Hemitrygon akajei (red stingray): 140740203
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Entry
140740203 CDS
T11019
Symbol
colgalt1b
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka00310
Lysine degradation
haka00514
Other types of O-glycan biosynthesis
haka01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
140740203 (colgalt1b)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
140740203 (colgalt1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
haka01003
]
140740203 (colgalt1b)
Enzymes [BR:
haka01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
140740203 (colgalt1b)
Glycosyltransferases [BR:
haka01003
]
O-Glycan biosynthesis
O-linked Gal type
140740203 (colgalt1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Aminotran_4
Motif
Other DBs
NCBI-GeneID:
140740203
NCBI-ProteinID:
XP_072925344
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Position
16:complement(76752827..76808666)
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AA seq
604 aa
AA seq
DB search
MSCRSLLFATLFPALTLAYFPEERWSEESPLLPPRVLIAIIARNSAHGLPAFLGRVEGLR
YPKDRLSLWIATDHNVDNTTAVLREWLVNVQRFYHSIEWRPMDEPKSYPDEIGPKHWPDS
RYEHVMKLRQAALKAARDRWADYILFVDTDNFLTNPNTLTLLIAENKTVVAPMLDSRSAY
SNFWCGMTSEGYYKRTPAYPPIRKRDRLGCFPVVMVHSTMLIDLRKEASKKLAFYPPHPS
YTWSFDDIIVFAYSCKQAGVQMYINNKEHFGFLQVPLKSTSTMQDEVESFMHIQLEVMVN
HPPMEPSKFLPVPPKYPDKMGFDEVFLINLKRRPKRRMRMLRSLYEQEIACEVFDAVDGR
AFNSSQIKELGITMLAEYEDPYSGRPLTKGELGCFLSHYNIWKEIVDRGLQKSVLFEDDL
RFEIFFKRRLKYLMKEVEKVKLDWDLIYIGRKRMQVDHPEKAVPGVRNLVVADYSYWTLG
YVLSLNGAKKLIDSKPFDKMLPVDEFLPIMYNKHPISKYMDHFEKRNLKAFSVEPLLVYP
THYTGEAGYVSDTETSTVWDNEKLKTDWDRAKSQKTREQVKIREAAQNLDVSHSPIDSTS
RDEL
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgccgctcgctgttgttcgccacgctcttccccgctctgaccctggcctacttc
ccggaggagcgctggtccgaggagtcgccgctcctgcccccgcgggtcctcatcgccatc
atcgcccgcaacagcgcgcacggactgcccgccttcctgggccgcgtcgaggggctccgg
taccccaaggacaggctcagtctgtggattgctacggaccacaatgtggataacaccaca
gcagtactgagagaatggctggtgaatgtacaaagattttaccattccattgaatggaga
cccatggatgagccaaaatcttaccccgatgaaatcgggccaaagcattggccggactct
cgatatgaacacgtgatgaagctacgacaagcagcactgaaggcagccagagaccgatgg
gctgattacattttgtttgtagatacagataacttcttaaccaatccaaacaccctaact
ctactcatcgctgagaataagacggttgttgcacccatgttggactcgcgctctgcctat
tccaatttctggtgtggaatgacctcagagggttattataaacggactccagcctaccct
ccgatacggaaacgggacagactcggctgtttcccggtggttatggtacactccacaatg
ctgattgatcttcgcaaagaagcctccaagaaactggctttttaccccccacatccatcc
tacacctggtcttttgatgacatcatagtctttgcatattcatgcaagcaagcgggagtc
cagatgtacatcaataataaagagcactttgggttcctgcaggtacctctgaagtcgacc
agtaccatgcaagatgaggtggagagttttatgcatattcagctggaggtgatggtgaat
caccctcccatggagccttctaaatttctgcctgtgcctccaaaatacccagataagatg
ggctttgatgaggtttttctgattaacttgaagcgacgcccaaaacggagaatgcgaatg
cttcgttccctgtacgagcaggagatcgcctgtgaagtctttgacgcagttgatggaaga
gctttcaacagcagtcagattaaagaacttggcatcacaatgttggcggaatacgaagac
ccatattcaggacggcccctaactaaaggggagctgggctgtttcctcagtcactacaac
atctggaaggagattgttgaccgaggattgcagaagtcggtgctatttgaagatgatcta
cggtttgaaatcttcttcaaacgaagactgaagtacctgatgaaggaagtggagaaagtt
aaactcgactgggacctaatttacattggccgaaaacgaatgcaggtggatcacccggag
aaggcagtgcctggcgtccgaaatttggttgtggccgattattcttactggactctggga
tatgtcctctcgctgaatggagcaaagaaactcattgattccaagccgtttgacaaaatg
ttaccagtggatgaatttctacccataatgtacaacaaacacccgatatccaagtatatg
gatcactttgagaagcgtaacctgaaggctttctccgtggagccgcttctggtctacccc
acgcactacacgggtgaggcgggctatgtcagtgacactgagacctccacggtctgggac
aatgagaagctgaagactgactgggaccgcgccaagtcgcagaagaccagggagcaagta
aagatccgggaagcagctcagaaccttgacgtgtcgcattcaccgatcgactcaacctcc
agggatgagctgtga
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