Haloterrigena alkaliphila: J0X25_03305
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Entry
J0X25_03305 CDS
T07793
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hakz
Haloterrigena alkaliphila
Pathway
hakz03420
Nucleotide excision repair
hakz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hakz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J0X25_03305
03430 Mismatch repair
J0X25_03305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hakz03400
]
J0X25_03305
Enzymes [BR:
hakz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J0X25_03305
DNA repair and recombination proteins [BR:
hakz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J0X25_03305
MMR (mismatch excision repair)
Other MMR factors
J0X25_03305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_12
AAA_30
Viral_helicase1
DUF2800
Motif
Other DBs
NCBI-ProteinID:
QSX00006
UniProt:
A0A8A2VHU4
LinkDB
All DBs
Position
674039..677965
Genome browser
AA seq
1308 aa
AA seq
DB search
MAEERRERRPDHGGSRVGDEGSDGDLEPKGNQRAVIESRAACTSVDAGAGTGKTTTMLMR
IERAIERGDVDPEDVLVLTFANEAAGSIREAVAERLDPAAAAAIDVYTYHSFCYRLVREY
AYYLGYSPEFDVVTERTRRRMVGRLLAENDYGFATAAGRSDGSPEDLTAAVDGFIRAMSQ
EDVTPDELQERLPAVRTLELCNEFVLWLERTASEELSFDNAALRYFNADDHLEAGRESLV
DYGKLLEYCREKIAEAPAEFREDDVVRDVDRYLRVLQECVTNAIDVLSLEDPTTKQLPRA
LFGNEIWREATNRIEQSPFGRLKHYVEFMRLARHYADVYADYHDALEAERALDFDELVRT
ATGLLDDPAIAGEITGQWEQVYCDEFQDTDETQFALITELTDGPDRPDLLAIGDKDQAIY
GWRGTDREGLDRLADAYDDHEAIELELNFRSRQEILDLTNHCDYGPQSSKTLREVGRTPG
EYRADGNSAGESEDAALEGSADDEAATDDADRAVTNGDPANPPDRVVKIESARVGPSTAE
QVATTVSRLLNGEAENVPQRSLEDIAVIVRTNRHAQSVAEELRDLQIPYEISGSPRGEIS
PGVRTLLSYFRVLVDPTADAHLRRVLLYRYRLPESDLATLQRRDGSLYDAVIDDGSEGES
DASLEHPERVERARGHLAALEHLRDVYPLSGFVRRFREVTRLEWFLTSEEREELERIERF
VEAYTGDSVIQTLTPSFVDALERTLRGGESERTRGTQSTDSIDVMTVHQAKGLEFDTVLV
PYLSDEEWCVERDYARRARYRLLAAMLDDDVDSPLLADLAAETVGEEWRVLHVALTRAEN
HLFVFGSEYDYDGEEGDLAASTADACLADEIEWSVAGRRMNLWSSLRESFERVRETYPGT
VADRTEEIELSAGVSPGTITYYADYGDRPVEPLETREAIETVHRLGRLLRDGTLLPAADA
ASHGGNEAGDRGESGRGGRDGSRDEGGGRNGGGGGTAASRSRRRVPTGRQLSALTPDTVR
FPVETLANAAELPAALRHSYSAMETHDTCPRKHYLDHVVRAFDDPAAGTGAGMGTGVGSQ
GTRAETPSEPGSRLVGTVFHDVAEEAFYREYRTREAWREAAVRQLTARDLLEHREAVLAC
IDRFFEADAPAFDAPVADWEPLAAELPFALADVADVRGDVVGYVDSIRRTPDGGLAVLDY
KATAERIAPADATQLALYARACQRRFDDPIAAVGYVYVGDVEGPRVDLIDPDDLPPWSAV
RETLEAVDAPSFGETTPGDHCRYCPHRSLGCGPDGVVEAADIEVSSDD
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagagcggcgggagcggcgaccggaccacggcggctcacgagtgggcgacgag
ggcagcgatggcgacctcgagccgaagggcaaccagcgggccgtcatcgagagccgcgcg
gcctgcacctccgtcgacgccggcgcggggacggggaagacgacgacgatgctcatgcgg
atcgaacgcgcgatcgagcgcggcgacgtcgacccggaggacgtgctggtgttgaccttc
gccaacgaggccgccgggagcatccgcgaggccgtcgccgagcgcctcgatcccgcggcc
gccgcggcgatcgacgtctacacctaccactccttctgttaccggctggtccgggagtac
gcctactacctgggctactcgccggagttcgacgtcgtcaccgagcgcacgcgccgacgg
atggtcggccgactgctcgccgagaacgactacggcttcgcgaccgcggccgggcgaagc
gacggctcgcccgaggacctcaccgccgccgtcgacggcttcatccgggcgatgagtcag
gaggacgtcacgcccgacgagttacaggagcgattgcccgcggtgcgcaccctcgaactc
tgcaacgagttcgtcctctggctggagcgcacggcgagcgaggagctttccttcgacaac
gcggcactgcgctacttcaacgccgacgaccacctcgaggccggccgggagtcgctggtc
gactacggcaaactcctcgagtactgccgcgagaagatcgcggaggcccccgccgagttc
cgcgaggacgacgtggtccgcgacgtcgaccgctacctccgggtgctccaggagtgcgtg
acgaacgcgatcgacgtcctgtcgctcgaggatcccacgacgaaacagcttccgcgcgcc
ctgttcggcaacgagatctggcgggaggccacgaaccggatcgagcagagcccgttcggc
cgcctgaaacactacgtcgagttcatgcgcctcgcgcgccactacgccgacgtctacgcc
gattaccacgacgccctcgaggccgagcgcgcgctggacttcgacgaactggtgcggacg
gcgacggggctgttggacgatccggcgatcgccggcgagatcacgggccagtgggagcag
gtctactgcgacgagttccaggacaccgacgagacgcagttcgcgctgatcaccgaactc
acggacggccccgatcggcccgacctgctcgccatcggcgacaaggatcaggccatctac
ggctggcggggcaccgaccgcgaagggctggatcgactcgcggacgcctacgacgaccac
gaggcgatcgaactcgaactcaacttccgctcgcgccaggagatcctcgacctcacgaac
cactgcgattacggcccgcagtcctcgaagacgctccgcgaggtcggccggacgcccggt
gagtaccgggccgacgggaattcggcgggagaatcggaggacgccgcgctcgagggaagt
gctgacgacgaggcggcgaccgacgacgccgacagagcggtgacgaacggcgatcccgcc
aatccaccggatcgcgtcgtcaagatcgagagcgcccgcgtgggcccgtcgacggccgaa
caggtcgcgaccaccgtctcgcggctactgaacggcgaggccgagaacgtcccccagcgc
tcgctcgaggacatcgcggtcatcgttcggaccaaccgccacgcgcagtcggtcgccgag
gaactgcgggacctccagatcccctacgagatttcgggctccccccgcggcgagatttcg
cccggcgtccggacgctgctctcgtacttccgcgtgctcgtcgatccgaccgcggatgcc
cacctccggcgcgtgttgctctaccggtatcggctcccggagagcgacctcgcgacgctc
cagcgacgggacggatcgctgtacgacgcggtgatagacgacgggtcggagggcgaatcc
gacgcgagcctcgagcaccccgagcgcgtcgaacgggcccggggccacctcgcggcgctc
gagcacctgcgagacgtctacccgctgtcggggttcgtccgtcggttccgcgaggtgacc
cgcctcgagtggttcctgacgagcgaggagcgcgaggaactcgagcggatcgagcggttc
gtcgaggcctacaccggtgactcggtgatacagacgctgacgccgtcgttcgtcgacgcg
ctcgagcggacgctgcggggcggcgagagcgaacgcacccgcggcacccagtcgacggac
tcgatcgacgtcatgacggtccaccaggccaaggggctggagttcgacacggtgctcgtc
ccctacctctccgacgaggagtggtgcgtcgagcgcgattacgcccggcgggccaggtac
agactgctcgcggcgatgctggacgacgacgtcgactcgccgctgctggcggatctggcg
gccgagaccgtcggcgaggagtggcgggtgcttcacgtcgcgctcacccgcgccgagaac
cacctgttcgtcttcggctccgagtacgactacgacggcgaggagggcgatctggcggcc
tcgaccgccgacgcctgcctcgccgacgagatcgagtggtcggtcgccggccggcgaatg
aacctctggtcgtcgctccgggagagtttcgagcgggtgcgcgagacctaccccgggacc
gtcgccgaccggaccgaggagatcgagctctcggccggcgtcagcccggggacgatcacc
tactacgccgactacggcgaccgaccggtcgaacccctcgagacgcgggaggccatcgag
acggtccaccgactcgggcggctgctgcgcgacgggacgctgctccccgcggccgacgcg
gcgagtcacggcggcaacgaagccggggacagaggcgaaagcgggcgcggaggcagggac
gggagcagggacgagggcgggggcaggaacgggggcgggggcgggaccgcggccagtcgc
tcgaggcgtcgggtaccgaccggtcgccagctctcggcgctgacgcccgacaccgtccgg
ttccccgtcgagacgctcgcgaacgccgccgagttgccggccgcgttgcgccacagctac
tcggcgatggagacccacgacacgtgcccgcgaaaacactacctcgatcacgtcgtgcgg
gcgttcgacgaccccgcggcgggaacgggagcgggaatgggcacgggagtcggttcgcag
ggaactcgagcggagacaccgtccgaacccggctcgcggctcgtcggtaccgtcttccac
gacgtcgccgaggaggccttctaccgcgagtaccggacccgggaggcgtggcgcgaggcc
gccgtccgacagctcaccgcgcgggatctgctcgagcaccgcgaggccgtcctcgcctgt
atcgatcgcttcttcgaggccgacgcgccggcgttcgacgcgccggtcgccgactgggag
ccgctggccgcggaactccccttcgcgctcgcggacgtcgccgacgtgcgcggcgacgtc
gtgggctacgtggactcgatccggcggacccccgacggcggcctcgcggtgctcgactac
aaggcgacggccgagcggatcgcccccgccgacgcgacgcaactcgcgctgtacgcccgg
gcctgccagcggcggttcgacgaccccatcgcggcggtcggctacgtctacgtcggcgac
gtcgaggggccgcgcgtcgacctcatcgatcccgacgacctgccgccgtggtcggcggtt
cgggagacgctcgaggcggtcgacgcgccgtcgttcggcgagacgacgccgggcgaccac
tgtcggtactgcccgcaccggtcgctggggtgtgggcccgacggggtcgtcgaggcggcc
gatatcgaggtttcaagcgatgactga
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