Hemitrygon akajei (red stingray): 140740639
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Entry
140740639 CDS
T11019
Symbol
irx5a
Name
(RefSeq) Iroquois homeobox protein 5a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haka03000
]
140740639 (irx5a)
Transcription factors [BR:
haka03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
140740639 (irx5a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
140740639
NCBI-ProteinID:
XP_072926081
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Position
17:complement(41036704..41079587)
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AA seq
452 aa
AA seq
DB search
MSYPQGYLYQPSASLALYSCPAYSTSVISGPRTDELGRSSSGSAFSPYAGSTAFTAPSPG
YNSHLQYGTDPTAAFTSYVGSPYDHSTGMAGSIGYHPYAAPLGSYPYGDPAYRKNATRDA
TATLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRNR
SEDEEEEENIDLEKNDEDEPQKPLEKGNSSEPEPGNQKTSVVEIACERFEEQHSNKDEQI
LSDSEFKDSEEKEILHSPKATTSSLVVPHGTEILHESHDSDLENVHTNLAHTLPSNTANC
SVTSVIHSPPATTSKPKLWSLAEIATSDKSKEQSEQPSTCPGHGCAVSASASSPSRSPCP
YPNSAVLGRPLYYTSPFYTGYTNYGTFGHLHSHHGSSSTNHFSSNGLSQTVLSRAEALAK
LCPESKTKSPAPVDHCKDTSSYELKKGDESLF
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatcctcagggttacttgtaccaaccgtcagcttcgttagctctttactcgtgt
ccagcgtacagcacgagcgtcatatcgggacccaggacggatgaacttgggagatcttct
tcgggatctgccttcagcccatacgccggatctacagcgtttacagccccttccccaggc
tataacagccacctccagtacggcacagacccgaccgctgccttcacttcctatgtgggc
tctccctatgatcattcgacgggcatggctggatctataggatatcacccgtacgccgct
cctttaggctcttacccctatggtgacccagcttaccgaaaaaatgccaccagagatgcc
actgccaccctgaaagcctggctcagcgaacacaggaagaacccttaccccaccaaaggc
gagaagatcatgctggccatcatcacgaaaatgacgctgacccaagtgtccacctggttt
gcgaacgccaggaggaggttgaagaaggaaaataaaatgacctggaccccgagaaatagg
agtgaagacgaggaagaagaagagaacatagatctggagaaaaacgacgaagatgagcca
cagaaacctttagaaaaggggaactcatcggaaccagagcctggaaatcagaaaacgagc
gtagttgaaattgcttgcgaaaggtttgaggaacaacattccaataaagacgaacaaatc
ctcagcgattcggaattcaaagactcggaggagaaagagatccttcactcccccaaagct
accacttcttccctggttgtgcctcacggaactgagatcttgcacgaaagccacgactcc
gatttggaaaatgtacatacaaatctagctcatactcttcccagtaacacagcgaactgc
agcgtgacttcagtcattcattcgcccccggcaacaacctccaaacccaaactctggtct
ctagcagaaatcgccacttcggacaagtcgaaagaacagagcgaacagccgagtacgtgc
ccgggccatggctgtgctgtgtccgccagcgcctcctcgccgtcccgttccccttgccct
tatcctaacagcgccgtgctgggtcggcctctctactacacctcgcccttctacacgggc
tacacgaactatggcactttcggacaccttcacagccaccatggaagtagcagcacaaat
cacttcagttctaatggattaagtcagactgtcttaagcagagcagaggcactagccaaa
ctctgcccagaatccaaaacaaagagcccggcaccagtagatcattgcaaggacacatcg
tcttatgagttgaagaaaggtgacgaatcgttattttaa
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