Hemitrygon akajei (red stingray): 140740640
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Entry
140740640 CDS
T11019
Symbol
irx3a
Name
(RefSeq) iroquois-class homeodomain protein IRX-3a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haka03000
]
140740640 (irx3a)
Transcription factors [BR:
haka03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
140740640 (irx3a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Dicty_REP
Motif
Other DBs
NCBI-GeneID:
140740640
NCBI-ProteinID:
XP_072926085
LinkDB
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Position
17:41950781..41954316
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AA seq
449 aa
AA seq
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MSFPQLGYQYIAATRPLYPDRQGISSSRTGSDLTASGAASTVLTMYGSPYAAQGYGAFLP
YAADLPMFPQLGAQYELKDSPSVQHPAFPHHHAAYYPYGQYQFGDPSRPKNATRESTSTL
KAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRNRTDEE
GNSYGSDPDLEGEKKEDDEEIDLENIDTENIESKEDEDEHDPDLSLDCKLDGRSDSEISD
AFDDLNGSEDGFLKSVVKDSRVTEEKRGDLSPEISGQSSGDQTKNNAEGKSPVSSPPENS
LSLNQKPKIWSLAETATTPDNPRKSPQIGSSPAGPPASSLLGQHRLFACPMGKFQNWTNR
TFSHHPLALINSNHFLGLSASQAAPAAGVPAFCTVRGEERAQTAEPTVTDRSSALEIEKK
IVKTAFQPVQRRPQKQLDAAMVLSALSSA
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccacaattgggatatcagtacatagctgcgactaggccactatacccagat
cgccagggtatatcgtcttccaggactgggagcgatctgacggcgtccggtgctgcttct
accgtactaaccatgtatggatccccttatgccgctcaaggatacggcgcctttttgcct
tatgcagccgatctccccatgtttcctcagctgggcgcccagtacgaactgaaggacagt
ccgagcgtacaacaccctgctttcccacaccaccacgccgcttactacccttatggccaa
taccagttcggggatccgtccaggccgaaaaacgccacaagggaaagtaccagcaccttg
aaagcttggctcaacgagcacagaaagaacccatacccgaccaaaggggagaaaattatg
ttggccataatcaccaaaatgaccctgacccaagtgtctacctggttcgctaatgctcgg
aggaggcttaaaaaggagaacaagatgacttggactcccagaaaccgaacggacgaagag
ggtaattcgtatggaagcgacccggacctggaaggggagaaaaaagaggacgacgaggag
atcgatttagagaatatcgatacggagaatatcgagagtaaagaggacgaagacgagcac
gacccggacttaagcctggactgcaaactggacgggagaagtgactctgagatctcagac
gcttttgatgacttgaatggttccgaggatggttttctgaaatcggtggtaaaagactcc
agagtgactgaggagaagcgaggcgacctttcgcctgagatttcaggacagtccagtggc
gaccagaccaaaaacaacgccgaggggaaaagccccgtctcctctccacccgagaacagc
ctgtcgctgaaccaaaagcctaagatctggtctttggctgaaaccgccaccactccggac
aatccccgcaagtccccacagataggcagctctcctgcggggcctccagcctcgtctctc
ctcggccagcacagactattcgcctgccccatgggcaagtttcagaactggacaaaccga
accttttctcatcatcccctggctttaatcaattcaaaccacttcctcggactcagtgct
agtcaagcagcccctgctgctggtgtccctgcattctgtactgtaagaggtgaagagcgg
gctcagacagcagaacccacagtaacagatcgaagcagtgccttggaaatagagaaaaaa
atagtaaagacagcttttcagccggttcagagacgaccccagaaacaactcgatgcagcc
atggttttgtcggcgctctcctccgcatag
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