Hemitrygon akajei (red stingray): 140740681
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Entry
140740681 CDS
T11019
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
140740681 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
haka04131
]
140740681 (vps35)
Membrane trafficking [BR:
haka04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
140740681 (vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
140740681
NCBI-ProteinID:
XP_072926187
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Position
17:49611572..49653311
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AA seq
796 aa
AA seq
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MPTTQQSPQDEQEKLLDEAVQTVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYIK
SFSQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEETEEVVTGDINDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLTGILEQVVNCRDGLAQEYLMECIIQVFPDEFHLQTLNPFLRSCAELHQSVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPERVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPIDTYNNILTVLKLKH
FHPLFEYFDYESRKNMSCYILSNALEYNTEIVGQEQVDAILNLVSTLIQDQPDQPAEDPD
PEDFAEEQSLVGRFIHLFQSDDPDQQYLILNSARKHFGAGGNQRIRFTLPPLVFAAYQLA
FCYKENSKVDEKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGDIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQCRAVSICAHLFWSGRNTDKNGEEIHDGKRVMECLKKALKIANQCMDPSLQVQLF
TEILNRYIYFYEKENEAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLR
RESPEADGPIYEGLVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaactcagcagtcacctcaagatgagcaggaaaagttgctcgatgaagctgtt
cagactgttaaggttcagtcttttcaaatgaaaagatgcttggacaagaataaattgatg
gatgcattaaaacatgcttcaaatatgctaggtgaactgcgaacttccatgttgtcacca
aagagttattatgaactctacatggcaatttcggatgaattgcattatttggaagtttat
ctgactgatgaatttgccaaagggagaaaggtggctgacctgtatgaacttgttcagtac
gctggcaatattattcctaggctctatttactcatcactgttggagttgtctacatcaag
tcattttcacagtctaggaaggatattcttaaggatctggtagaaatgtgccgtggagta
cagcatcccttacgaggactgttcttgaggaactatttgcttcaatgtaccagaaatatt
ttgcccgatgaaggggaagagacagaagaagttgtaactggagacatcaatgattctatg
gactttgtgctactgaactttgcagaaatgaacaaactctgggtccgaatgcagcaccag
ggtcatagcagagaccgagaaaaacgggaacgtgagcgtcaagaactaagaattcttgtt
ggtacaaatctagtccgacttagccagctagaaggggttaacgtggagcgctacaaacag
attgtgttaactggaattttagagcaggttgtaaactgcagggatggtttggctcaggaa
tatctcatggaatgtattattcaggtattccctgatgagtttcatttgcagacactgaat
ccattccttcgttcttgtgcagagctccaccaaagtgttaatgttaaaaacattatcatt
gcattaattgacaggttggcattgtttgcgcatcgtgaagatggtcctggaatccctgct
gatataaagttgtttgatatattttctcaacaagtagctacagtaatccagtcaagacag
gatatgccttctgaagatgtggtatctttacaagtgtctcttatcaacttggccatgaag
tgttatcctgaacgggtggactatgttgataaggttcttgaaactactgtggagattttc
aacaaacttaatcttgaacatattgctactagcagtgcagtttctaaagagttaacacga
cttctaaagattcccatcgacacctacaacaatatacttactgtcctgaagttgaagcac
ttccatcctttgtttgaatactttgactatgaatcacgcaaaaatatgagctgttacata
ttgagcaatgctcttgagtataatacagaaatagttggtcaggaacaggtggatgccatt
ctgaacttggtgtcgacattgattcaagatcagcccgatcagccagcagaagatcctgac
ccagaagattttgctgaggaacaaagccttgttggtagattcatccatttatttcaatct
gatgatcctgatcaacagtatctgattttaaacagtgctagaaaacactttggtgctggt
ggaaatcaacgtattcgctttactttaccaccattggtttttgctgcttatcagttggca
ttctgctataaggagaattcaaaagtggatgaaaaatgggaaaagaagtgccagaagata
ttttcttttgcccatcagaccatcagtgccctgatcaaagcagagcttgctgaattaccc
cttcgcctatttctgcaaggagcacttgcagctggagatattggatttgagaatcatgaa
actgtggcttacgagtttatgtcacaggcattctccttgtatgaagatgaaatcagtgat
tctaaggcacagctggcagcaatcacattaataattggaacatttgagagaatgaaatgt
tttagtgaagagaaccatgaacctttgaggacacaatgtgcgctggctgcttcaaagttg
ctaaaaaagccggatcagtgtcgtgctgtcagtatctgtgctcatttattttggtctgga
cgaaatacagataagaatggcgaagagatccatgatggcaagagagtaatggagtgcctt
aagaaggccttgaagatagctaatcagtgcatggatccctcattacaagtacagctattc
actgaaatccttaatcgatatatatatttttatgagaaagaaaatgaggcggtgacaatt
caagtcttaaatcagcttattcaaaaaataagagaagatcttccgaacttagaatccagt
gaagaaactgagcaaattaacaaacactttcacaacacactggagcacctgcgtctgcgg
agagaatcacctgaagctgatggaccaatttatgagggtcttgtgttgtaa
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