Haloterrigena alkaliphila: J0X25_17835
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Entry
J0X25_17835 CDS
T07793
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hakz
Haloterrigena alkaliphila
Brite
KEGG Orthology (KO) [BR:
hakz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hakz03032
]
J0X25_17835 (gyrB)
03400 DNA repair and recombination proteins [BR:
hakz03400
]
J0X25_17835 (gyrB)
Enzymes [BR:
hakz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
J0X25_17835 (gyrB)
DNA replication proteins [BR:
hakz03032
]
Prokaryotic type
DNA Topoisomerases
J0X25_17835 (gyrB)
DNA repair and recombination proteins [BR:
hakz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J0X25_17835 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QSW99214
UniProt:
A0A8A2VFP3
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Position
complement(3646822..3648753)
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AA seq
643 aa
AA seq
DB search
MSQESEYGAGQIQVLEGLEAVRKRPAMYIGSTDSRGLHHLVYEVVDNSIDEALAGYCDDI
TVTIHEDGSVGVADDGRGIPVDTHDEYDRPALEVILTVLHAGGKFDNKSYQVSGGLHGVG
VSVVNALSERLEAEVKRDGGVFRHAFEEGEPVGDMERVRDMDDDEETGTQVRFWPDTGIF
EGDEFSFSTLSNRLRELAFLNSGVRITLRDEREADDEGEFVEDTYEYEGGIREFVDYLNE
TRSAMHDDVIYFEDEEQNIQIEVAMQATEELQGSIHAFANNINTREGGTHLTGFKTALTR
TVNDYAKDNDMLDDLENNLKGEDIREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVES
AMHEGLGTYFEEHPDTAQAIVMKAVEAAKARKAAQKAEELTRRKSALESTSLPGKLADCQ
TKDPDEAELFIAEGDSAGGSAKQARNPDFQAILPIKGKILNVEKHRLDRILENDEIRNMI
TAIGAGIGDEFDIEDVRYKKIIMATDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQP
PLYRIRYRGETYDAMTEAERDEIVEEQCDGNPTQVQRFKGLGEMNPQQLWDTTMDPENRI
LKQITIEDAAAADKMFSVLMGDAVEPRKQFIKDHAPEAEWIDI
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaggaaagcgagtacggcgccggacagattcaggtcctagagggcctggaggct
gtgcgaaagcgaccggcgatgtacatcggctctacggattctcgaggacttcatcacctg
gtctacgaggtggtggacaactcgatcgacgaggcactggccggctactgcgacgatatc
accgtcacgatccacgaggacgggtcggtgggcgtcgcggacgacggccgtggcatcccc
gtcgatacgcacgacgagtacgaccgccccgcactcgaggtcattctgacggtcctccac
gccggcggcaagttcgacaacaagtcctaccaggtctccggcggcctccacggcgtcggc
gtctcggtcgtcaacgccctctccgagcgactcgaggccgaggtcaaacgcgacggtggc
gtcttccgccacgcgttcgaggagggcgaacccgtcggcgatatggaacgggttcgcgat
atggacgacgacgaggagaccgggacgcaggtccggttctggccagataccggcatcttc
gagggcgacgagttctccttctcgacgctctcgaaccggctccgggaactggccttcctc
aactcgggcgttcgcatcacgctgcgcgacgagcgcgaggcggacgacgagggcgaattc
gtcgaagatacgtacgagtacgagggcggcatccgcgagttcgtcgactacctcaacgag
acgcgctcggcgatgcacgacgacgtcatctacttcgaggacgaggagcagaacatccag
atcgaggtcgcgatgcaggccaccgaggaactgcagggctcgatccacgccttcgcgaac
aacatcaacacccgcgagggcgggacccacctcaccgggttcaagaccgcgctgacgcgg
acggtcaacgactacgcgaaggacaacgacatgctcgacgacctcgagaacaacctcaag
ggcgaggacatccgcgagggccttactgcggtcatctcggtcaaacacccggacccgcag
ttcgagggccagacgaagacgaaactcgggaactcggaagttcggggaatcgtcgagagc
gcgatgcacgaggggctcggaacctacttcgaggaacaccccgacactgcccaggcgatc
gtgatgaaggccgtcgaggccgcgaaggcccgcaaggccgcccagaaggccgaggagctg
acccggcggaagtccgccctcgagtccacgtcgctgccgggcaaactcgcggactgccag
accaaggatcccgacgaggccgaactgttcatcgcggagggtgactccgcgggcggcagc
gcgaagcaggctcggaatccggatttccaggcgatcctccccatcaaggggaagatcctg
aacgtcgaaaagcatcggctggaccggatcctcgagaacgacgagatccggaacatgatc
accgccatcggcgcggggatcggcgacgagttcgacatcgaggacgtccgctacaagaag
atcatcatggcgaccgacgccgacgtcgacggcgcccacatccggaccctcctgttgacg
ttcttctaccgacacatgcgtccgctgctcgagggtgggtacgtctacgcgacccagccg
ccgctctaccggattcgctaccgcggggagacctacgacgcgatgacggaggccgaacgc
gacgagatcgtcgaagagcagtgcgacggcaatccgacgcaggtccagcggttcaaggga
ctgggcgagatgaacccccaacagctctgggacacgacgatggaccccgagaaccgcatc
ctcaagcagatcacgatcgaggacgcggccgcggcggacaagatgttctccgtcctgatg
ggcgacgccgtcgaaccgcgcaagcagttcatcaaggaccacgcgccggaggccgaatgg
atcgacatttga
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