Haloterrigena alkaliphila: J0X25_17760
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Entry
J0X25_17760 CDS
T07793
Name
(GenBank) RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hakz
Haloterrigena alkaliphila
Brite
KEGG Orthology (KO) [BR:
hakz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hakz03016
]
J0X25_17760
Enzymes [BR:
hakz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
J0X25_17760
Transfer RNA biogenesis [BR:
hakz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J0X25_17760
Prokaryotic type
J0X25_17760
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
QSW99200
UniProt:
A0A8A2VER0
LinkDB
All DBs
Position
3631764..3632678
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AA seq
304 aa
AA seq
DB search
MSQRPRLRGPPDERTPAELLTFGVVTLDKPPGPSSHQVSGWLRDAVDETLAARDAGATID
RAAHAGTLDPKVTGCLPVMLGDATRLAQVFLEGPKEYVAVLECHGPVPGDVESVVAEFEG
PIYQKPPRKSAVARRLRVREIYDLEVLEAAERQVLLRIRCESGTYVRKLCHDLGLALGTG
GHMGHLRRTATAPFDDRELSSAYEFLDALAFWREDDDPDPLREVVAPAERILEGIPSVLI
AESAAREVANGAPVYAPGVLEVDDEASAGDLVACFTPNGAAVCLGEFVDDPKRDVVVDLE
RVLV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcgtcctcgcctccgcggcccgcccgacgagcgcacccccgcggaactgctc
accttcggcgtcgtcaccctcgacaagccccccggcccctcctcgcaccaggtcagcggc
tggttgcgcgacgccgtcgacgagacgctcgccgcccgcgacgcgggggcgacgatcgat
cgggcggcccacgccgggacgctcgaccccaaggtgaccggctgtctccccgtcatgctc
ggcgacgcgacgcgactcgcgcaggtcttcctcgagggtcccaaggagtacgtcgccgtc
ctcgagtgtcacggcccggtgcccggagacgtcgagtcggtcgtcgccgagttcgagggc
ccgatctaccagaaaccgccccgcaagagcgcggtggcgcgtcgcctccgcgtacgcgag
atctacgacctcgaggtcctcgaggcggccgagcggcaggtcctcctgcgcattcgctgc
gagagcggcacctacgtccgcaagctctgtcacgatctggggctggcactgggcacgggc
ggtcacatgggccacctacgccggaccgcgacggcgccgttcgacgaccgcgagctgtcc
tcggcttacgagttcctcgacgcgctggcgttctggcgcgaggacgacgatcccgacccg
ctccgcgaggtcgtcgcccccgccgaacggatcctcgaggggatcccgagcgtcctgatc
gccgagagcgccgcccgcgaggtcgcgaacggcgccccggtgtacgcgccgggcgtcctc
gaggtcgacgacgaggcgagcgccggcgacctcgtggcctgtttcacgcccaacggggcg
gcggtgtgtctcggcgagttcgtcgacgatccgaaacgtgacgtggtggtcgacctcgag
cgcgtgctggtctga
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integrated database retrieval system
