Hemitrygon akajei (red stingray): 140740514
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Entry
140740514 CDS
T11019
Symbol
katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
haka04812
]
140740514 (katnb1)
Cytoskeleton proteins [BR:
haka04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
140740514 (katnb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Katanin_con80
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_Vps41
WD40_RFWD3
eIF2A
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_RIG_1st
Beta-prop_LRRK2
WDR54
Beta-prop_DCAF12
Beta-prop_IP5PC_F
RMC1_N
Beta-prop_NWD2_C
Beta-prop_VPS8
Cytochrom_D1
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
140740514
NCBI-ProteinID:
XP_072925825
LinkDB
All DBs
Position
17:18207568..18282166
Genome browser
AA seq
657 aa
AA seq
DB search
MAVSGPTKIAWKLQEFVAHAGNVTCLVLGKNSGRLLATGGEDCRVNLWSVSKPNCIMSLT
GHNSPVECIQFKDSEELVVAGSQSGSLRIWDLEAAKILRTLSGHKANICSLDFHPFGEFV
ASGSMDTNVKLWDIRRKGCVMTYKGHTNAVRCLRFSPDGRWIAAAGDDSTVKLWDLSAAK
ILTEFTDHTAPVNTVEFHPNEYLLASGSSDRTIKFWDLEKFKMVSCTEVESTPVRCILFN
PDGCCLYSGSQDSLHVYGWEPPRCFDVLPVNWGRAADLAICSNQLIGASFSQVTVSTFVV
DLNRVKKTGSIVQGTVEDEKLFNLSEMKGAALRRNYERPLTTCNRPQSKVKEELENEGRN
PGAEEEKDDKESTAEIRNPEEYKEIFQPHNAIARTPPRRSDPFPAPPEDDTILVKESEKV
TPPTEMHSTTVKRLQADQLNFPPAAASTPNNRPEAAIIPIAKNEPIGLKAADFLPSQNNK
LADLTDEDAVSQIQKGHDTMCVVLKSRFKNLDTVRAVWSTGDIKTSIDSAVTMNDLAVIV
DILNIINLKPALWKLDLCPSIIPQIDKLLQSKYESYVQTGCTSLKLILQRFGLLIADNLV
TPPSIGVDITREERHQKCKLCYKQLKNLLPILQSKAGIPGRQGSAFRELQLLMAAFE
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcagtttcgggaccgacgaaaatcgcttggaagctccaggagtttgttgcacatgct
ggaaatgtaacctgtctggtgttggggaagaattcgggcagattgttggccactggtggt
gaagactgtcgcgtcaacttgtggtcagtcagcaaaccaaactgtattatgagtcttaca
ggtcacaactcaccagttgaatgcattcagtttaaagactccgaggagttggttgttgca
ggctcacagtctggatcactgagaatatgggatttggaagcagctaagatccttcggaca
ctgtctggtcacaaggccaacatttgcagtttagactttcatccttttggagagtttgtg
gcctctggttctatggataccaatgtaaagttgtgggacattcggaggaaaggatgtgta
atgacatacaagggacacacaaatgctgtacggtgtctacgattcagtcctgatgggcga
tggattgctgctgctggagatgatagcaccgtgaagctgtgggatttgtcagcagcaaaa
attttaacagaatttacagatcacactgcacctgtaaatacagtggagttccaccccaat
gagtatttgctggcttctggcagctcagacagaacaataaagttttgggacctagaaaag
tttaagatggtgagctgtacagaagtagagagtactcctgtcaggtgtattttgttcaat
ccagatggttgttgtctatacagcggatctcaggattcattgcatgtatatggatgggaa
cctccacgttgttttgatgtacttcctgttaattggggtagagcagcagaccttgccatc
tgttccaatcagttgattggagcttcattcagtcaggtgacagtctcaacgtttgtggtg
gatctgaatagagtgaagaagactggttcaattgtccagggcacagttgaagatgaaaaa
ctcttcaatctatcagaaatgaaaggagctgcactcagacgcaactatgagcggccctta
accacatgcaacagacctcaaagcaaagtgaaagaagagctggagaatgaaggaagaaac
cctggtgcagaagaggagaaggacgacaaggagtcaactgcagagatccgaaacccagag
gaatacaaggagatctttcagccacacaatgccattgctcgaactccacctcggcgatct
gatccattccctgctccaccagaagatgataccattttagtaaaggaatctgagaaagtg
actcctccaacagagatgcactctaccacagtaaagagattacaggcagatcagctgaac
tttcctccagcagcagcttccactcccaacaatcggcctgaagcagcaataattccaatt
gccaaaaatgaacccattggtttgaaggcagcagattttctcccatcccagaataataaa
ttggcagatttgactgatgaagatgctgtgagccaaatccagaaaggacatgataccatg
tgtgttgtattaaaaagtcgattcaagaatttagacacagtgagggctgtgtggagcact
ggagatatcaagacttccatagactcggcagtgaccatgaatgacttagcagttattgta
gacattttgaacattattaaccttaaaccagcattgtggaaattggacctctgcccttca
atcattcctcagattgacaagctgttgcagagcaagtatgagagttatgtccagacaggc
tgtacttctctgaagctaatcctgcagcgatttggcctcttaatagctgacaatttggtt
accccaccatcaattggggtagacataacacgggaggaaaggcaccagaagtgcaaactt
tgttataagcagttaaaaaacttgcttccaattcttcaaagtaaagcaggaataccgggc
cggcaaggtagtgcctttcgtgaactacagcttctaatggcagcttttgaatga
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