgttcagagagaaaagaattttcagacagataaagat
ggcagtcagattttcaagggacatcggaatcaggtgacttgtctgtcagtctccattgat
ggaacattgctgatttcaggatcacatgatgagacagtgagattatgggacattccaagc
aagcagtgccttagaacagtcagtcataaagggccagtaacaaatgcctttctgatgatt
gcttcagctaacatgtttaaccctgactgcagacccagcacaaatctcccaaaatttagt
aaacatgtacgcagctctgagataacagaaaatgaagaaggatgtgctataaccatgtgt
cttcagcatggccagaaggaggctcaggaaagctacctggaaaaatctgaacagttgtat
tctgttatgtgtgctgctgctgataagcatatgttgggagatggcgagaacacaaaaatg
agagtggctgagttggaggatgaagtgaagacattgaagaagatcaatagggacttgtat
gatttttcagtgcaagttctgaccaaacagacgtaa
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