Hemitrygon akajei (red stingray): 140740241
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Entry
140740241 CDS
T11019
Name
(RefSeq) vascular cell adhesion protein 1-like
KO
K06527
vascular cell adhesion molecule 1
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04514
Cell adhesion molecules
Brite
Cell adhesion molecules [BR:
haka04515
]
Immunoglobulin superfamily
VCAM
140740241
CD molecules [BR:
haka04090
]
Proteins
140740241
Lectins [BR:
haka04091
]
I-type lectins (Siglecs)
140740241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
I-set
ig
C2-set_2
ICAM1_3_5_D2
C1-set
Ig_4
ICAM_N
V-set
PLCB1-4-like_EFh
Motif
Other DBs
NCBI-GeneID:
140740241
NCBI-ProteinID:
XP_072925443
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Position
16:complement(83111629..83150339)
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AA seq
785 aa
AA seq
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MNFRPISLNETIFVFILLFIVIDKLNGFEVLVNTSPQAVEFGESLEVTCSTTCNNASIIV
EYKAGLNPIRTLGDKWITDRFSSVQKWDLAMPCTVICPSIKPTAKEDKRVVPVYNRNLSI
VPPPEVLEVNKPYQLECTGPKVFPNNRLVLTWLRGSETVQHNSTEDLGLPEDGPLKNVLN
FIASISDDGMVYTCLADLILDSNTTIQIANASVTLQTYYRNLSIAPPPEVLEVNKSYQLE
CTGPKVFPNNRLVLTWLRGSETVQHNSTADPGLPEDGPLKNVLNFNASISDDGMVYTCLA
ELILDSYATRQIANASVTLQTYSFPEPPMILNRDPVEVNRETTLTCEVSNIYPTEKVRLR
WFQDGKEWNSVAIRSNSTTVQATATWTPREIGVTELNCMADFENYPSVSSKNDSITIDMY
VFSNPEIHIPITTEGIPVNITCSVLDVSGELQLRLKKGSEILVNRSASTGLTIYHTVNPR
ADLNGQQFTCEAELTLDHHSNTIVKQQSTALIVWYSPKKAQISGKQDWIEGESQILTCRA
DANPVPDVHWIKDGKTISRGERLHVPSVQLGDSGRYICGVSNDIGSTSSSHDVEILYKPR
NTTISVNNKTVSGLTVFIREDDEVTMTCHSIGNPQVTLEWEKPGQGVKGFSTFPGSPGVL
HISQATSEHKGIYKCRASNELGTDEEQVEIKMEGDDWKMALIISLAIVIPLLLLVVAYVR
INRARKTGHYKVMNAVPHKNQEIPSGNDQVSFPLKEVNSDKVLNNNHSQTNINGVTSINS
AQIKQ
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcaggccgatttcactgaacgaaacaattttcgttttcattttactctttatc
gtaatagataaactgaatggatttgaagttttggtcaatacaagccctcaagcggtggaa
ttcggagagtctctggaggtgacctgcagtacaacatgtaacaatgcatcgatcattgtg
gaatataaagcagggttaaatcccatcagaactctcggtgataagtggattacagacaga
ttttcgagtgtccagaaatgggatctggcaatgccctgtactgtaatctgtccatctata
aaacctacagcgaaggaggataaaagggtggtcccagtgtacaatcgaaacttaagcatt
gttccacctcctgaagtgctggaagttaacaaaccatatcagctggagtgcactggccca
aaggtctttccaaataacagactcgtactcacctggctcagagggagtgagactgttcaa
cataattccacagaggacctaggtctcccggaagatggtccattgaagaatgtccttaat
ttcattgcaagtatttctgacgatggaatggtgtacacctgcttggcagatttgatcttg
gactctaacacgaccatacagatcgcaaatgcctctgtgactctgcaaacgtattatcga
aacttgagcattgctccacctcctgaagtgctggaagttaacaaatcatatcagctggag
tgcactggcccgaaggtctttccaaataacagactcgtactcacctggctcagagggagt
gagactgttcaacataattccacagcggacccaggtctcccggaagatggtccattgaag
aatgtcctgaatttcaatgcaagtatttctgacgatggaatggtgtacacctgcttggca
gagttgatcttggactcttacgcgaccagacagatcgcaaatgcctctgtgactctgcaa
acgtattcttttccagagcctccaatgatcctcaacagagaccctgtagaagtaaatcgg
gagaccacattgacatgtgaggtctcaaacatctaccctaccgagaaggtgagattaagg
tggtttcaggatggtaaggaatggaattcagttgccattagatcaaattccaccacagtc
caggcaacagctacgtggacaccacgagagatcggtgtgactgaactcaactgcatggca
gattttgagaactatccatcagtttcatcaaagaatgatagcatcaccattgacatgtac
gttttctccaaccctgaaatccacatcccgatcaccactgagggtattccggtgaatatt
acctgcagtgtgcttgacgtctcaggggaacttcaactcagactgaagaagggaagtgag
atattagtgaacaggtcagccagtactgggctgactatctaccacactgtgaatccacgt
gcagacctgaatggacagcagttcacctgcgaggccgagctgacacttgaccatcactcc
aacaccattgttaagcaacagtccaccgctctcattgtctggtattctccaaagaaagca
cagatctccggaaagcaggactggattgaaggggaatcccagattttaacctgtcgcgca
gatgccaacccagttcctgatgtgcactggatcaaagatggaaaaacgatcagtcgtggt
gagagactgcatgtcccctcggtccagctgggagacagtggtcggtacatttgcggagtc
agcaatgatattggttccaccagctcctctcatgatgtagagatcttgtataaaccacga
aacacaactatatcagtaaataacaaaaccgtgtccgggcttacagtcttcatcagagaa
gatgatgaagttacaatgacctgtcactccattggaaacccccaagtaacactggaatgg
gaaaagcccggtcagggcgtcaaagggttctccacatttcccggcagtcctggggttctc
cacatttcccaggcaacatcagaacacaaaggaatttacaagtgtagagccagcaatgaa
cttggaacagatgaggagcaagtggaaatcaagatggaaggtgatgattggaagatggcg
ctgattatctcgctagccatcgtaataccgttactcttgctggtagtcgcctacgtccga
ataaacagggctcggaaaacagggcattacaaggtcatgaatgcagtaccccacaaaaat
caggaaatcccttctgggaatgatcaggtatcttttcctttaaaagaagtgaattcagac
aaagttctaaacaataaccactcacagactaatataaatggtgttacatcgatcaattct
gcacagataaaacaataa
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