Hemitrygon akajei (red stingray): 140741813
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Entry
140741813 CDS
T11019
Symbol
smarca2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140741813 (smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haka03021
]
140741813 (smarca2)
03036 Chromosome and associated proteins [BR:
haka03036
]
140741813 (smarca2)
Transcription machinery [BR:
haka03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
140741813 (smarca2)
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
140741813 (smarca2)
Chromatin remodeling factors
BAF complex
140741813 (smarca2)
PBAF complex
140741813 (smarca2)
GBAF(ncBAF) complex
140741813 (smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
SnAC
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
140741813
NCBI-ProteinID:
XP_072928331
LinkDB
All DBs
Position
2:53494545..53616857
Genome browser
AA seq
1581 aa
AA seq
DB search
MSTPTDPTGGMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPGPSPGPSNVTHSM
PSQAPGEFQQDSMHQMHKSMEAIHDKSMADEMHYSQMKSMGMRPSHTGMGPPQSPMDQHS
QGYMSPHPSPMSAPEHIPSPMSAGGPTPPQIPPSQATSILQGDPQVMSQQNRGPSPFNPI
QLHQLRAQILAYKMLARGQPLPDNLQLAVQGKRSLPSMQQQVAPIAYNRPPSIGMHSMAG
QAVGPSQMMPGHMPNVHKPWTEGQVNEMGIPNASQKIPTQATCGRPSPAPAVQTTPSGPG
ASLPQQSVVQPSPTIQLHQKQNRITPIQKPQGLDPVEILQEREYRLQARIAHRIQELENL
PGSLPPDLRNKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNVKAYKRSKRQSLR
EARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLSRAIGTWH
ANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVASLTKLV
YEHKAAQAAKEKKKKKKKKKTEEPAEGMSSSLAPDGELLDESSQMSDLPVKVIHVETGKV
LQGPEAPKAVQLDAWLEMNPGYEVAPRSDSEEESGSEYEEEEEDEETPVAPDTEEKKIIV
SNIEDVSDIFAKQIIECAKQDVDDEYSMRAGMKGSQSYYAVAHAVTERVEKQSTLLINGT
LKQYQLQGLEWLVSLYNNNLNGILADEMGLGKTIQTIGLITYLMEHKRLNGPYLIIVPLS
TLSNWVYEFDKWAPSVVKISYKGTPALRRSFIPQLRSGKFNVLLTTYEYIIKDKHVLAKL
RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRVLLTGTPLQNKLPELWALLNFLLPTIF
KSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVE
YVIKCDMSSLQKVLYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPFMFQ
HIEESFAEHLGYNGGLITGPDLYRASGKFELLDRILPKLRVTNHRVLLFCQMTSLMTIME
DYFAFRNFLYLRLDGTTKAEDRGALLKMFNEENSKYFIFLLSTRAGGLGLNLQAADTVII
FDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGM
FDQKSSSHERRAFLQALLEHEEQNEGDTNASPSCSTAWEEDEVPDDETLNQMIARNEEEF
ELFMRMDLERRREDARNPKRKPRLMEEDDLPSWIVKDDAEVERLTCEEEEEKMFGRGSRM
RRDVDYSDALTEKQWLRAIEDGNLEEMEEEIRQKKARKRRRNVDKDSSKEDGKKKKKRGR
PPAEKLSPNPPRITKQMNAIIDTVINYRDSLNRQLSEVFIQLPSRKELPEYYELIRKPVD
FKKIKDRIRNHKYRSLGDLEKDVTLLCHNAQTYNLEGSQIYEDSIVLQSVFKSARQKIAK
EEESEEESNDDEDEEEESGSETKSVKVKIKLGRKDSDKSREKGKSRKRLVRTKIKPVISD
DDSDDDQDNNDQSDISGSEDE
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacacctacagatcccactggtgggatgcctcatcctggaccatctccaggacca
ggtccatctcctggaccaattctaggcccgagtccaggaccaggaccatcaccaggctct
gtacatagtatgatgggtccaggtccaagtccaggaccatcaaatgtaactcattcaatg
ccatcccaagctccaggcgagttccagcaggatagcatgcaccagatgcataagtccatg
gaagcaatccatgacaagagtatggctgatgaaatgcattatagtcagatgaaaagtatg
ggaatgaggccttctcatactggaatgggccctcctcagagtccaatggatcaacattct
caaggctatatgtctcctcatccatctcctatgagcgcaccggagcatattccgagtcca
atgtcagcaggtggtcccactcctcctcagattccaccatcacaggccacatctatattg
caaggagatcctcaggttatgagtcagcaaaacagaggtccttcaccttttaatccaatt
cagcttcaccaattaagggctcaaatcctggcttataaaatgctagctagaggacaacct
ctaccagataatctgcagctcgctgttcaagggaagcggtcactacccagcatgcaacag
caagtagcacctattgcctacaacagaccaccaagtataggcatgcattcaatggctggt
caggctgttggaccctcacaaatgatgccaggacatatgcctaatgttcataagccctgg
acagaaggtcaagttaatgaaatgggaattccaaacgcttctcaaaaaatacctactcaa
gctacttgtggaagaccttctcctgcgccagctgtgcagacaactccttctggccctggg
gcatcgttgccacaacaatctgttgtccagccttcaccaactatccaacttcatcagaag
caaaaccgtataacacccatccagaaaccacaagggctggatcctgttgaaattcttcaa
gaacgagagtacagacttcaggctcgaattgcacatcgtattcaagagcttgaaaactta
cctggttctttaccaccagatttgcgcaataaagctactgttgaattaaaagctcttcgc
ctgctcaacttccaaagacagctaaggcaagaagtcgttgcttgcatgcgtcgtgataca
actctggagacagcactgaacgtgaaagcctataaacgaagtaaaaggcagtcattaaga
gaggctcgtatcacagagaaattggagaagcaacagaagattgaacaagaacgtaagcgc
cggcaaaaacatcaggaatatctcaacagcatattgcagcatgcaaaagacttcaaggaa
tatcatcgttcagttacagggaaaattcagaagctttccagagcaattggtacttggcat
gccaataccgaacgtgagcagaagaaggaaacggagaggattgagaaagaaagaatgagg
agactaatggcagaagatgaagaaggttatcgaaaactaattgatcagaaaaaggataaa
cgtctggcatatctgcttcaacaaacagatgaatatgtagcaagccttactaaactggtc
tatgagcataaagctgcccaagctgctaaggaaaagaagaagaagaagaaaaagaagaaa
actgaagaacctgccgaaggaatgagctccagccttgctcctgatggtgaacttttggat
gaaagcagccagatgagtgatttgcctgtcaaagttatccatgttgaaactggcaaagtt
ttgcaaggacctgaggctccaaaagctgtccagttggatgcttggttggaaatgaatcct
gggtatgaagtagccccacgatcagacagtgaagaagaaagtggttcagaatatgaagag
gaggaggaagatgaagaaacaccagttgcacctgatactgaagaaaagaagattattgtt
tctaacattgaagatgtatctgacatttttgccaagcagataattgagtgtgctaagcaa
gatgttgatgatgaatatagcatgcgagcaggaatgaaaggttcccagtcatattatgca
gtagctcatgcagtaacagagagggtagagaaacaatctactctcctgatcaatggaact
cttaaacagtatcagcttcagggacttgaatggctggtttccctctacaataacaatttg
aatggaattttggctgatgaaatgggacttggaaagacaatccagactattgggctcatt
acatacctgatggaacacaagcgacttaatggaccgtatctcattattgttcctctctca
actttgtccaactgggtatatgagtttgataagtgggccccatctgttgtgaaaatttct
tataagggtactcctgcacttcgtcgatcatttattccacagttgcgcagtggaaagttc
aatgttcttttaaccacgtacgaatacatcattaaggacaaacatgtgcttgctaaactt
cgatggaaatacatgattgtcgatgaaggtcatcgtatgaaaaatcaccattgtaagctg
acccaagtgctgaatactcattatgttgcacctcgtcgagtcctcttgactgggacacct
ctgcaaaacaaacttcctgaactctgggcacttctaaattttcttttgccgactatcttc
aaaagctgcagcacctttgaacaatggtttaatgctccatttgccatgactggagaacgg
gtagatctaaatgaagaggaaacaatcttgatcattcgtcgtcttcacaaagtgctgcgt
cctttccttctgcgaagactgaaaaaagaagtggaatcccagttgccagaaaaggttgag
tatgtcatcaaatgtgacatgtcctcgctacagaaggttctatatcgtcacatgcaagct
aaaggtattcttctaacagatggctctgagaaagataaaaagggcaaaggtggtgctaaa
actctcatgaataccatcatgcaactgagaaaaatatgcaatcatcccttcatgtttcaa
catatagaggaatcttttgctgaacacctaggttataatggaggactcattactggtcct
gatctatatcgcgcttcaggaaaatttgaattactggaccgcattttgccaaaactacga
gttacaaatcacagggtactgctattctgccagatgacctcattgatgactattatggaa
gactactttgcattcagaaattttttgtatttgcgacttgatggaacaactaaagcagag
gaccgtggtgctttgttgaaaatgttcaatgaagaaaactcaaaatattttatattcttg
ctgagtacacgtgctggcggccttggtttgaatcttcaagcagctgatactgttatcatt
tttgacagtgattggaatccacatcaggatttacaagcccaagatagagcacatcgtatt
ggacagcagaatgaagttcgagtcctgcgcctgtgcacagtcaacagtgtggaagaaaag
attctcgctgctgccaaatacaagcttaatgtggaccaaaaggttatccaggctggtatg
tttgatcaaaaatcttcaagtcatgagcgccgagctttcctgcaagctttattggagcat
gaggaacagaatgagggggacaccaatgcttctccttcctgcagtactgcctgggaagaa
gatgaagttccagatgatgagactctgaatcagatgattgctcgaaatgaagaagaattt
gaattattcatgcgcatggatctagagcggcgaagagaagacgcacggaatccaaaacgc
aagccaagactgatggaggaagatgatttgccatcatggattgtcaaagatgatgcagaa
gttgaaagattgacctgtgaagaggaggaggagaagatgtttgggagaggttcacgcatg
cgcagggatgtggactacagtgatgcccttacagaaaaacagtggctaagggcaattgaa
gatggcaatttagaagaaatggaagaggaaatacgtcagaagaaagctaggaaacgcaga
agaaatgtggataaagattcatcaaaggaggatggaaaaaagaagaaaaagagaggcaga
cccccagcagaaaaactgtctccaaatccacctaggataaccaagcagatgaatgcaatc
attgatacagttataaactacagagacagcttgaaccgacaactgagtgaagtcttcatc
cagttaccatcacggaaggagttgcctgaatactatgagctgattcgaaaacctgtggat
ttcaaaaaaatcaaggaccgtattcgcaaccataaataccgtagtctgggagatctggag
aaggatgtaacactgttatgtcataatgctcagacgtacaatctagaaggatcacagatt
tacgaagattccattgttcttcaatcagtgtttaaaagtgcaaggcagaagatcgctaaa
gaagaggaaagtgaggaggaaagtaatgatgatgaggatgaggaggaggaatcaggatct
gagacaaaatcagtcaaagttaaaataaaacttggtcgaaaggacagtgacaaaagtcgt
gagaaaggaaaaagtaggaaacggctggttcgtactaaaatcaagcccgtcattagtgat
gatgacagtgatgatgaccaagataacaatgaccaatctgatatcagtggaagtgaagat
gaatga
DBGET
integrated database retrieval system
