KEGG   Hemitrygon akajei (red stingray): 140741930
Entry
140741930         CDS       T11019                                 
Symbol
sec13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
haka  Hemitrygon akajei (red stingray)
Pathway
haka03013  Nucleocytoplasmic transport
haka04141  Protein processing in endoplasmic reticulum
haka04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:haka00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    140741930 (sec13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    140741930 (sec13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    140741930 (sec13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:haka03019]
    140741930 (sec13)
   04131 Membrane trafficking [BR:haka04131]
    140741930 (sec13)
Messenger RNA biogenesis [BR:haka03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     140741930 (sec13)
Membrane trafficking [BR:haka04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    140741930 (sec13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    140741930 (sec13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    140741930 (sec13)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_Gbeta ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd EIF3I WDR55 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N Beta-prop_WDR41 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd NBCH_WD40
Other DBs
NCBI-GeneID: 140741930
NCBI-ProteinID: XP_072928607
LinkDB
Position
19:51508908..51572290
AA seq 320 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILVADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKIIIWKEENGTWDKMYEYTGHDSSVNSLCWAPHEFGLIL
ACGSSDGAISVLSYTGDGQWEMKKISNAHTIGCNAVSWAPAVLPGSLIDQPSGQKPNYIK
RFVSGGCDNLVKIWKEEEGQWKEDQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVF
IWICDDPAGNTWAHKLLHKFNDVVWHVSWSITGNILAVSGGDNKVSLWKESVEGQWVCIS
DVNKGQGSVSSVTDGQQNEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtttccgtgatcaacacagtggatacatcccatgaggatatgattcacgatgcacag
atggattactacggtactcgtctcgcaacctgctcctctgatcgatctgtaaagatattt
gatgttaagaatggaggtcaaatccttgttgctgacctgagaggccatgaaggtcctgtg
tggcaggtggcatgggcacatccaatgtatggaaacatcttggcatcttgttcctacgac
cggaagatcatcatttggaaagaggagaatgggacttgggacaagatgtatgaatacaca
ggccatgattcttcagtcaactctttatgctgggcaccgcacgagtttgggttgattctt
gcatgtggtagctcagacggtgcaatctcagtgctttcgtacacgggtgatggtcagtgg
gaaatgaagaaaatcagcaatgcacacacgattggttgcaatgctgtcagttgggctcct
gcagttttaccaggtagccttatagaccagccctcgggacagaaaccaaactacatcaag
agatttgtgtcaggaggctgtgacaacctggtcaaaatttggaaagaggaggaaggtcaa
tggaaagaggatcaaaagcttgaagcccatagtgactgggttcgagatgttgcctgggct
ccatctatagggcttcccacaagtacaattgctagttgctcccaggatggccgagttttc
atctggatttgtgatgatcctgctgggaacacatgggcgcacaaactgttgcacaagttc
aatgatgtggtgtggcacgtcagctggtccatcactgggaatatcttggcagtctctgga
ggtgacaacaaggtcagcttgtggaaggaatcggtggaaggccagtgggtttgcatcagt
gatgtgaacaagggccaagggtcagtatcaagtgtcacagacggccaacagaacgagcag
tga

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