Hemitrygon akajei (red stingray): 140739962
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Entry
140739962 CDS
T11019
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka02010
ABC transporters
haka04148
Efferocytosis
Brite
Transporters [BR:
haka02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
140739962
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
Motif
Other DBs
NCBI-GeneID:
140739962
NCBI-ProteinID:
XP_072924773
LinkDB
All DBs
Position
16:complement(34204722..34391442)
Genome browser
AA seq
2270 aa
AA seq
DB search
MSYWVQLRLLLWKNFTYRKRQTIQLVIELLWPLFLFFILISVRQSHPPFEQHECHFPNKA
LPSAGTLPWIQGIICNVNNPCFQYATPGETPGVVGNFNQSIVSRLFSDAQKVLHHANKEH
ILQSFHEFMSTLRKLVDNIRPLSGVPLEEYLEKNQTLSQFLMNNASLPKEVVNDLMTAKI
NLDQISLAGLRENLKETVCNISHHSSFLTVKNKKAFNRLHKHLCALPEETLQKARSIFFS
EINFSKLLAERITSSTGNMLDASNALNNIIRRTGNLVQQLSSMTSFSEFRDEVQWLTSPN
TTGSPKTMFQAISKIVCGHPDGGGLRIPSLNWYEDDDYKALFGRNSTNDGMITFDNSTPS
HCKDLIKTLESNPISRIMWRGIKPLFVGKILYTPDTPATLRIMKELNRTFEDLGLLREVQ
AAWNETGPQIWKFMENSQEIHLLQEILKNPEVSSLIDLQLNSTSWSTANITSFLSNQTQE
SEKSYTWKQAYKEIDQIINSLSQVIECISLNKLEAVPTEEKLVVRALQLLAERQFWAGVV
FLNEEQMGSELDSLQPHIKYKIRMDIDDVTRTNKIKDRFWDPGPAADPFDDMRYVWGGFV
YIQDLVEQAIIRVQTGEDKKTGIYLQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVAM
IIKGMVHEKEARLKETMKMMGLTNGILWISWFISSFIPFLISSAFLMLILKKGGILPYSD
PSVVFVFLATFAVATIMQCFLISTFFSGANLAAACGGIIYFSLYLPYVLCVAWRDHVTYP
LRIFASLLSPVAFGFGCEYFSLYEEQGIGIQWFNLVSSPVEDDAYNFITSIILMLLDAIL
YGFATWYIEAVFPGQYGVPKPWYFPILRSYWCGELHSNDDVLQHSDNGNTKKVHLEKEPT
HLKLGVSIQRLVKVYGNGKKVAVNGLSLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPT
SGTAYILGRNIFTEMDTIRKSLGICPQHNVLFDILTVEEHIWFYGRLKGLTEEEVKEEIK
LMIEDIGLEHKRQEQTKNLSGGMQRKLSVAVAFVGGSKVVILDEPTAGVDPYSRRGIWEL
LLKYRKGRTIILSTHYMDEADLLGDRIAIISHGKLCCCGSSLFLKNHLGTGYYLTLVKKE
NDKTTPASSSSTTIGMRKDDSDSERSYDTGLGSEQYSETGALDVSTVLALVQKYVSDTRL
VEDFGHEMTYVLPYIGAKDGAFVELFQELDSRLCELGISSYGISDTTLEEIFLKVAEDTG
VDSDVADGNVPIKRVRCSRSSEQTLQPVSEEGDFDLPDTERVRRKVRTKESKETDFMHCS
DGRGSYQLRGWELTRQQFHSLFIKRFLYARRSHRGLFAQIVLPAMFVFVALLFSLIVPPF
GKYPSLELTPWMYGEQYTFISDDIPEDFSTRELISALLSDPGFGTTCMADGLNLDEHCSQ
GSTEWVTPPIPGSVMSIFLNGNWTMQNPSPTCECSSEESKRMLPECRLGAGGLPPAEMHR
NTGDILQNLTGRNISDYLVKTYPQILSKSLKTKKWVNEFRYGGFSFGARSSQILPSLNEV
NMSITEIRTRLSVTKGSSTDRLLEDITKFIKGLSTKNNTKVWFNNKGWHAMVSFVNVMNN
AVLRANLPPGKDPRLFGITAFNHPLNLTKEQLSEVALMATSVDVLVSICVIFAMSFVPAS
FVLFLVEERVSKAKHLQFVSGVKPGIYWLANFAWDMCNYAVPATMVVIIFICFQQKSYVS
ASNLPALVLLLFLYGWSITPLMYPASFLFSIPSTAYVVLTCVNLFIGINGSVATFVLELF
TDKKLNDVNRILKKVFLIFPHFCLGRGLIDMVKNQAMADALERFGEKQFVSPLSWDLVGK
NMFAMAVQGVVFFLFTILLQYKFFIKMRPVSLKLLSLESEDEDVARERQRVMYGGSDGDI
LVIKDLTKVYRRKKKPAVDRLCVAIPPGECFGLLGINGAGKTSTFKMLTGDTEVSSGEAF
LNGYSILSNIQDVHQNTGYCPQFDAINKLLTGREHLEFYSRLRGVPEHEVAKVAEWGIKK
LGLSRYADRPSGTYSGGNKRKLSTAIALIGCPPVIFLDEPTTGMDPKARRFLWNCILSVI
KEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKSRFGDGYTIILRMHCSALD
LSPVEEFMLCTFPGCVLKEKHHSMLQYQIPTGCCPLAKIFSALTNNKERLKIEDYSVSQT
TLDQVFVNFAKDQSEEEYLKDVVTHGPQYKETVKRITNFLADENVRESSV
NT seq
6813 nt
NT seq
+upstream
nt +downstream
nt
atgagctactgggtacagctcagacttctcctctggaagaatttcacttatcggaaacgg
caaactattcaactggttattgagctattatggcctctctttctcttctttatcttaatc
tcagtacgccagtcccacccaccgtttgagcaacatgaatgtcattttccaaacaaagca
ctaccatcagcagggacactgccgtggatacaaggaatcatctgtaacgttaacaatcct
tgcttccagtatgctacaccaggagaaactccaggagttgtggggaatttcaaccaatcc
attgtttctcggttgttctctgatgcccagaaggtactgcatcatgccaacaaggaacac
attctacagagcttccatgaattcatgagcacattgagaaaactggttgataacatccgt
cctttgtcaggtgtgccactagaggagtatttagagaagaatcaaaccttgtcccagttc
ctcatgaacaatgcatcacttccaaaagaggtggttaatgacttgatgacggcgaagata
aatctcgatcagatatcccttgctggtctaagggaaaatttaaaggagactgtttgcaac
atatcccaccactccagtttcctaactgtaaagaacaagaaggccttcaaccgtttgcac
aagcatctgtgtgccttaccagaggagacgctgcaaaaagcaagaagtattttcttctca
gaaatcaacttctccaaactcttggcggagaggattacatctagtactgggaacatgctt
gatgcatccaatgctttgaacaatataatacgccgaactggaaatcttgttcagcagcta
tccagcatgacgagtttttctgaattccgggatgaagtccagtggttaacaagtccaaac
acaacaggatcaccaaaaacaatgtttcaggccatctcgaagattgtttgtgggcatcca
gatggaggtggactgcgcataccttcactgaactggtatgaagatgatgactacaaggcc
ttatttggtaggaacagcacaaatgatggaatgatcacatttgacaattcaacaccatct
cattgtaaagatttgattaagactctggaatcaaacccaatttctcggattatgtggaga
ggcatcaagccactttttgtggggaaaattctatatactccagatacaccagctacactg
aggataatgaaagagcttaacagaacatttgaggatcttggtttgttgcgagaagtgcag
gcagcatggaatgaaactgggccacagatctggaaatttatggaaaatagccaggaaatc
catctcctgcaggaaatattgaagaaccctgaagtctccagcctaattgacctacagctc
aattctacctcttggagtacagcaaatataactagtttcttgtcaaaccaaactcaggag
agtgaaaagtcttacacgtggaagcaggcttacaaagaaatagatcaaataatcaactct
ttgtcacaagtcattgagtgcatatccttgaacaaattggaagctgtcccaactgaagag
aagttggtggtacgggccttgcagctcctggcagagagacagttctgggctggtgttgtg
tttttgaacgaggaacagatgggttctgaactagatagtcttcagccacacattaaatac
aagatcaggatggacatcgatgatgttactcggaccaataaaatcaaggacaggttttgg
gacccaggacctgcagcagacccatttgatgatatgcggtatgtctggggaggatttgtc
tacatccaggatttggtggagcaggcaattattcgagtacagactggtgaagataagaag
actgggatttatttgcagcagatgccatacccatgctatgtagatgatgtattcttgcga
gttttgaaccgttcattgccccttttcatgacattggcttggatttactcagttgcaatg
ataatcaaagggatggttcacgagaaagaggcacgactgaaggaaacgatgaagatgatg
gggctgactaatggaatattgtggatcagttggttcatcagtagcttcattcccttcctc
atcagctctgcttttcttatgttaatcctgaagaaaggaggcattctcccatacagtgac
ccctctgtagtatttgtattccttgcaacttttgcagttgcaaccatcatgcagtgtttc
ctgatcagcaccttcttttctggggcaaacctagcggctgcatgtggaggaatcatctac
ttctcactctacctcccatacgtcctctgtgttgcctggagagaccacgtcacctaccca
ctccgaatatttgcaagccttttatctccagttgcatttggttttggatgtgaatatttt
tctctctatgaagagcaaggtattggtattcagtggtttaatctcgtttctagtccagtg
gaggatgacgcatacaattttattacttctatcatccttatgctgttagacgccatcttg
tacggctttgccacatggtacatcgaagcagtgtttccaggtcagtatggagttcccaaa
ccctggtatttccctatcctccggagttactggtgtggagaactacattcaaatgatgat
gtgttgcaacattctgataatggaaatacaaaaaaagtccacctggagaaggaaccaact
catctcaaactgggtgtttctatccagaggctagtgaaggtttatgggaatgggaagaag
gtggctgttaatggacttagccttaatttctacgaaggccaaatcacttcattccttggg
cacaatggagcaggaaaaacaaccactatgtctattctcactggactgtttccacccacc
tctggtacagcatacattctgggcagaaatattttcacagagatggataccatcaggaag
tctcttgggatatgtccacagcataatgtactttttgacatactaactgtggaggaacac
atctggttttatggaaggctgaagggcctgacagaggaagaggtaaaagaagaaataaag
ctgatgattgaagatataggtttggaacacaaacgtcaagaacaaacgaaaaacctttca
ggtggcatgcagcgaaagctttcagttgccgtggcatttgttggtgggtcaaaagttgtc
attttagatgaaccaactgctggtgttgacccttactcacgccgaggaatatgggaactc
ctacttaaatatagaaaaggccgcaccattatattatcaacccattatatggatgaggca
gatctccttggagacagaattgccattatctcccatggaaaactctgctgctgtggctct
tcactcttcctcaaaaaccatttgggaaccggctattatttgacattagttaaaaaggaa
aatgataagacaacaccagccagctccagtagcaccaccatcggtatgagaaaggatgac
agtgattctgaaagaagttatgatactgggcttggtagtgaacagtacagtgaaactggt
gcactggatgtgtcaactgttttagcattggtgcagaaatatgtttctgacactcgtttg
gtggaagattttggccatgaaatgacttatgttttaccctatattggggcaaaagatggt
gcatttgtggaactgttccaggagctggacagccgactctgtgagcttggaatttccagc
tatggtatctcggacaccacccttgaagagatttttctcaaagtggctgaagatacagga
gtggacagcgatgttgcagatggaaacgtccctattaaaagagtcagatgttcaagatcg
agtgagcagacactgcagcctgtcagtgaggaaggggacttcgacttgccggatacagaa
cgtgtaagaaggaaagtacgaacaaaagaatccaaagaaacagacttcatgcactgttcg
gatggcagaggctcataccaattgcgtggttgggagctcacccgacagcagttccactct
ctgttcatcaaacgatttctctatgccagacgaagccacaggggactctttgctcagatt
gtgctgcctgcaatgtttgtctttgttgccctactcttcagtcttattgtgcctccattt
gggaaatatccatcattagagttgactccctggatgtatggagaacaatacactttcatc
agtgatgatataccagaggatttcagtactcgtgagctgatcagtgcactcctcagtgac
cctggatttggtactacatgtatggcagatggtttgaatttagatgaacattgctcacaa
ggcagtactgaatgggtaactccccctattcctggatcagtcatgagcatttttctcaat
ggtaactggacgatgcagaacccatctccgacgtgtgagtgtagctcagaagagagcaag
aggatgctgcctgaatgtagactaggagcaggagggcttccacctgctgagatgcatcgg
aatactggggatatacttcagaacctgactggcaggaatatctctgactatcttgtgaag
acctacccccaaatccttagtaagagtctgaaaaccaagaagtgggtgaacgagttcagg
tatggaggattctcctttggagcacgaagttctcagattttaccttcgctgaatgaagtt
aatatgtccatcactgagatcaggacacgacttagtgtcacaaagggaagttccacagac
cgactgctggaagacattacgaagtttatcaaagggctgagcacgaagaacaatactaaa
gtgtggttcaacaataaaggttggcatgctatggtgagctttgtgaatgtgatgaataat
gcagtattgagagcaaatcttccaccaggaaaagaccctcgtctatttgggattacagcc
ttcaatcaccccctcaacttgaccaaagaacaactttctgaggttgcattgatggctacc
tcggttgatgtgcttgtctccatttgtgttatctttgccatgtcctttgtgccagccagt
tttgttctctttctcgtcgaagagcgcgtcagcaaggctaagcaccttcagtttgttagt
ggcgtgaagcctggcatttattggcttgctaactttgcatgggatatgtgtaattatgca
gtacctgccacaatggttgtcatcatcttcatctgcttccaacaaaagtcctatgtgtct
gcctctaatttgccagccttagtcctcctactgtttctttatgggtggtccattactccc
ctcatgtatcccgcctcctttctgttcagcattcccagcacagcctatgtggtgttgacc
tgtgttaacctgttcattggcatcaatggcagtgtagccacctttgtcctggagctcttc
acagacaaaaaattgaatgatgtcaatcgaatcctgaagaaagtattcctcatattcccg
catttctgtttgggtcgaggattaattgacatggtgaagaatcaagccatggcagatgct
ttggagaggtttggagagaagcagtttgtgtctccactctcctgggacctggtggggaag
aacatgtttgctatggctgtccagggagttgtcttctttctgttcacaattttattacag
tacaagttcttcatcaaaatgaggcctgtgtcactgaagcttctttctctggaatcagaa
gatgaggatgtagccagagagaggcaaagggtcatgtatggtgggagtgacggtgacatt
ctagttatcaaggatctcaccaaggtttacagaaggaaaaagaaaccagctgtggatcga
ttgtgtgtggcaattcccccaggggagtgttttggacttctggggataaatggagctgga
aaaacatccaccttcaagatgctgacaggagatactgaggtcagcagtggtgaggccttc
cttaatggatatagcattctgtccaatatccaggacgtccaccaaaacactgggtactgc
ccacagtttgatgccatcaacaaactgttgacaggacgagaacatctagagttttactca
aggctgcgtggtgttcctgaacatgaagttgctaaggtcgctgaatggggcataaagaaa
ctcggactctcccgctacgcagatagaccgtctggcacatacagcggtggcaacaaacga
aagctgtccactgccattgcactgattggatgcccgcctgtcatctttctggatgaacct
acaactggaatggatcccaaggcaaggcgattcctttggaattgtattctgagtgtcatc
aaggaaggaagatcagtggtactgacctcacacagcatggaggaatgtgaggctctgtgc
acacggatggccatcatggtgaacggacggttccgctgtctgggcagtgtgcaacacctg
aaaagcaggtttggagatggttataccatcattctgaggatgcattgttctgcactggac
ctgtcccctgtggaagaattcatgctgtgcacattcccaggatgtgtattgaaggaaaag
caccacagtatgctgcagtaccagataccgactgggtgctgccccctggccaagatcttc
agtgcactcacaaacaacaaagaaaggctaaagattgaagactattcggtgtctcaaacc
acattagatcaagtatttgtcaattttgccaaggatcaaagtgaagaagaatatttaaag
gacgttgtaacacatgggccacaatataaggaaacagtaaagcgcatcacaaattttcta
gcagatgagaatgtgagagagagttcggtatga
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integrated database retrieval system
