Haloterrigena alkaliphila: J0X25_14345
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Entry
J0X25_14345 CDS
T07793
Name
(GenBank) DNA double-strand break repair ATPase Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hakz
Haloterrigena alkaliphila
Brite
KEGG Orthology (KO) [BR:
hakz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hakz03400
]
J0X25_14345
DNA repair and recombination proteins [BR:
hakz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J0X25_14345
Archaeal homologous recombinant proteins
J0X25_14345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_13
AAA_23
SMC_N
ABC_ATPase
AAA_21
AAA_15
AAA_29
AAA_27
ATG16
EzrA
COG6_N
CC149
EcoEI_R_C
Jnk-SapK_ap_N
NPV_P10
FapA
Knl1_RWD_C
DUF1664
ABC_tran
Viral_helicase1
AAA_16
NACHT
ZnF_RZ-type
MukB
Mating_N
AAA_33
Laminin_II
ATG17_like
DUF724
TPR_MLP1_2
CENP-F_leu_zip
Motif
Other DBs
NCBI-ProteinID:
QSW98562
UniProt:
A0A8A2VDV7
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Position
2949465..2952155
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AA seq
896 aa
AA seq
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MRVDRVRLMNFKCYGEADLGLERGVTVVHGVNGSGKSTLLEAVFFALYGSKALDERTLDD
VITTGEEDAEVELWFAHDGREYRVERRLKLRGDRATTTKCVLETPTETIEGARDVRREVT
ELLRMDAEAFVNCAYVRQGEVNKLIHASPGDRQDMIDDLLQLGALEEYRERASDARLGVK
TVLDGQREVLEDLRKQVEQKEEKDLHERLNELESRRADVNEEIDRFEDQREQARNTLETA
EDVLERHEETREEIDSLDEEIEDLRSKISETEREREAAKEEIRNLEERRDDLEAEREELL
AEVDLEGADATDAEDVDDRIETLEARDEDLRDDLENVRVAITETNGEIERLREEADDLEE
QAEQARADAADLESKLETDEEAIDDREESIEELDEQIETARERFDGAPIAFGDAADHLAD
LESEREELTDEIGDVTADVRTVENAIEEGERLLEEGKCPECGQPVEDSPHVDVLDEKRAE
LAELEERLEELEADRDDLAERIDRAEELREAERQVAQLEENRENVEQLLAEKRETLDERR
DQRERLLEEADEYEAEAATKREEADDLEDEVDDHRAELGEINTERGEIKEGLESLRRIAE
IDDERADLAGEIETRRERRRDWQTMNDERRETLSSKRERKRDLESEFDEERVETARNDKQ
NAEDYLEKVDAKLEELEEKRTEIQNDIGAAERELEELEELRDRLDELEERCERLESLYDE
AETLQATYADLRAELRQRNVETLERLLNETFDLVYQNDSYAGIDLDGEYRLTVYQKDGEA
LEPEQLSGGERALFNLSLRCAIYRLLAEGVEGSAPMPPLILDEPTVFLDSGHVTQLVSLI
QSMRNDFGVEQIVVVSHDEELVGAADSLIRVEKDATSNRSRLERGEPLEAELVVSD
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
gtgagggtcgaccgcgttcgcctgatgaacttcaagtgttacggcgaggctgatctcggc
ctcgagcgcggggtaaccgtcgtccacggcgtcaacggcagcgggaagtcgacgctgctc
gaggccgtcttcttcgcgctgtacggctcgaaagcgctggacgagcgcaccttagacgac
gtgatcacgaccggcgaggaggacgcggaggtcgaactctggttcgctcacgacggccgc
gaataccgcgtcgagcgccgactcaaactccgcggcgatcgggcgacgacgacgaagtgc
gtcctcgagacgccgacggagacgatcgagggcgcccgcgacgtgcgccgggaagtgacc
gaactcctgcggatggacgccgaggcgttcgtcaactgcgcgtacgtccggcagggcgag
gtcaacaagctgatccacgcctcgccgggcgatcgacaggacatgatcgacgacctcctg
caactcggggcgctcgaggagtaccgcgagcgcgccagcgacgcccggctgggcgtcaag
accgtcctcgacggccagcgggaggtcctcgaggacctccgcaaacaggtcgagcagaag
gaggagaaggacctccacgagcgcctcaacgaactggagtcgcgccgagccgacgtcaac
gaggagatcgaccgcttcgaggatcagcgcgaacaggcccgaaatacgctcgagaccgcc
gaggacgtcctcgagcgccacgaggagacgcgcgaggagatcgactcgctcgacgaggag
atcgaggacctgcgctcgaagatctccgagaccgaacgcgagcgtgaggccgcaaaagag
gagatccggaacctcgaggagagacgcgacgacctcgaggcagagcgcgaggagttactg
gccgaggtcgacctcgagggcgcggacgccaccgacgccgaggacgtcgacgaccggatc
gagaccctcgaggcccgcgacgaggacctccgggacgacctggagaacgttcgcgtcgcg
atcaccgagaccaacggcgagatcgaacgcctccgcgaggaggccgacgacctcgaggaa
caggccgagcaggcgcgggccgacgccgcggacctcgagtcgaaactcgagaccgacgag
gaggccattgacgaccgcgaggagagcatcgaggaactcgacgagcagatcgagacggca
cgcgagcggttcgacggggcgcctatcgcgttcggcgacgcggccgaccacctcgcagac
ctcgagtccgagcgcgaggaactgacggacgagatcggcgacgttaccgccgacgtcagg
accgtcgagaacgccatcgaggagggcgaacgcttgttggaggaggggaagtgccccgag
tgcgggcagccggtcgaggactcgccgcacgtcgacgtcctcgacgagaaacgggcggaa
ctcgcggagctcgaggaacgactcgaggaactggaggccgaccgcgacgacctcgcggag
cggatcgaccgcgccgaggaactccgcgaggccgagcggcaggtcgcgcaactcgaggag
aaccgcgagaacgtcgagcagttgctcgcggagaaacgcgagacgctcgacgagcgccgc
gaccagcgcgagcgcttgctcgaggaggccgacgagtacgaggcggaagccgcgaccaaa
cgcgaggaggccgacgacctcgaggacgaggtcgacgatcaccgggccgaactcggcgag
atcaacaccgagcgcggcgagatcaaggagggtctcgagtcgttacgccggatcgccgaa
atcgacgacgagcgcgcggacctcgccggcgagatcgagacccgtcgcgagcgccgccga
gactggcagacgatgaacgacgagcgccgcgagacgctctcgagcaaacgcgagcgcaag
cgcgacctcgagtcggagttcgacgaggagcgcgtcgagaccgcccggaacgacaagcag
aacgccgaggactacctcgagaaggtcgacgcgaaactcgaggaactcgaggaaaaacgc
accgagatccagaacgacatcggcgctgccgaacgggagctcgaggaactcgaggaactc
cgagaccgactcgacgaactcgaggagcgctgcgagcgcctcgagtcgctgtacgacgag
gccgagacgctgcaggcgacctacgcggacctgcgggcggaactgcgccagcgcaacgtc
gagaccctcgaacggctgctcaacgagacgttcgatctggtctatcagaacgactcctac
gcggggatcgatctagacggcgagtaccggttgacggtctaccagaaggacggcgaagcc
ctcgaaccggaacagctctcgggcggcgagcgggcgctgttcaacctcagcctgcgctgt
gcgatctaccggctgctcgccgagggcgtcgagggatcggccccgatgccgccgctgatc
ctcgacgagccgacggtcttcctcgactccggacacgtcacgcaactcgtctcgctgatc
caatcgatgcgcaacgacttcggcgtcgaacagatcgtcgtcgtcagccacgacgaggag
ctcgtcggtgcggccgactcgctgatccgcgtcgaaaaagacgccacgtcgaatcgctcc
cgcctcgagcgcggggagccgctcgaggccgaactggtcgtttccgactga
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