Hemitrygon akajei (red stingray): 140740637
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Entry
140740637 CDS
T11019
Symbol
irx6a
Name
(RefSeq) Iroquois homeobox protein 6a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haka03000
]
140740637 (irx6a)
Transcription factors [BR:
haka03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
140740637 (irx6a)
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
SID-1_RNA_chan
POTRA_TamA_1
Motif
Other DBs
NCBI-GeneID:
140740637
NCBI-ProteinID:
XP_072926079
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Position
17:complement(40336616..40342253)
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AA seq
479 aa
AA seq
DB search
MVTKGAAMSFSQFGYPYNTTSQFFVSASPSTACCEPGSRPVSEGSAGPAQTAICCPNYDN
RLLANARTEINAAAAALGMYSSPAYATAASQSYGNYLTYSTDPSAFYSSLNSQYEIKDST
GSLHSGIAPTATYYPYEHSLGHYQYDRCGTVDFSGTTRRKNATRETTSTLKTWLYEHRKN
PYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPRNKGGDDKKEESARRDR
EEHGTDSMENDEKEYRESKELRLSDLEDDESEKLESDHEKAPSEIRSRRGLIETEGNDCN
VSPSNNLHTSCSKNCSTLESDFLDTITNKPSVSVASNSLPQRFGTAEKPRIWSLAHTAAS
NCLVGCQNGQSRIARYCAEVRPSQGMVNQVDDIISLGDSSQAARILRTSTFNLQTLVAAG
QLHCASYPALDNCQYTSGTEGFLRNVKSDLGATDITETCLLRQEERVRAAFRPVLKRFG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggtaacaaaaggagcagcgatgtcgttctctcagtttggatacccttacaataccact
tcacagttcttcgtgtcagcgagtcccagcacggcgtgttgcgaaccaggctccagacct
gtatccgaaggctccgctggcccggcccagactgccatttgctgtcccaactacgataac
agactgctggccaacgccaggaccgagatcaacgcagctgccgcggcgctgggcatgtac
agcagtcctgcttatgcaaccgcagctagccagagctatgggaactaccttacatacagt
acagatccttcagctttctactcttcactgaattctcagtacgaaattaaagatagcact
gggagcttgcactcgggaattgctccgacagctacttactatccgtatgaacactccttg
ggacactaccaatacgacagatgcggcaccgtggacttcagcggcaccacacggcgcaag
aatgcgacccgagaaactaccagcaccctgaagacttggctatacgaacacaggaagaac
ccttaccccaccaaaggcgagaagatcatgctggccatcatcacgaaaatgacgctgacc
caagtgtccacctggtttgcgaacgccaggaggaggttgaagaaggaaaataaaatgacc
tggtcacccagaaacaaaggaggggatgacaagaaagaggagagtgccagaagggacaga
gaggaacatggaacggacagcatggaaaacgatgagaaagaatacagagaaagcaaagag
ttgagactgagcgatctggaagatgatgagtcagaaaaactagaaagtgaccatgaaaag
gcaccaagtgaaatcagatcgaggagaggcttgatcgagactgaaggcaatgactgcaat
gtatctccttcaaacaacctgcacacttcctgttccaaaaactgttctaccctcgagtcc
gactttctagatacgataacgaataagccatctgtttctgtcgcaagcaacagcctcccg
cagcgcttcgggacagcggagaagccgaggatttggtccctggcgcacacggcagcctcc
aattgtctggtgggttgtcagaacggccagagccggattgcgaggtactgcgcggaggtg
aggccatcccagggcatggtgaaccaagtcgatgatataatttccctcggagactcttca
caagccgcccgcattctgagaacttctacattcaacttacaaacgcttgtagcggctggt
cagttgcactgcgcttcctaccctgcgctagacaactgccagtatacatcagggactgaa
ggatttttaagaaatgtgaaatctgatttgggggcaacagatattacggaaacgtgtcta
ctgcgccaggaggagagagtgagagcggccttcagacctgtgctgaagaggttcggttag
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