Hemitrygon akajei (red stingray): 140741460
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Entry
140741460 CDS
T11019
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140741460 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haka03021
]
140741460 (smarcd2)
03036 Chromosome and associated proteins [BR:
haka03036
]
140741460 (smarcd2)
Transcription machinery [BR:
haka03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
140741460 (smarcd2)
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
140741460 (smarcd2)
PBAF complex
140741460 (smarcd2)
GBAF(ncBAF) complex
140741460 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
140741460
NCBI-ProteinID:
XP_072927781
LinkDB
All DBs
Position
18:complement(53294913..53351915)
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AA seq
504 aa
AA seq
DB search
MATRVGGGYPMNPESPMNPALGVNPMNSVAGQGGRMPLNLQQPSPAFRTMGPGGAYPRPG
MPLGSRMGMPGMQMGMPSGPSFMGNTAVRPGIPQPMMDPFRKRMLAQQPPQMMQNRGRGV
KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLEIQESMKKPLMQKRKLR
IYISNTFTPAKSEGEEGETVASWELRVEGKLLDDPGKVKRKFSSFFKSLVIELDKDLYGP
DNHLVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDVRLARLLGVHTQT
RANIMQALWLYIKKNRLQDNHEKEYINCNRYFKQIFNCMRMKFTEIPIKLAGLLQHPDPI
IINHMISVDPSDQKKTACYDIDVEVDDPLKSQMSNFLLSTTNQQEIAVLDVKIHDTIESI
NQLKIQRDFMLSFSNHPQEFIQDWLKSQCRDYKIMTDIIGNPEEERRAEFYYQPWTQEGV
GRFIFSKVQQRRQELEQVLGIRFT
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaagagtaggcggaggataccccatgaacccagagagccccatgaatccagct
ctcggggtgaacccaatgaattccgtggcgggccaaggtggtaggatgccacttaatctt
cagcagccatctccagccttccgcacgatgggtcccggcggcgcttatccccgcccaggg
atgccactaggatctcgcatgggaatgccaggaatgcagatgggcatgccctctggccca
tccttcatggggaacacggccgtgcgaccaggaattccgcagccgatgatggacccattt
cgtaagcgtatgctcgcacagcagcctccacagatgatgcagaaccgagggagaggtgtg
aagagacgaaagatggctgacaaaattctaccacaaaggatcagagagcttgttcctgaa
tcccaagcttatatggatctcttagcttttgagcgcaaattggatcaaactattatgagg
aaacgcctggagattcaggagtccatgaaaaagcccttaatgcaaaagcgcaaactaagg
atctacatctcgaacacttttaccccggccaagtctgaaggtgaagagggagaaacagtt
gcatcatgggagcttcgtgtggaaggaaagctacttgatgatcctggaaaagtgaagaga
aagttttcatcctttttcaagagtttagtcatcgaattggacaaagacctttatggtcca
gacaatcacttggtggagtggcacagaatgcccaccacacaggagacagatggctttcag
gtgaagagaccaggagatgtgaatgtgaagtgcaccctgctattgatgctggatcaccag
cccccacagtataagctcgatgtcagattggctcgtttgttgggggtccacactcagacc
cgtgccaacatcatgcaggccctgtggctctacatcaagaagaacaggcttcaggataac
cacgaaaaggaatacatcaattgcaaccgctacttcaagcagatatttaactgcatgcgg
atgaaattcactgaaattccaataaaactggctggtctcctacagcatccagaccccatc
attatcaaccacatgattagtgtggatccaagtgatcagaagaaaactgcttgttatgac
attgatgttgaggttgatgaccctctgaagagtcaaatgagcaacttccttctgtcgaca
accaatcagcaggagattgcagtcttggatgttaagattcatgacacaattgaatctatc
aatcagttgaagatccaacgtgacttcatgctaagcttcagtaaccaccctcaggagttt
attcaagactggttaaagtcacagtgtcgtgattacaagattatgactgatatcattggg
aacccagaggaggagagaagggctgagttttactatcaaccttggacacaggaaggagtt
ggaagattcatcttctcaaaggttcagcagcgcagacaagaactggaacaagtactggga
atacgttttacttag
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integrated database retrieval system
