Haloterrigena alkaliphila: J0X25_08305
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Entry
J0X25_08305 CDS
T07793
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
hakz
Haloterrigena alkaliphila
Pathway
hakz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hakz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J0X25_08305 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hakz03021
]
J0X25_08305 (rpoB)
Enzymes [BR:
hakz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J0X25_08305 (rpoB)
Transcription machinery [BR:
hakz03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
J0X25_08305 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QSX00946
UniProt:
A0A8A2VKD5
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All DBs
Position
1714305..1716134
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AA seq
609 aa
AA seq
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MSSQKREAKVYVNGSLVGTHPNPHELAEQIREARRIGDVSEMVNVSVKDRTREVIVNADA
GRARRPLLVVEDGEARISEQEIEALREGDLEFEDLVDHGYIEFIDAEEEEDILVAVDEDD
LTEKHTHLEIDPSLIFGIGAGMIPYPEHNASPRITMGAGMVKQSLGLPSANYRIRPDTRQ
HLLHYPQLSMVKTQTTEQIGFDERPAAQNFVVAVMSYEGFNIEDALVMNKASVERALARS
HFFRTYEGEERRYPGGQEDRFEIPSQDVRGARGEEAYNHLDEDGLVNPETAVDENSVLLG
KTSPPRFLEEPDDMGGLSPQKRRETSVTMRSGESGVVDTVTLMEGEDGSKLSKVSVRDER
IPELGDKFASRHGQKGVVGHLAPQEDMPFTEEGVVPDLVLNPHALPSRMTVGHILEMIGG
KLGAMEGRRVDGTPFLGEDEDELRDGLEEIGFNSAGKETMYSGISGEKIEAEIFVGIIFY
QKLYHMVSNKLHARSRGPVQVLTRQPTEGRAREGGLRIGEMERDVFIGHGAAMTLKERLL
DESDREFIHVCANCGMSAVENVEQRRVYCPNCDEETDIHEIEMSYAFKLLLDEMKALGIA
PRLELEDAV
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccaaaagcgagaagccaaggtgtacgtcaacgggtcgctggtgggaacacac
ccgaacccgcacgaactggcagaacagatccgcgaggcgcgacgcatcggcgacgtcagc
gagatggtcaacgtctcggtgaaagaccgcacccgcgaagtgatcgtcaacgccgacgcg
ggacgggcccgacggcccctgctggtcgtcgaggacggcgaggctcgcatctccgagcag
gagatcgaggcgctgcgggagggtgacctcgagttcgaggatctcgtcgaccacggctac
atcgagttcatcgacgccgaggaggaagaggacatcctcgtggccgtcgacgaggacgat
ctgaccgagaaacacacccacctcgagatcgacccgtcgctgatcttcgggatcggcgcg
gggatgatcccctaccccgagcacaacgcgagtccgcgtattacgatgggggcggggatg
gtcaagcagtcgctgggcctgcccagcgcgaactaccggatccggccggacacgcgccag
cacctgctgcactacccgcagctctcgatggtgaagacccagacgaccgaacagatcggc
ttcgacgagcgacccgcggcccagaacttcgtcgtcgccgtgatgagctacgaggggttc
aacatcgaggacgcgctggtcatgaacaaagccagcgtcgagcgcgcgctcgcccgctcg
cacttcttccggacctacgagggcgaggaacgccggtacccgggcggtcaggaggaccgc
ttcgagatcccctcccaggacgtccgcggggcccgcggcgaggaagcgtacaaccacctg
gacgaggacggtctcgtcaatcccgagacggcggtcgacgagaacagcgtcctgctcggg
aagacctccccgccgcgattcttggaggagcccgacgacatgggtggtctctcgccccag
aagcgacgtgagacctccgttacgatgcgctcgggcgagtcgggcgtcgtcgacaccgtc
accctgatggagggcgaggacggctcgaagctctcgaaggtctccgtgcgcgacgagcgg
atccccgaactcggggacaagttcgcgagccggcacggtcagaagggggtcgtcggccac
ctcgcgccccaggaggacatgccctttaccgaggagggggtcgtccccgacctcgtgctc
aatccgcacgcgctgccgtcgcggatgaccgtcggccacatcctcgagatgatcggcggt
aaactcggcgcgatggaggggcgtcgcgtcgacgggacgccgttcctcggcgaggacgag
gacgaactccgcgacggcctcgaggagatcggcttcaactcggcgggcaaggagaccatg
tactcggggatctccggcgagaagatcgaggccgagatcttcgtcgggatcatcttctac
cagaagctctaccacatggtctcgaacaaactgcacgcccgctcgcgcgggccggtgcag
gtgctgacccgccagcccacggagggtcgcgcccgcgaaggcggcctccgtatcggggag
atggaacgcgacgtgttcatcggccacggggccgcgatgacgctgaaagaacgactcctc
gacgagtccgaccgcgagttcatccacgtctgtgcgaactgcgggatgagcgcggtcgag
aacgtcgaacagcggcgtgtctactgtccgaactgcgacgaggagaccgatatccacgag
atcgagatgagttacgccttcaaactcctgctcgacgagatgaaggcgctgggtatcgcg
ccgcgactggaactggaggacgccgtctaa
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