Hemitrygon akajei (red stingray): 140741883
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Entry
140741883 CDS
T11019
Symbol
shq1
Name
(RefSeq) protein SHQ1 homolog isoform X1
KO
K14764
protein SHQ1
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
haka03009
]
140741883 (shq1)
Ribosome biogenesis [BR:
haka03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
140741883 (shq1)
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Gene cluster
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
Motif
Other DBs
NCBI-GeneID:
140741883
NCBI-ProteinID:
XP_072928491
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Position
19:complement(37722260..37853664)
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AA seq
625 aa
AA seq
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MITPNFELSQDANFLTIIIHIPYAKINEVDLYIDGVDFKFYVKPYFLRLTLPGKIVEDGR
ETASYDADAGIFTIKVPKQTPEEYFEGLDMLTALLAPRGSRSAKPLVEELGPPANAEIED
EEFDWEIEQTPYEEFEKDVFNSSYSYGFGNLRSGVFRRLQNELSDVIDLKEPDSTTPVER
RQRRLAAEEAKFDSDHYLADLFEDDAIQHLLKYEPWWQNIQRAKENAKETQTEENDSTDS
RGQCVKFSEDEKEQLRKFTNRNYLLDKSSCQIAFTSLVDILLAYAYEVRSTEGESNTESS
WNIWKLSGTLCWLETYHSLQEVVISFSRRVLCYPFYRHFHLALKAVEDAVLILQLGKSAV
LKCLLAIHKIFRESDPAYLFNDLYITDYCIWIQKVKSKKLALLAKSLQNVKVTKSDLGFE
LRELEEAALLVQQEENKIKQGKTDPQLIQSESETEDDEESTSSSSDTGESDLCESDSSNQ
SSSEGTGRNGLLLGKEADYVTDMEVKEPLIKLSCGKEAVHMADAQYPDKCALREDPTAKS
PPRRLIEELADQLQSVGLSEHCEKSAIENSNASEHKQTSQPVQSLAQYQHSQTTSQQTFL
EVSPERNCLLLVAGPDNTEDFTNLA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgatcactcccaattttgaattaagtcaagatgctaacttcctcactattataatccat
atcccttatgcaaaaattaatgaagttgacttgtacattgatggagtggacttcaaattt
tatgtcaagccttacttcttaagattgactcttccaggaaagattgtggaggatggaaga
gaaacggcttcatatgatgcagatgcaggaatttttaccataaaagttccgaagcaaact
cctgaagagtattttgagggattggatatgctgactgcacttttggcgccaaggggatca
agatctgcaaagcctctagtggaagagcttggaccacctgctaatgctgagattgaagat
gaagaatttgactgggaaattgagcaaacaccctatgaggaattcgaaaaggatgttttc
aattcaagctattcctatggttttggaaatctacgatcaggagtcttcagaagattgcag
aatgaactcagtgatgtgattgacctgaaggaaccggatagcacaactccagtggaacgt
cggcaaagacgtctggctgctgaagaggccaagtttgactctgaccattatcttgctgat
ctctttgaagatgatgccattcagcatttgctgaagtacgaaccttggtggcaaaacatt
cagagggcaaaagaaaatgccaaggaaactcagactgaagaaaatgattcgacagattca
agaggacagtgcgtcaaattctccgaggatgaaaaggagcagctgcgaaaattcaccaac
agaaactacctgctggataaaagctcttgtcaaattgccttcaccagcctggttgacata
ctgcttgcctatgcatatgaagtccgcagcactgaaggggaatcaaataccgaatcgtca
tggaacatctggaaactcagtggaacactttgttggcttgaaacttaccattctcttcag
gaagtcgtcatatccttcagcagaagagttctgtgttatccgttttaccgacatttccac
ttggctctgaaagctgtggaggatgcagtcttaatacttcagttgggtaagtctgctgtt
ttgaaatgtttgctggccatccacaaaatcttcagggaaagtgaccctgcgtatctcttc
aatgatctttacatcacagactactgcatttggatccagaaagtgaagtcaaagaagctt
gctttgttggctaagtcgctacaaaatgtaaaagtcacgaagagtgatttgggctttgaa
ctaagggaactggaggaagcagcattattagttcaacaggaagagaataagatcaaacaa
gggaagactgacccccaactaattcagtcagagagtgagacagaggacgatgaggaatca
accagctcctcctcggatacaggagaatctgatctctgtgaaagtgattcgtctaaccag
agcagttctgaaggaacagggagaaatggattgcttctcggaaaagaggctgactatgta
actgatatggaagttaaggagcctttgatcaaattgagttgtggcaaagaagctgtacac
atggcggacgcgcagtatccagacaaatgtgctttgagggaagatcccactgctaaatca
cccccaagaagattgatagaagaacttgcagatcagttgcagtcagtggggctttcggag
cactgtgaaaaatctgctattgagaattctaatgcttcagagcacaagcaaacaagccag
cctgttcagagtttggcacagtaccagcattcacagacgacctcacagcagactttctta
gaggtgtctcctgagaggaattgcctgctgctcgttgcaggtcctgataatacagaggat
tttacaaacctggcatga
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