KEGG   Haloterrigena alkaliphila: J0X25_13145
Entry
J0X25_13145       CDS       T07793                                 
Symbol
fen
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
hakz  Haloterrigena alkaliphila
Pathway
hakz03030  DNA replication
hakz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hakz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    J0X25_13145 (fen)
   03410 Base excision repair
    J0X25_13145 (fen)
   03450 Non-homologous end-joining
    J0X25_13145 (fen)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hakz03032]
    J0X25_13145 (fen)
   03400 DNA repair and recombination proteins [BR:hakz03400]
    J0X25_13145 (fen)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hakz04147]
    J0X25_13145 (fen)
DNA replication proteins [BR:hakz03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    J0X25_13145 (fen)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     J0X25_13145 (fen)
DNA repair and recombination proteins [BR:hakz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     J0X25_13145 (fen)
Exosome [BR:hakz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   J0X25_13145 (fen)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc DUF7291 14-3-3
Other DBs
NCBI-ProteinID: QSW98339
UniProt: A0A8A2V8M7
LinkDB
Position
complement(2716713..2717690)
AA seq 325 aa
MGNAALRDIAVIEEIPFSEIEGIVAVDAHNWLYRYLTTTVKWTDSATYTTADGTEVANLV
GIVQGLPKFFENDITPVMVFDGGPSDLKEDEIESRREQRRSYEEQLETAREEGDEVAIAQ
LESRTQRLTPTIQETSRELLRLLDVPIVEAPAEGEAQAAHMVRRGDADYVGSEDYDALLF
GAPLTLRQLTSKGDPELMDLEATLAHHDLTLEQLIDAAILIGTDFNEGVSGIGPKTAIKA
ITEHGDLWSVLEARGDHVEYGDRVRQLFRDPDVTDDYEFETDLDPDLEAARAYVCEEWSV
DEGEVERGFERIEESVTQTGLDRWT
NT seq 978 nt   +upstreamnt  +downstreamnt
atgggaaacgctgcactccgggacatcgccgtcatcgaggagatacccttctccgagatc
gagggcatcgtcgccgtcgacgcgcacaactggctctaccgatacctgacgacgacggtc
aagtggaccgacagcgcgacgtacacgaccgctgacggcaccgaggtcgccaacctcgtg
gggatcgtccagggcctgcccaagttcttcgagaacgacatcacgccggtgatggtcttc
gacggcggtccctccgacctgaaggaagacgaaatcgagtcacggcgcgagcagcgccgg
agctacgaggagcaactcgagaccgctcgcgaggagggcgacgaggtcgccatcgcgcaa
ctcgagtcccggacccagcggctgacgccgacgatccaggagaccagccgcgaactcctc
cgactgctcgacgtgccgatcgtcgaagcgccggcggagggtgaggcgcaggcggcccac
atggtccgccgcggcgacgccgactacgtggggtcggaggactacgacgccctcctgttc
ggcgctccgctgacgttgcgccagctaacgagcaagggcgaccccgaactgatggatctc
gaggcgacgctcgcccaccacgacctcacgctcgagcaactcatcgacgcggcgatcctc
atcgggacggacttcaacgagggcgtctcgggaatcggtcccaaaaccgccatcaaagcg
atcaccgaacacggtgacctctggagcgtcctcgaagcccgcggcgaccacgtcgagtac
ggcgaccgcgtccggcaactgttccgagaccccgacgtgaccgacgactacgagttcgag
acggatctcgacccggacctcgaggccgcccgggcgtacgtctgcgaggagtggagcgtc
gacgagggcgaagtcgaacgcggcttcgagcgcatcgaggagagcgtcacgcagacggga
ctggatcgctggacctga

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