Haloterrigena alkaliphila: J0X25_13560
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Entry
J0X25_13560 CDS
T07793
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
hakz
Haloterrigena alkaliphila
Brite
KEGG Orthology (KO) [BR:
hakz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hakz03036
]
J0X25_13560 (smc)
Chromosome and associated proteins [BR:
hakz03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
J0X25_13560 (smc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
CCDC39
AAA_21
CCDC18_2nd
AAA_23
Rod_CreS
AAA_15
AAA_29
DUF1664
SPC25_N
AAA_13
FKBP15
CEP135_TSGA10_CC
YGR130C_N
ATG16
PMD1-like
TMF_TATA_bd
SSNA1
Tropomyosin
ACBP4_C
DUF4795
DUF724
Fib_alpha
DUF3450
MscS_porin
CCDC89
DUF4407
ZapB_rel
EzrA
Fez1
ATG14
ATG17_like
CENP-F_leu_zip
Exonuc_VII_L
TPR_MLP1_2
Motif
Other DBs
NCBI-ProteinID:
QSW98418
UniProt:
A0A8A2VJP3
LinkDB
All DBs
Position
complement(2799139..2802729)
Genome browser
AA seq
1196 aa
AA seq
DB search
MYIKALVLDNFKSFGRKTKIPFYEDFTVITGPNGSGKSNIIDAVLFALGLARTRGIRAEK
LTDLIYNPGHEDGDASAGPREATVEVILDNADETLTRSQVVNAAGSDDVGDVDEIRIRRR
VKETEDNYYSYYYLNDRSVNLSDIQDLLAQAGVTPEGYNVVMQGDVTEIINMTPHDRRKI
IDEIAGVAEFDAKKEDAFEELEVVEERIDEAELRIEEKRDRLDQLADERREAMRYRRLRR
EKEEYEGYKKASELEEKRDELASAEEEADELADDLEELQRELDERQGAVVRLQEDLEDLN
AEIERKGEDEQLRIKSEIEEIKGEISRLEDKIEASEEAIEEAESNRREAFVQIDRKQEQI
DDLESEMRDHKLEKASIKSEIQERETERDELEAEIEAVDTEFDELKADLAERKEELEEAK
TERNDRQREQDRLLDEARRRSNEIDEKEATIEEKREEIPEIESQRSDLERELQKAEANRE
NIAGVVDDLKGEKRRLQSDVDELDDEIQAKQQEYAELEANAGESGDSSFGRAVTTILNAG
IGGVHGAVAQLGNVAGEYAVACETAAGGRLANVVVDDDVVGQQCIDHLKSRNAGRATFLP
LTDMSQRRLPNAPSDPGVVDFAYNLVDFDQEYAGVFSYVLGDTLVVEDLETARSYMGDYR
MVTLDGDLVEKSGAMTGGSGSGSRYSFTGGGEGQLERVAKQITELQEERESLREELRGVE
ERLDDARDRKTDAADEVRSIESELESLDERRESIEAEIESLEDDLEELEDERESVDERMT
EISGEIEEKTAAIEEIEADIEELERELADSKIPELTDQIEELEAEIDEREEKIADIDSKL
NELSLEKEYAEDAIEDLHDDIETAQNRTAEHEDKIEEYEEAIEGKRETLEEKREAVEDLE
DELAELKEERSDLKEELSDARTKRDQQQDRVNAVESKLEETRSRVSDLEWEIESLESEVG
DYDPEDVPDHETVLEMIEYLQADMEAMEPVNMLAIDEYDEVRSDLEELEDAKATLVEEAE
GIRDRIEQYETQKKQTFMDSYDEIAEQFTEIFEKLSEGTGTLHLEDEEDPFDGGLTMKAQ
PGDKPIQRLDAMSGGEKSLTALAFIFAIQRHNPAPFYALDEVDAFLDAVNADRIGEMVDE
LADEAQFVVVSHRSAMLDRSERAIGVTMQQDNVSAVTGIDLSDGADASGEEVPVSD
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcaaggcactcgttctggacaatttcaagagcttcggtcgcaagacgaagatc
ccgttctacgaggattttaccgtaatcaccggcccgaacggctcgggcaaatcgaacatc
atcgacgccgtcctcttcgcgctcggactggcccgcacccgcgggatccgcgcggagaag
ttgacggatctcatctacaaccccggtcacgaggacggcgacgcctccgccgggccgcgg
gaggccaccgtcgaggtcatcctggacaacgccgacgagaccctcacgcggtcgcaggtc
gtcaacgccgccggcagcgacgacgtcggcgacgtcgacgagatccgcattcgccggcgg
gtcaaggaaaccgaggataactactactcctactactacctgaacgaccggtcggtcaac
ctctcggacattcaggatctcctcgcgcaggcgggcgtcacgcccgaaggatacaacgtc
gtcatgcaaggcgacgtcacggagatcatcaacatgacgccccacgatcggcggaagatc
atcgacgagatcgcgggcgtcgccgagttcgacgcgaagaaggaggacgccttcgaggaa
ctcgaggtcgtcgaggaacgcatcgacgaagccgagttacggatcgaggagaagcgcgac
cgactcgaccagctcgcggacgaacggcgggaagccatgcgctaccgccgactgcgccgc
gagaaggaggagtacgaggggtacaagaaggccagcgaactcgaggagaagcgcgacgaa
ctcgcgagcgccgaggaggaggccgacgaactcgccgacgacctcgaggaactccagcgg
gaactcgacgagcgccagggcgcggtcgtccgcttacaggaggacctcgaggacttaaac
gccgagatcgagcgcaagggcgaggacgaacagctccggatcaaaagcgagatcgaggag
atcaagggcgagatttcgcgcctcgaggacaagatcgaggccagcgaggaggccatcgaa
gaggccgaatcgaaccgccgcgaggcgttcgtccagatcgaccgcaagcaggagcagatc
gacgacctcgagagcgagatgcgcgatcacaaactcgagaaggcctcgatcaagagcgag
attcaagagcgggagaccgagcgcgacgaactcgaggccgagatcgaggccgtcgacacc
gagttcgacgaactgaaggccgacctcgccgagcgcaaggaagaactcgaggaagccaag
acggagcggaacgaccgccagcgcgagcaggaccgcctgctcgacgaggcccgccgtcga
tcgaacgagatcgacgagaaggaggccaccatcgaggagaaacgcgaggagatccccgag
atcgagagccagcgaagcgacctcgagcgggaactccagaaggccgaagcgaaccgcgag
aacatcgcgggcgtcgtcgacgacctcaagggggagaagcgccgcctccagtcggacgtc
gacgagttggacgacgaaattcaggcgaaacaacaggagtacgccgaactcgaggccaac
gcgggcgagagcggcgactcctcgttcggccgcgcggtgacgacgatcctcaacgcgggg
atcggcggcgtccacggcgccgtggcacaactggggaacgtggccggcgagtacgccgtg
gcctgcgagaccgcggcggggggccgcctcgcgaacgtggtcgtcgacgacgacgtcgtc
ggccagcagtgtatcgaccacctcaaatcgcgcaacgcgggccgggcgacgttcctcccg
ctgacggacatgagccagcggcgactgcccaacgcgccgagcgatccgggcgtcgtcgac
ttcgcgtacaacctcgtcgacttcgaccaggagtacgccggcgtcttctcgtacgtgctc
ggcgacacgctcgtcgtcgaggacctcgagaccgcccgctcctacatgggcgactaccgc
atggtgacgctggacggcgacttagtcgagaagagcggcgcgatgaccggcggttccggt
agcgggtcgcgctactccttcaccggcggcggcgagggccaactcgagcgcgtcgccaag
cagatcaccgaactacaggaggaacgcgagtccctgcgggaggaactccgcggcgtcgag
gagcgcctcgacgacgcccgcgaccggaagaccgacgcggccgacgaggtgcgctcgatc
gagagcgaactcgagagtttagacgagcgccgcgagtcgatcgaggccgagatcgagtcc
ctcgaggacgacctcgaagaactcgaggacgagcgcgaatccgtcgacgagcggatgacc
gaaatctccggcgagatcgaggagaagacggccgcgatcgaggagatcgaggccgacatc
gaagaactcgaacgggaactcgccgactcgaagatccccgaactcaccgaccagatcgaa
gaactcgaggccgagatcgacgagcgcgaggagaagatcgccgatatcgatagcaagctc
aacgaactgagcctcgagaaggagtacgccgaggacgccatcgaggacctccacgacgac
atcgagacggcccagaaccggacggccgaacacgaggacaagatcgaggagtacgaggaa
gcgatcgagggcaagcgggagaccctcgaggagaagcgcgaggccgtcgaggacctcgaa
gacgaactcgccgaactcaaagaggagcgcagcgacctcaaggaggaactctcggacgcg
cggacgaaacgcgaccagcagcaggaccgggtcaacgccgtcgagagcaaactcgaggag
acccgcagccgcgtgagcgacctcgagtgggagatcgagagcctcgaatcggaggtcggc
gactacgaccccgaggacgtgcccgaccacgagaccgtcctcgagatgatcgagtacctg
caggcggacatggaggccatggagccggtcaacatgctcgcgatcgacgagtacgacgag
gtccgcagcgacctcgaggaactcgaggacgcgaaggcgacgctggtcgaggaagccgag
gggatccgcgaccggatcgaacagtacgagacccagaagaagcagacgttcatggactcc
tacgacgagatcgccgagcagttcaccgagatcttcgagaagctctcggaggggaccggg
acgctccacctcgaggacgaggaagatccgttcgacggcgggctgacgatgaaggcccag
ccgggcgacaagcccattcagcggctcgacgcgatgtcgggcggcgagaagtccctgacc
gcgctggccttcatcttcgccatccagcggcacaacccggcgccgttctacgccttagac
gaggtcgacgccttcctcgacgcggtcaacgccgaccgcatcggcgagatggtcgacgaa
ctcgccgacgaggcccagttcgtcgtcgtctcccaccgctcggcgatgctcgaccgctcc
gagcgagccatcggcgtcacgatgcaacaggacaacgtcagcgccgtcaccgggatcgac
ctgagcgacggcgccgatgccagtggtgaggaggtgccagtgagtgactag
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