KEGG   Haloterrigena alkaliphila: J0X25_06695
Entry
J0X25_06695       CDS       T07793                                 
Name
(GenBank) replication factor C small subunit
  KO
K04801  replication factor C small subunit
Organism
hakz  Haloterrigena alkaliphila
Pathway
hakz03030  DNA replication
Brite
KEGG Orthology (KO) [BR:hakz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    J0X25_06695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hakz03032]
    J0X25_06695
DNA replication proteins [BR:hakz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     J0X25_06695
SSDB
Motif
Pfam: Rep_fac_C Intein_splicing AAA LAGLIDADG_3 DNA_pol3_delta2 AAA_lid_RFC1 AAA_assoc_2 AAA_14 RCF1-5-like_lid Rad17 AAA_22 HTH_28 DUF433 DNAX_ATPase_lid HTH_23
Other DBs
NCBI-ProteinID: QSX00641
UniProt: A0A8A2VIV7
LinkDB
Position
1379188..1382280
AA seq 1030 aa
MSEADAEAAEPTPGKTEVWIEKYRPERLDEIKGHENIVPRLKRYVEQDDLPHLLFAGPAG
TGKCVTGETPVLTNEGVIPISTVVGTVDGFATPDDELEILTYDNDGSFEYVAPSHVFSKE
ATDLVSIETRDGNEFTVTPEHKLLVADEAGLEWRQAGSLSGDERIVRPLETPVVDDGSSA
SLGWPSAMDGDRTFVTVSESFAERYDIPAEENYVGQKKTVIGCLRRGYSVDEIVAEYDIT
RKTARNYARDAPIDLEVPSTTCSLAYLRSLDAAHSELRANVESVQYVTPYNNRSSPITPP
WELTPDLARFVGLAISEARIENGRIKFYNTDDALCESFERIARELLDVETTRGVRKDVPY
VELRTKSLHHFLESCFDVFGDSPESSIGSTLVHAPDDVRAAFLQAVFDSEAYVADQGTIE
LTQKDESLITLCSYLLASFGVPTRRKRVEKRATNGSGPKQEYHALYVSGVSALSRFEDAV
GFTIDHKRARLADATAGTGNPNYDTIPAQAAVDDLCRTLALKKEPLVTETLNPDNPGRET
YLEDIDRVLEAASDRLEAAQRVKQELEQVRSDIRSVSTVPTAWVDQRDALEPLEARKEVE
SATGIRTDRLLEYADGRRSPTASRAGELLVTLESRTETPDTESIQKSVQEAIDALGVSDN
RIAEKTELLGTDVRNLIENDDHDLASLPRFETVADRILEVADEMCSMAVVEQLVALDQLS
RGTLYFDRVTNVEGIQDEQRVYDLTVPGTRNYVAGDVPTVMHNTTAAKAIARELYDDDWK
ENFLELNASDQRGIDVVRDRIKDFARSSFGGYNHRIIFLDEADALTSDAQSALRRTMEQF
SNNTRFILSCNYSSQIIDPIQSRCAVFRFTELTEDAVEAQVREIAANEDIEVTDDGVDAL
VYAADGDMRKAINGLQAAAVMGETVDEETVFAITATARPEEVEEMVERAIDGDFTAARAA
LEDLLMERGLAGGDVIDQLHRSAWQFDIPERATVRLLERLGEADYRITEGANERLQLEAL
LASLALEDEA
NT seq 3093 nt   +upstreamnt  +downstreamnt
atgagcgaggccgacgccgaggcggcggagccgactcccggcaagaccgaggtctggatc
gagaagtaccggccggaacggctcgacgagatcaagggtcacgagaacatcgtgccgcgt
ttgaagcggtacgtcgagcaggacgacctcccccaccttctgttcgctggcccagcggga
acagggaagtgtgtcaccggtgagacgccggtactgaccaacgagggcgtcatcccgatt
tctactgtcgtcggcacggtcgacggatttgctacgccggatgacgagctcgagatcttg
acctacgacaatgatggatcgttcgagtacgtcgccccgtcccacgtcttctcgaaagaa
gcaactgatctcgtctcgatcgaaacgcgagacggaaacgagttcacggtcacgccggaa
cacaaactcctcgtagcggacgaagcgggactcgagtggcgacaggccggatcgttgtcc
ggcgacgagcggatcgttcggccgctggaaacgccggtcgttgacgacggctcgtccgcg
tcgctcggctggccctcagcaatggacggcgacagaacgttcgtcaccgtttccgagtcg
ttcgccgagcgatacgatatcccggccgaagagaactacgtcggtcagaagaaaacggtg
atcggctgtcttcgacgaggctattcggtcgacgagatagtcgccgagtacgatattact
cgtaaaactgcccgaaactacgcgcgagacgccccgatcgatctcgaggtgccgtcgacg
acctgttcgctggcgtacctccgttcgctcgatgccgcgcactcggaacttcgagcgaac
gtcgaatccgtacagtacgttacgccgtacaacaaccgatccagtccgatcacgccgccg
tgggaactcacgccggatctggcgcggttcgtcgggcttgcgatcagcgaagcgcgcatc
gagaacggccgcatcaaattctacaacaccgacgacgcactatgcgagtcgttcgagcgg
atcgctcgagaactgttagatgtcgagacgactcgtggcgtacggaaagacgtcccgtac
gtcgaacttcgaaccaagtcgcttcaccacttcctcgagtcctgtttcgacgtctttggt
gactcgccggagtcgagtatcggttcgaccctcgttcacgctccggacgacgttcgagcg
gcgttcctgcaggccgttttcgattcggaagcgtacgtagcagatcagggaacgatcgaa
ctgacgcagaaggacgaatcgctgatcacactctgttcgtatctgctcgcctccttcgga
gtcccgacgcgtcggaaacgcgtcgagaagcgagcgacgaacggatctgggccgaaacag
gagtaccacgcgctgtacgtctccggcgtgtcggcgctctcgcgcttcgaggacgccgtc
ggattcaccatcgaccacaagcgcgctcggctcgcagacgcgacggccggcaccgggaat
ccgaattacgacacgatacccgcacaggcggccgtagatgacctatgtcgaacgctcgca
ctgaaaaaggagccgctggtgaccgagacgctgaaccccgacaatcccggccgcgagacc
tatctcgaggacatcgaccgcgtgctcgaggcggcgtcggaccgtctcgaggccgcacag
cgagtcaaacaggagctcgagcaggtccgatcagatatccgttcggtgagtactgttccg
acggcctgggtcgatcagcgggacgcactggaaccgctcgaagcgcgaaaggaggtcgag
tcggcgaccggcatccggacggatcggctgctcgaatacgccgacggacgacggtcgccg
actgcgagccgtgcaggtgaattgctcgtcacccttgagtcgcgtaccgaaacgccggac
accgaatctatccagaagtcggtgcaggaagcgatcgacgcactcggcgtctctgacaat
cgaattgcggagaaaacggagttgctcggaacggacgttcgaaacctcatcgaaaacgac
gatcacgacctcgcatcgctgccgcggttcgagaccgtggccgatcgaattctcgaggtg
gccgacgaaatgtgctcgatggcggtcgttgaacagctggtcgcgctcgaccaactctcg
cgtgggacgctctacttcgaccgcgtgacgaacgtcgagggaatacaggacgaacaacgc
gtttacgatctgacggtacccggaacgcgaaactacgtcgcaggggatgtcccgacggtc
atgcacaacacgaccgcagcgaaggcgatcgcccgcgaactctacgacgacgattggaag
gagaacttcctcgagctcaacgcctccgaccagcgcgggatcgacgtcgtgcgcgatcgg
atcaaggacttcgcgcgctcctcgttcggcggctacaaccaccgcatcatcttcctcgac
gaggccgacgcgctgacctccgacgcccagtccgccctgcgccggacgatggagcagttc
tcgaacaacacccggttcatcctctcgtgtaactactcgagccagatcatcgaccccatc
caatcccgctgtgcggtcttccgctttaccgaactcaccgaggacgccgtcgaggcccag
gttcgcgaaatcgcggcgaacgaggatatcgaggtcacggacgacggcgtcgacgcgctc
gtctacgcggccgacggcgacatgcgcaaggcgatcaacggcctgcaggccgcggccgtg
atgggcgagaccgtcgacgaggagaccgtcttcgcgatcaccgccacggcccgtcccgag
gaggtcgaggagatggtcgaacgcgccatcgacggcgacttcaccgccgctcgcgcggcc
ctcgaggacctcctgatggagcgcggcctcgccggcggcgacgtcatcgatcaactccac
cgctcggcgtggcagttcgacatcccggaacgggcgaccgtgcgactgctcgagcgcctc
ggcgaagccgactaccggatcaccgaaggcgcgaacgaacggctgcaactcgaggcgctg
ctggcgtcgctggcgctcgaggacgaggcctga

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