Hemitrygon akajei (red stingray): 140741028
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Entry
140741028 CDS
T11019
Name
(RefSeq) integrin alpha-8-like
KO
K06584
integrin alpha 8
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04510
Focal adhesion
haka04512
ECM-receptor interaction
haka04514
Cell adhesion molecules
haka04810
Regulation of actin cytoskeleton
haka04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
140741028
04514 Cell adhesion molecules
140741028
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
140741028
09142 Cell motility
04820 Cytoskeleton in muscle cells
140741028
04810 Regulation of actin cytoskeleton
140741028
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
haka04515
]
140741028
Cell adhesion molecules [BR:
haka04515
]
Integrins
Integrin alpha subunits
140741028
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Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
140741028
NCBI-ProteinID:
XP_072926761
LinkDB
All DBs
Position
18:3034340..3191384
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AA seq
1047 aa
AA seq
DB search
MQLCPSAVVALHSWHLMGTLVFFSCLLSQLCAFNLDAENPVIYTGPKGSNFGFSVEFYMP
EAGTRGVLIGAPKANTTQEKVTEGGAVFHCPWSSNGSLCTLIPFDNKGDRYINRTYEILM
ENKSNQWFGATVKAHKDKIVACAPMYRWKYVKSTYTGYLTSGSTPVGSCLVASKNFSTYA
EYSPCRSNLLEVHIKNGPDQRFCEAGWSSELTKGGKLLLGAPGSFFWQGQLIAAKVDDIL
KNYNYNDPLKILGMKKQTGDAQGKRDNIFMGYSLALGEFTGDSINEYLVGAPRDKDTLGS
VTILWSNMTAIKSIIGEQVAAYFGYTVTVLDINSDGRDDILVGAPLFMNRGQDGKLHELG
RMYVYLQEEPGVFVEPPQTLTGTDKYGRFGSAITSLGDLDYDGYKDVAVGAPFAGEDGKG
RVFVYLGHATGLYQKPFQELKGSWTPDVISAGFGFALKGGSDIDENHFPDLIVGAHDADN
VLVYRAKPVVAANVKLTLEPDILNPEFKTCLNTKSGTSIPVTCFKVQMCAEVQGHDIVQH
YVLNAQVELDKNKHRSQRRTFFLHSHQTEEQFQFPPIKNKEQFCKNFTAYLKDEAEFKDK
LSLIVVTMNCSLAEVPLSSSGTLPMVLSPHSKVLVTEKARILLHCGDDHICIPNLKLSAK
VDEDHIFAGESSLLTVFFNAVNLGEGAYETELHIPLPPQVDFTSVVQGNKGLTKLSCNPV
MSNGSQAVSCDLGNPMENGTKISAGLHFMVHSLEQVETITISMQIKSKNTQNSDSEVVQL
KLQVKAVAQLVLRGVSQPNKVFLPFISLESPSDTVMENNTLQVIAHTYELHNNGPSTISK
ALIELNWPADFNGDDLLFTSKFEPWGEIKCTVNSSNADKWVQPLSTVKPHITNIRREMNK
RDVSKPEILMEETIFNLTCDTITCVKLLCEVGRLERQKAASISIQSSLRVEPFIKKLYKQ
YIFQSKASFIVQEMPYKVRPDEFPRGNIVVETVIESREDEGTGNVPVWCIIVAVIGGLLL
VGLVTFILWKCGFFKRKLPPTENEELL
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgcagctctgtcccagtgcagttgtggccctgcattcttggcatttaatgggaactctg
gtatttttttcatgtctactttcacaactttgtgcattcaatctcgacgctgagaatcca
gtcatttacacaggacctaaaggaagtaattttggattttctgttgagttctacatgcct
gaggctggcactcgaggtgtccttatcggtgctccaaaggcaaatacaacccaagaaaag
gttacagaaggcggagcagtgtttcattgcccttggtcgtctaatggaagtctatgtaca
ttaataccatttgataacaaaggtgaccgatacattaatcgcacatatgagattctgatg
gaaaataaatccaaccaatggtttggagcaacggtcaaagcacacaaggacaaaattgtg
gcctgtgcgccaatgtatcgctggaagtatgtgaaatcaacctacacagggtacctcact
agtgggagtacaccagtgggctcatgcctggtagcatccaagaatttcagcacctatgca
gaatattctccctgccgctccaatcttttggaagtacacataaaaaatggtcctgatcaa
cgtttttgtgaagcaggatggagcagtgagctcacaaagggaggaaaactgctcttggga
gcacccggcagcttcttttggcaaggtcaattgatcgctgccaaggttgatgatattctc
aaaaattataactacaatgatcctctaaaaatattgggaatgaagaaacaaactggagat
gcacaagggaaaagagataacatctttatgggatactcgcttgccttgggggagttcaca
ggagactctataaatgaatatctcgtgggagctcccagagacaaagacactttgggttct
gtgactatcttgtggtctaatatgacagccataaaaagcattattggtgagcaggtggca
gcgtattttggttatacagtgaccgtcttggatataaacagtgatgggagagatgatatt
ttagttggagctccactgtttatgaaccgaggacaggatggcaaactgcacgagcttggg
cggatgtacgtttatttacaggaggaacctggagtcttcgtagaaccaccacagacctta
acagggacagacaaatatggcagatttggaagtgccatcacctcccttggggacctggat
tatgatggatacaaggatgtagcagttggagccccatttgctggtgaagatggtaaagga
agggtgtttgtttacctgggacatgcgactggcctctaccaaaagccttttcaagaactg
aagggaagttggactcctgatgtgatatcagcaggatttggctttgcattgaaaggaggt
tcggatattgatgaaaatcatttcccagatttgattgttggtgctcatgatgccgataat
gttctggtgtacagggcaaaaccagttgtagcagccaatgttaaactcacacttgaacca
gatattctgaatccagaattcaagacatgcttgaacacaaagtctggaacttctatccct
gtgacatgttttaaggtgcagatgtgtgcagaagtgcaaggccatgatattgttcagcat
tacgttctgaatgctcaggttgagctggacaaaaacaagcataggtctcaaagacgaaca
ttctttctgcattcacaccaaacagaagaacaatttcagtttccgccaataaaaaacaag
gaacaattctgcaaaaatttcactgcttacctcaaggatgaagcagagtttaaagacaag
ctgagcctgattgttgtgacgatgaactgcagtctagcggaggtgccactgagcagctct
ggcaccctgcccatggtgttgagtcctcacagtaaggtcctggtcacagagaaggcgcgt
attctcctgcactgtggcgatgatcacatctgcatcccaaatctcaaactgtcagcaaaa
gtagatgaagaccatatctttgctggggaatccagccttctgactgtctttttcaatgct
gtcaatcttggagaaggagcatatgaaactgaactgcatatccccctccctcctcaagtt
gacttcacaagtgttgtgcaaggtaataagggccttaccaaattgagctgtaacccagtg
atgagcaacggcagtcaagcagtgagctgtgaccttgggaatccaatggaaaatggcacc
aagatatctgcaggactccatttcatggtgcacagcttggagcaggtggaaaccatcaca
atcagcatgcagataaaaagtaaaaacactcaaaactctgatagtgaggtggtccagttg
aagttgcaagtgaaagctgtggctcagcttgttctcaggggggtttctcagcccaacaag
gtattcctcccatttatcagtttggaatcgccttcagatacggtgatggagaacaacact
ctacaggtgatagcacacacttatgagctgcataacaatggcccatcaacaattagtaaa
gccctgattgaactcaactggcctgcagatttcaatggtgatgatctcctgttcacatct
aagtttgaaccatggggtgaaatcaagtgcactgtaaactcctccaatgctgacaaatgg
gtacagcctttaagtacagtgaagcctcacattactaacattcgtcgtgagatgaataaa
agagatgtcagcaagcctgaaatattaatggaggagaccatcttcaatctgacctgtgac
acgatcacctgtgtgaaacttttgtgcgaagtgggtcgcctggagagacaaaaggcagcc
tcgataagcatacaatcctctctcagagtagagcccttcattaagaagctttacaaacag
tatattttccagtccaaagcatctttcattgtgcaagaaatgccatacaaagtacgtcct
gatgaattccccagaggcaatattgtggtggaaactgtaattgaatcgagagaagatgag
ggtactgggaatgtaccggtctggtgtattattgttgcagtgattggtggcctgctgctt
gtaggtctggtgacattcatcctttggaagtgtggatttttcaaaaggaaactgccacca
accgaaaatgaggaactcctgtga
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