Hemitrygon akajei (red stingray): 140740648
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Entry
140740648 CDS
T11019
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
haka03036
]
140740648 (chd9)
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
140740648 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
140740648
NCBI-ProteinID:
XP_072926107
LinkDB
All DBs
Position
17:complement(42829729..43098589)
Genome browser
AA seq
2982 aa
AA seq
DB search
MTDPIMDFLDDANLFGGGLDGLTDDGFSQPGPVSLVDELNLSADFEPLQVEPLHHVPETQ
TPDKINFEQLQTFDSLKLHHVNQPFNLVGSGNETSVLSPHSQYHCSPDHQNQTNGLFPSA
HSENSAQSFVDGSPMWGHQSPISNQNGSPFHSLQGHSQSMQQMTPFLTHHDFALPQSNQQ
QQQAESMQPQQTLNHFTTGQKTLSQGNQFMGVHGSPSSHMTRIGQPTTTVSSSTQHPAAV
QQFSQPAATVNPVHPIRFTSSASHGGVHHNVSYSSSSREMTTCSVNNSSQFTPQYSYPNN
NLANGNNLPSTTILSTHQPSQGMTCFPGSDAFTVPAGTNQEPVHHMLSPNSPAKQKILSP
MHSVNTQGNFSPSSMSSVQTDVPITTSSVSKMRISNASTQRKPTVISPLQGNPLPQCQTH
PLTRMDTEDVYQDQLLTSFGNSGLHQRDSPPVPRPTVPQQVQQHLNMQQDVVIQHQMHQE
TSAASHIPSQHWQPSITSQHQPAEGPVQLQPPSSQTTVDGSSPQAKQFVKLQNAQLMTGN
KQKNKDMQNKQEKANRIISEAIAKAKARGEQNIPRVVNPSCLSTGSARKEERKSGKGKAK
QKDKDSKNSRTGLCSKPKDIAKISKIIITLGKKKKRRNDLSAEELDSEHICTPSIKKRKN
DLSAEGSDTEQIPTPSIKKESITGCQKRRSNRQIKRKKYNEDIGMKVSDDDDGLAAKGKS
KSGVVLPAEQPVQLFVENPSEEDAAIVDKIMASRLVKKEVANGHMADVEEFFVKYKNYSY
LHCEWATEAQLMKDKRIHQKVKRFKVKQAQRGHFFAAMDDEPFNPDYVEVDRILEHSCCE
DKDTGEAVVYYLVKWCSLPYEDSTWELREDVDQAKIEEFERLQQAKPSLKRAERPPPTLW
KKLEKSREYKIGNELREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSITFLDEISLT
GLNGPFLIIAPLSTIANWEREFRTWTDLNVIVYHGSMISRQMIQQYEMYFRDSEGRILRG
TYRFNAMITTFEMILGGCPELNVIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLT
GTPLQNTVEELFSLLHFLEPQRFSSENTFMQEFGDLKSEAQVQKLQAILKPMMLRRLKED
VEKKLAPKEETIIEVELTNIQKKYYRAILERNFTFLSKGAGQANVPNLVNTMMELRKCCN
HPYLIKGAEEKILGEFREIHNPTVPHFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFS
QMVRCLDILEDYLIQKRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGI
NLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDKASLKLG
LDKAVLQSMNGRENTVGGMQQMSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILMR
RTKTITIESEGRGSTFAKASFVASGNRSDIALDDPNFWQKWAKKAEIDLEAIHGKNSLVI
DTPRVRKQTRPYNAAKDELAELSEAESDGEDRPKLRRPYDRSHAYGRTECFRIEKNLLIY
GWDRWKDILSHGRFKRRLVEQDVETICRALLVYCLAHYRGDEKIKSFIWDLITPTEDGQT
KELQNHLGLSAPVPRGRKGKKVKIQGSTFDMQKAEWLRKYNPEHLLQDEGYKKHLKHHCN
KVLLRVRMLYYLKQEVIGDQLEKVLDGVDASEIDIWVPEPEQSEIPAEWWDTDADKSLLI
GVFKHGYEKYNTMRNDPALCFLERVGKPDEKAIAAEQRGNDTFADGAEGYGHSQSTWDGE
DPEYKPTQPLFKDEMEDVASSPGDLMITDGSLGEGDLLYWPPASALTTRLRRLVTAYQRS
NKREQVKQEAQTKGDRRRRLCADTVKAKEAAKIEKQQRWTRREEADFYRVVSTFGVVYDP
DKQKFDWTKFRAIARLNKKTDESLQKYLYAFVAMCRRVCRLPPKEKEELLDPPIFIQPIT
EERASRTLYRIELLRKVREQVLRHPQLDERIKLCQPGPDLPEWWESGKHDKELLIGAAKH
GVSKTDYHIFCDSELSFMLAQRNSSQSKIAQSRSSTPLLHHQYPSSSSPLHLQPKVQDKK
SQPETESVKCERNAVVKKEPPDSSDEEVTMDVEFKSKVKSHFSLQVQNRLDKKTGIKLDP
DPDGCMVAARTQPLTPNSVLNKRKANRQRSDSSSDSESDSDNSSSSSPSSSSSSSSSQSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSDDSDSDSDDKQTPAGSKAPQHLKPYDEDSV
ASLSIAHDETQDSFLPDSGKPDTQFLQERHRFAASCWPKDRVMINRIDSICHAVLKGNWI
PSRRSYDYNAVTSSYTTKLLDSPSAMGDFSDSAVVTSGSQGVKEDNSLLSQFTKVKKHVR
EKEFTVKINDESGLKLTFQKQRLTQKRALETEEGTSDQHQYMAQLHDLYSTPDSSQELAM
DFSKSLMGAGSSIPLSSSMLFNTNLPGSISTAIPHPKPALAGASQQITGHCTNGILLDAQ
PIVKKRRGRKKNVEGLDNLFMNRNKSLQPANAEFINTQSAFNACHGQLHAESRVSVINVK
DGTRLTGEDAPKRKELEEWLKEHPDYVTDVSAHIPKINKPEIVSERPKQKRHRCRNPDKI
DVKSLTGEERVPVINRRNAKKMGGSLAPPIKDLARWLQENPDFGIAPEWTNVVKQSGFLP
ANMFDRILTGPVVREEVSRRGRRPKSELTKAAAAAAAAMTVNPLISNGLLAGMDLNSLQS
LQQNLQSLQSFQLTAGLMGFPPGLPSAGGETKSLASVFPMMLSNMAGFGMGGLLNKPSEA
APEDKKGSSTMDSPRPTDGTNERTEKLNLDVCSELSVSNSATSSPKKLTPTTSASASATA
SNPLAINPLLLSSMLYPGILLSPGLNIPIPGFPQTNMFDVQTNKNSEIAMSKPTRETVEH
QEGAEHNSSHENSGDDVSEKAASSSTSDNATQPDDSGSSEED
NT seq
8949 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccccatcatggacttcttggatgatgccaatttgtttggtggaggactggac
ggattgacagacgatggattttcacaacctggaccagtttcgttggttgatgaactaaac
ctaagtgcagattttgaacctttgcaagttgagccattgcatcatgtaccagagacacag
acaccagacaaaattaactttgaacaattacagacatttgattcattaaaacttcatcac
gtgaaccagccatttaatctggtgggtagcggtaatgagactagtgtattgtctccacat
tcccaatatcattgttcacccgatcatcaaaatcagacaaatgggctctttccttctgcc
catagtgagaatagtgcacagtcgtttgtcgatggaagtccaatgtggggtcaccaaagc
cctatttcaaatcaaaatggatcgccattccatagcttgcaaggacattcacagtccatg
cagcagatgacgccgtttttaacgcaccatgattttgctttgcctcagtcgaaccaacag
cagcagcaagctgagtcgatgcagccccagcagactcttaaccatttcactacaggacag
aaaactctaagtcaaggcaatcagttcatgggggtccatgggtcgccttcatctcacatg
actcgcattggtcaaccaactactacagttagctcatccactcagcaccctgccgcagtg
cagcagttcagccagccggccgccactgtgaatcccgtacatcctattcgattcaccagt
agtgccagccatggcggtgtacatcacaacgtcagctactcaagctcttcacgagaaatg
actacttgttctgtcaacaactcaagccagtttacccctcagtattcctatcctaataac
aacctggctaatggcaacaacttgccatctactacaatactttcaactcatcaaccatcg
cagggcatgacatgcttcccagggagtgatgcgttcacagtgccagcagggaccaaccaa
gaaccagtacatcatatgctcagtcccaacagtcctgctaaacaaaagattttatcgcct
atgcattctgtaaacactcagggaaatttcagtccttcaagtatgtcctctgttcaaact
gatgtgccaataacaaccagctcagtgtctaaaatgagaatttctaatgcatcaactcaa
aggaaaccaacggtcatttcaccgttacagggaaatccacttccacagtgtcagacgcat
cccttgactaggatggatactgaggatgtttatcaggaccagctgttgacgtcttttggg
aactccggtctgcaccagagagattcacctcctgttccaaggccaaccgttccccaacag
gtacagcaacatctaaacatgcaacaggacgtggttatccagcatcaaatgcatcaagaa
acatctgccgccagtcacatcccttctcaacactggcaaccttcgataaccagccagcat
cagccggcagaaggacctgtacagctgcagccaccttcctcccagaccactgttgatggt
tctagtccacaagcaaagcagtttgtcaaactacagaatgcacagctgatgacgggaaac
aagcagaaaaataaggacatgcagaataagcaagagaaggccaatcggatcatatcagaa
gcaatcgccaaagcaaaggcccgtggggagcagaatattcccagagtcgtaaacccatcc
tgtttgtccactgggtctgctcgaaaggaagaaaggaagtcaggcaaaggcaaagcaaag
caaaaggataaagattcaaagaattctagaactggtttatgttccaagccaaaagacatt
gcaaaaataagcaaaatcataatcacattgggcaagaaaaagaaaaggaggaatgatttg
tcggcagaggagttggactctgagcatatctgcacaccatcaataaagaaaagaaagaat
gatttatcagcagaaggatctgatactgaacagattcccactccatcaataaagaaagaa
tccatcactggatgtcagaaaagacgatcaaacagacaaataaaaagaaagaaatataat
gaagacattgggatgaaggtttctgatgatgatgatggccttgctgctaaaggaaaaagc
aagtctggtgtagttctacctgctgaacaacctgtgcagttatttgtggaaaacccaagt
gaagaagatgctgcaattgtggataaaattatggcttcaagactagtgaaaaaagaggtg
gccaatggacatatggctgatgttgaagaattttttgttaagtacaaaaactactcctat
ttgcattgtgaatgggccacagaagcacagctgatgaaagacaaaagaatacatcagaaa
gtaaaacggtttaaggttaagcaagcacagagaggccatttcttcgcagcgatggatgat
gagccattcaatccagactacgttgaagtggatcgaatattggagcactcatgttgtgaa
gacaaggacactggcgaggccgtagtttactacttggttaagtggtgctcactgccatat
gaggatagtacctgggagcttcgagaagacgtagatcaagcaaagattgaggagtttgaa
cggctgcaacaagcaaagccttcgctgaagcgtgcggagcgacctcctcccactctttgg
aagaagcttgaaaaatccagggaatacaagattggtaatgagctcagggagtaccagttg
gaaggagttaattggctcttgttcaactggtataacaggcaaaactgcattcttgctgat
gaaatgggtttaggcaagactatccaatctattacattccttgatgaaatctctctgacg
ggcttgaatggtcctttccttatcattgcgcctttgtctacaattgcaaactgggaaaga
gaatttcgcacatggacagacctgaacgtcattgtttatcatggcagtatgatcagtaga
caaatgattcagcagtatgaaatgtacttccgggactcagagggccggatccttcggggt
acttacagatttaacgccatgataactacttttgagatgatcctgggtggctgtccggag
ctgaacgtaattgagtggcgttgtgtgatcattgatgaagctcacagactgaaaaataaa
aactgcaaactactggaaggactgaaactcatgaatctggaacataaggtgcttctgaca
ggaaccccattacagaacacagtggaggaactattcagcttgcttcacttcctggagcct
caacgtttctcatcagaaaacacattcatgcaggaatttggagatctaaagagtgaagca
caggtgcaaaagcttcaggcaatattaaagcccatgatgctgcggcgtttaaaggaggat
gtggagaagaagctggctcctaaagaggagactatcattgaagtagaactaactaatatt
caaaagaaatattatcgtgcaatcctggaaagaaactttacttttctatccaaaggagct
ggacaggcaaatgtgccaaatctcgtaaacacaatgatggagctcagaaagtgctgtaat
cacccctaccttataaaaggtgctgaagaaaagatacttggagagttcagagagatccat
aatccaactgttccacattttcatctacaagcaatgatccagtcagctggtaaactggtc
ttaatagacaagctgcttccaaagatgaaagcagggggtcacaaagttcttatcttctct
cagatggtgcggtgcttagatatacttgaggactatcttattcaaaagaggtacccatat
gagcgcattgacgggagagttcggggaaacctgcgacaagcagcaattgaccgatttagc
aagcctgactctgatcgttttgtgttcttactgtgcacgagagctggaggtttaggaata
aatctcactgcagcagacacgtgtatcatttttgattcagactggaatcctcagaatgat
cttcaggctcaagctcgttgtcaccggattggtcagaacaaagctgtgaaggtttatagg
ctgataactcgaaactcttatgaacgggaaatgtttgacaaggccagcctgaagctgggt
cttgacaaagctgtgctgcagagtatgaatggtcgagagaataccgttggtgggatgcaa
cagatgtccaagaaagaaattgaagacttgcttcgtaggggtgcttatggtgcaattatg
gatgaagaagatgaaggttctaagttttgcgaggaggacattgatcagattcttatgcga
cgtacaaaaacaattactattgaatctgaagggagaggctcaacgtttgccaaggcaagt
tttgttgcatctggtaacagaagtgatattgctttggatgatccgaacttttggcagaaa
tgggcaaagaaggcagaaattgatcttgaagctatacatggaaagaacagtttagtaatt
gatactccaagagtaaggaaacagaccagaccttacaatgctgctaaagatgaactggca
gaattatcagaggcagaaagtgatggtgaagatcgacccaaactacgtaggccctatgac
cgatctcatgcctatggaagaacagagtgcttcaggattgagaagaacctgctaatttat
ggatgggaccgctggaaagacatcttatcacatgggcggttcaagagacggctggtggaa
caggatgtggagacaatttgtcgagcactcttagtgtactgtcttgctcattacagagga
gatgaaaaaataaagagttttatctgggatctcattaccccgacggaggatgggcaaaca
aaagaactacaaaaccacttgggcttatctgcaccagttccgagagggcggaaagggaag
aaggtaaagatccagggaagcacatttgatatgcagaaggctgagtggctcaggaagtat
aatccagaacatctgctacaagatgaaggctacaaaaaacacttaaaacatcactgcaat
aaagtgcttctacgagtaagaatgttgtattatctgaaacaagaagtaattggtgaccaa
ttggaaaaggtgcttgatggagtggatgcaagtgagattgatatctgggttcctgagcct
gagcagtctgagattcctgccgaatggtgggacacagatgctgacaaatctctgctcatt
ggagtcttcaaacacggctatgagaaatataacacaatgagaaatgacccagcactctgt
ttcttggagagagtcggcaaacccgacgagaaggcaattgcagcagaacagaggggaaat
gacacctttgctgatggtgcagaggggtatggtcactctcaatcaacatgggatggtgaa
gatccagaatataaaccaactcaacccctattcaaggatgaaatggaggatgttgcatct
tctccaggcgatctgatgattacagatggttctttgggagaaggcgatctgctgtattgg
ccaccagcatctgctttaacaacccgactgcgtcgacttgtaactgcttatcaacggagt
aacaagagagaacaggtcaaacaggaagcccaaacaaaaggggacaggagacgaagacta
tgtgcagacaccgtaaaagctaaggaggctgctaaaattgagaaacagcaaaggtggacg
aggcgagaagaggctgatttttacagagtcgtgtctacttttggtgttgtttatgatcca
gacaagcaaaaatttgattggaccaaattccgagctatagccagattgaataagaagaca
gatgagagtttgcagaaatatctttatgctttcgttgccatgtgtcgaagagtttgtcgt
cttccccctaaagagaaagaagaacttctcgatccacccattttcatacaacctatcaca
gaagagcgagcttccaggacactgtatcggattgagctgctccgaaaagtgcgggaacaa
gttcttcgccacccacaacttgacgagcggataaaactctgccagccgggcccagaccta
cctgagtggtgggagagtggaaaacatgataaggaattactcattggagcagccaagcat
ggtgtcagcaagactgattaccatattttctgcgattctgagctatccttcatgttagcc
cagaggaacagtagccagagcaaaatagcccagtcgagaagttcaacgccactcttacat
catcagtacccatcttcttcttcgcctctgcatttgcagcccaaggtgcaagataaaaaa
agtcagcctgagactgaaagtgtaaaatgtgaaaggaatgctgttgtcaagaaggaacca
ccagattcgtctgatgaagaagttacaatggacgttgaatttaagagtaaagtgaaatcg
catttcagcttgcaggtgcagaacaggttagacaagaaaactggtattaagttggaccct
gatcctgatgggtgcatggttgcagcaagaactcagcccctaacaccaaactcagtgctc
aacaaacgaaaagcaaaccgacaacgctcggactcgagctctgactcagagtcggactct
gacaattcttcgtcatcgtcaccttcgtcatcctcctcgtcatcctcgtcccagtcttca
tcttcctcctcatcctcgtcgtcctcctcctcctcctcctcgtcctcatcatcctcgtcc
tcctcctcctcctcctcctcatcctcttctgatgatagcgatagtgacagcgatgataag
cagaccccagcaggtagtaaagcaccacagcacttgaagccctatgatgaagatagtgta
gcatctctcagtattgcacatgatgaaacacaggacagctttctaccagacagtggaaag
cctgatacccagttcctgcaagaaaggcataggtttgctgcctcctgctggccaaaggat
cgtgtaatgatcaacagaattgacagcatatgccatgcagtgttgaaaggaaattggatt
ccatcaagaagaagttatgattacaatgctgtgacatcttcctatacaacaaaattactt
gatagcccttctgccatgggagatttcagcgattctgctgttgttacatcaggaagccaa
ggcgttaaagaagataattctcttttgtcgcagttcacaaaggtgaagaagcatgtgcga
gaaaaggagtttacagtgaaaatcaatgacgaaagtggattgaagttaacttttcagaag
caaagactcactcagaagagagctctagagactgaagaaggaacttcagatcagcatcag
tatatggcacagctgcacgatttatattctactcccgacagcagtcaagaattggctatg
gacttctcaaaatctttaatgggagctgggagctccattcccttatcatcctcaatgcta
ttcaataccaatttacctggcagcatctccacagccatccctcatcctaaaccagcatta
gcaggtgcttctcagcagattacaggacactgcacaaatggaatccttttggatgcccag
ccaattgttaaaaagagaagaggaaggaaaaagaatgtggaaggattggacaatcttttc
atgaaccggaacaaatcattacagcctgctaatgctgaatttatcaacacacaatcagca
tttaatgcatgtcatgggcagcttcatgctgaaagtcgtgtctcagtaattaatgtgaaa
gatggcaccagactcacaggggaagatgctccaaaaaggaaggaattggaagagtggctc
aaggaacacccagactatgtgacagatgtgtcagcccacattccaaaaatcaacaaacct
gagattgtaagtgagcgaccaaagcaaaaaagacatcggtgcaggaaccccgacaaaata
gatgtcaaaagtttaactggagaagaacgtgtgcctgttataaatcgaagaaatgcaaag
aagatgggtggctcactagctcctccaattaaggacctggcaaggtggttacaggaaaat
ccagattttggaattgctccagaatggacgaatgtggtaaagcagtcaggatttttacca
gcaaatatgtttgatcgcatccttactggacctgttgtccgagaggaggtgagtcgaaga
ggcagacgtccaaaaagtgagctcaccaaagctgcggctgcagctgctgctgcaatgaca
gtcaaccctttgatctccaatggacttcttgctggaatggacttaaacagcctccaaagc
ttgcagcagaatctccagagcttacaatctttccaactgacagcgggattaatgggattc
ccaccaggcctgccctctgcaggaggagaaactaaatcactggcttcagtgttccctatg
atgctttctaacatggcagggtttggaatgggagggttgttaaacaaaccctcggaagct
gctccagaggacaagaagggaagtagcaccatggactcccctagaccaacagatgggaca
aatgaaaggacagagaaactaaatctggatgtatgtagtgaactatctgtgtcaaattct
gctacgtcctctcctaagaagctgacaccaaccacaagtgcttctgcctcagcaacagcc
agcaatcctttggctattaatccactgttgttgtcgagcatgctttatccgggcattcta
ctctctccaggccttaacataccaatcccaggattcccacagaccaatatgtttgatgtg
cagactaataaaaattcagaaatagccatgtccaaacctacaagagaaactgtagagcat
caagagggagcagaacacaattcttcacatgaaaacagtggagatgatgtatctgaaaaa
gcagcatcttcatctaccagtgacaatgcaactcagccagatgattcagggtccagtgaa
gaagactga
DBGET
integrated database retrieval system
