Hemitrygon akajei (red stingray): 140740507
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Entry
140740507 CDS
T11019
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haka03019
]
140740507 (trim71)
04121 Ubiquitin system [BR:
haka04121
]
140740507 (trim71)
Enzymes [BR:
haka01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140740507 (trim71)
Messenger RNA biogenesis [BR:
haka03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140740507 (trim71)
Ubiquitin system [BR:
haka04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
140740507 (trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-C3HC4
DUF5711
zf-RING_UBOX
PspA_IM30
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
140740507
NCBI-ProteinID:
XP_072925816
LinkDB
All DBs
Position
17:complement(17514495..17560948)
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AA seq
889 aa
AA seq
DB search
MWLSRSLHRGAVLAEEAERLPSRPAELAQGHFYPRCYQRSEAAMAAPFCGQEQQQQPPPC
QEQQGLGPARPEAPPPRQEPLPPPQQQQCGLCCARGPGSRSRSSPADELRLLPCRHSFCQ
ACLEAHGGRRRRPGGPSSNNNGGPAPHRVRPEAEPSPPAASSSSSSSSSLANSCGPPDLA
CPICDSRMPAADNDGLPADLLLLNNLLDVVSAAEDELDGGVQRRSRAKGSQSGCSSCDEG
APVTSRCMDCAEYLCDHCVRAHQRVRLTKEHVIQRFRQHHYNQQPFASLPLAHDRLSYCQ
HHDNQVMRLYCDTCAVPICRECTMSRHVGHSFVYLQDAVQDSKEITLQLLADAQQGRQAI
QLSIEKVRAMVEQVEMKAQVIRSEVKAVTSRHKKALEERECELLRKVEKIRQMKAKTLHL
QVEALRENLSRLESTIDCVQKALLDGRDVDVLLAKEQMFVQIQDLKKLRNLLQPQDDDTL
SFIPPDGVLYKAIKSLGIISSSAYAPLSTAAGEGLKRALRGKMSSFTVITKDHTGEGRSS
GGDLVVVVIMGPDGCLFRADVLDHHDGTYTVNYSPHLEGEHVVSVTIRGQHIENSPFRVI
VKAGRNYTGIGLPICSFGGEGDEDGQLCRPWGVCVNKEGYIIIADRSNNRVQVFTPSGTY
HHKFGTAGSRPGQFDRPAGVACDQNCRIIVADKDNHRIQVFTFEGQFILKFGEKGSKNGQ
FNYPWDVAVNTDGKILVSDTRNHRVQLFGPDGNFVSKYGFEGALWKHFDSPRGVAFNHEG
HLVVTDFNNHRLLVIHPDFQSARFLGSEGTSNGQFLRPQGVAIDQEGRIIVADSRNHRIQ
IFEPNGNFLCKFGTQGSGFGQMDRPSGIALMPDGLIVVVDFGNNRILLF
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgtggctatctcgctcgctgcacaggggagcggttctcgctgaggaagcggagcggctg
ccctcccggccggccgagctggcccagggccacttctacccacgctgctaccagcgctcc
gaggccgccatggccgcaccgttctgcggccaggagcagcagcagcagccgccgccgtgc
caggagcagcagggcctaggcccagcccgacccgaagcgccgccgccgcgacaggagccg
ctacctccgccgcagcagcagcaatgcggcctctgctgcgcccggggccccgggtcacgc
tcccgttccagcccggctgacgagctgcggctactgccttgccgccactccttctgtcag
gcgtgcctagaagctcacggcggcaggcgacggcggcccgggggccctagcagcaacaac
aacggagggccagcccctcaccgtgtccggcccgaggccgagccctcgcctcccgccgcg
tcttcctcctcttcttcctcctcctccttggccaactcgtgcgggcctcccgacctggcc
tgccccatctgcgacagccgcatgccggccgccgacaatgacgggctgcccgccgacctg
ctgctgctcaacaacctgctggacgtggtgtcggcggccgaggacgaactggacggaggc
gtgcagcggcggagccgcgccaagggctcgcagtcgggctgcagctcctgcgacgaaggc
gcgccggtgacctcccgctgcatggactgcgccgaatacctgtgcgatcactgtgtccgg
gcgcaccagcgggtccggctcaccaaggagcatgtcatccagcgcttcaggcagcaccat
tacaaccagcagccgttcgccagcctgccgctcgcacatgaccggctcagctactgccag
caccacgataaccaagtgatgcgtctgtactgtgatacctgcgctgtgccgatttgtcga
gaatgcacaatgagccgtcatgtaggtcacagctttgtctacctccaggatgccgtacag
gactccaaagaaataaccttacagttattagcagatgcacagcaaggccggcaggccatt
cagctcagtatagagaaggttcgagctatggtggaacaagtagagatgaaagctcaagtt
attcgatcagaagtcaaagcggtaacttcacggcacaagaaggctttagaggaacgtgaa
tgtgagctattacgaaaagtggaaaagatccggcaaatgaaggccaagactctacacctc
caagtagaagcactgcgtgagaatttatccaggctggagagcacaatagactgtgtgcag
aaggccctattagatgggcgagatgtggatgtactcttggcaaaagagcaaatgtttgtc
caaatccaagatctgaagaaacttaggaatctccttcaacctcaggacgacgacaccctt
tcgttcattccgcctgatggtgtattatacaaggccatcaagtcattaggcataatcagt
agcagtgcatatgccccactatctacagctgctggtgagggactgaaacgagcactgcgt
gggaaaatgagcagcttcaccgtgatcaccaaggatcacactggcgaagggagatcatct
ggtggtgatttggtagtagttgttataatgggacctgatgggtgtctctttcgagcagat
gttcttgaccatcatgatggcacctatacagttaattactccccacatctggaaggagag
catgtagtttcagttacaatccgtgggcagcatattgagaatagccccttccgtgtaatt
gtcaaagcaggtcgtaactacactgggattgggcttccaatttgctcttttggtggagaa
ggggatgaggatgggcagctctgtcggccatggggtgtctgtgtcaacaaagaaggttat
atcattattgctgatcgtagcaataaccgtgtccaggtgttcacaccaagtgggacatat
caccacaagtttggcacagcaggttccagacctggacagtttgatcgtccggctggtgtt
gcatgtgatcagaattgtcggatcatagtggccgataaggacaaccaccgtattcaggtt
ttcacttttgaggggcagttcatccttaaatttggggagaaaggaagcaaaaatggtcaa
ttcaactatccttgggatgttgctgtcaatactgatgggaaaatcctggtgtcagacacc
cgcaatcacagagtccagctttttgggccagatggaaactttgtcagtaaatatggcttt
gagggggctttgtggaagcactttgattctcctcgtggagtggcctttaaccatgaagga
cacctagtggtaacagatttcaacaatcaccggctgctggtaatccaccctgacttccag
tcagcgcgcttccttggttccgaaggcacaagcaacgggcagttcctccgacctcagggt
gtagcgattgaccaagaaggccgcatcattgtagccgactccaggaatcatcgtattcag
atctttgaaccaaatggcaacttcctgtgcaagtttgggacgcaaggcagtggctttggg
cagatggaccgtccatctggaatagccctaatgccagatggactgatagtagtagtcgac
tttggcaacaatcgtatcctcctgttttaa
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