Haloterrigena alkaliphila: J0X25_13145
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Entry
J0X25_13145 CDS
T07793
Symbol
fen
Name
(GenBank) flap endonuclease-1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
hakz
Haloterrigena alkaliphila
Pathway
hakz03030
DNA replication
hakz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hakz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J0X25_13145 (fen)
03410 Base excision repair
J0X25_13145 (fen)
03450 Non-homologous end-joining
J0X25_13145 (fen)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hakz03032
]
J0X25_13145 (fen)
03400 DNA repair and recombination proteins [BR:
hakz03400
]
J0X25_13145 (fen)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hakz04147
]
J0X25_13145 (fen)
DNA replication proteins [BR:
hakz03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
J0X25_13145 (fen)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
J0X25_13145 (fen)
DNA repair and recombination proteins [BR:
hakz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
J0X25_13145 (fen)
Exosome [BR:
hakz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
J0X25_13145 (fen)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
DUF7291
14-3-3
Motif
Other DBs
NCBI-ProteinID:
QSW98339
UniProt:
A0A8A2V8M7
LinkDB
All DBs
Position
complement(2716713..2717690)
Genome browser
AA seq
325 aa
AA seq
DB search
MGNAALRDIAVIEEIPFSEIEGIVAVDAHNWLYRYLTTTVKWTDSATYTTADGTEVANLV
GIVQGLPKFFENDITPVMVFDGGPSDLKEDEIESRREQRRSYEEQLETAREEGDEVAIAQ
LESRTQRLTPTIQETSRELLRLLDVPIVEAPAEGEAQAAHMVRRGDADYVGSEDYDALLF
GAPLTLRQLTSKGDPELMDLEATLAHHDLTLEQLIDAAILIGTDFNEGVSGIGPKTAIKA
ITEHGDLWSVLEARGDHVEYGDRVRQLFRDPDVTDDYEFETDLDPDLEAARAYVCEEWSV
DEGEVERGFERIEESVTQTGLDRWT
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgctgcactccgggacatcgccgtcatcgaggagatacccttctccgagatc
gagggcatcgtcgccgtcgacgcgcacaactggctctaccgatacctgacgacgacggtc
aagtggaccgacagcgcgacgtacacgaccgctgacggcaccgaggtcgccaacctcgtg
gggatcgtccagggcctgcccaagttcttcgagaacgacatcacgccggtgatggtcttc
gacggcggtccctccgacctgaaggaagacgaaatcgagtcacggcgcgagcagcgccgg
agctacgaggagcaactcgagaccgctcgcgaggagggcgacgaggtcgccatcgcgcaa
ctcgagtcccggacccagcggctgacgccgacgatccaggagaccagccgcgaactcctc
cgactgctcgacgtgccgatcgtcgaagcgccggcggagggtgaggcgcaggcggcccac
atggtccgccgcggcgacgccgactacgtggggtcggaggactacgacgccctcctgttc
ggcgctccgctgacgttgcgccagctaacgagcaagggcgaccccgaactgatggatctc
gaggcgacgctcgcccaccacgacctcacgctcgagcaactcatcgacgcggcgatcctc
atcgggacggacttcaacgagggcgtctcgggaatcggtcccaaaaccgccatcaaagcg
atcaccgaacacggtgacctctggagcgtcctcgaagcccgcggcgaccacgtcgagtac
ggcgaccgcgtccggcaactgttccgagaccccgacgtgaccgacgactacgagttcgag
acggatctcgacccggacctcgaggccgcccgggcgtacgtctgcgaggagtggagcgtc
gacgagggcgaagtcgaacgcggcttcgagcgcatcgaggagagcgtcacgcagacggga
ctggatcgctggacctga
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