Haloterrigena alkaliphila: J0X25_19715
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Entry
J0X25_19715 CDS
T07793
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hakz
Haloterrigena alkaliphila
Pathway
hakz03420
Nucleotide excision repair
hakz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hakz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J0X25_19715
03430 Mismatch repair
J0X25_19715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hakz03400
]
J0X25_19715
Enzymes [BR:
hakz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J0X25_19715
DNA repair and recombination proteins [BR:
hakz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J0X25_19715
MMR (mismatch excision repair)
Other MMR factors
J0X25_19715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
ACP_syn_III_C
Motif
Other DBs
NCBI-ProteinID:
UHQ95085
LinkDB
All DBs
Position
unnamed1:complement(186887..189766)
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AA seq
959 aa
AA seq
DB search
MTTPTEERSADEPPSPNDRQRELIESTDGLYLVDAGAGTGKTFTVTRRYANIVAQPDVEP
DDILLITFTRNAATEMKDRIVAECDYDMRALNDAPIQTFHSLCNDILDQHGFHAPSYLGI
DDAITGSTRILENETIEGEYFQEFVDRFSDDHDEYADLLRCLSDPTELLDLLNNLASKGI
FPTDDGWYRDGRDALEGDFEAFKETFDEVNRPRNGGSKQSTLRERLGGYGRNKCYLPDAP
DRSELRGEYGSKAVPAEIAKRVFTEDRNHLIEFVHDIYFEYLEFALGRNYLNFSFLQLFA
FVLCCEDGDLRGDLAFEYVMIDEFQDSSEIQFKLALLLAGIDNVCVVGDWKQSIYSFQYA
AIENITEFESRLKRFAGELNDDADRISFPLEPVTTIELDRNYRSTQSILDFSEHALVTPG
SSNESVDRESVLEDVVSLTAHTDRDHSRIEAVQHADEHEAILTKIQEIVGNDEYAVEDDG
ELRPPTYGDIAVLTRTRDFGRELLSTAEAYEFPMAYEGGIELFRTDQAKLLLAWLRILED
DADADRGWAVVLERAGYTLDEIEYVLDHDAYPDEMDAFRTELSTLETHTAVTRRVFDRYG
YDGTTADVVLTTIQSIHESTTMTRGDLVRIIERGVENGYTEEVQAAAGADSVIVQTIHSV
KGLEYPIVILGNMNSGKFPPGGGSAGTITYSETTGLRQRKCYADAHGDPHVYDNWRADVL
RKCRPTEHDEERRLLYVAMTRAENHLLFAGGDEPNTFLEELPVDVELLEPAISAVDIDEE
SHTQLNVNVPDPAGPDGYSPHSLMDDSIFEDVSDGRGKDFGSQVHEFAEDYALGKDVTPG
SDDEEHIEAFLDSLPGELRVEERAYLPLEVDGERITLSGIIDLVHVTDEVVEIVDFKTDL
SRHAESQFRIQLSVYYHVLEEWFSDRPVTVSIFYTAEDDRVEISPLSKAELVAVANKRS
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgccgacagaagagcggtcagcagacgagccgccgtcgccgaacgatcggcag
cgggaactcatcgagagcacggacggactgtatctcgtcgatgccggcgccgggaccggc
aagacgttcacagtgacccggcgctacgcgaatatcgtcgcccagcccgacgtcgagccc
gacgatatcctcctgatcacgttcacgcgcaacgcggcgacggagatgaaagaccgaatc
gtcgcggagtgtgactacgatatgcgggcgctcaacgacgcgccgattcagacgttccac
agtctgtgtaacgacatcctcgatcagcacggcttccacgcgccgtcctatctcgggatc
gacgacgcgatcaccggctcgacgcggatcctcgagaacgagaccatcgaaggggagtac
ttccaagagttcgtcgatcgattcagcgacgaccacgacgagtacgccgacctcctccgg
tgtctctccgatccgacggaactgctcgacctgctcaacaacctcgcgtcgaaagggatc
tttccgaccgacgacggctggtatcgtgacggcagagacgccctcgagggcgacttcgag
gcgttcaaggagacgttcgacgaggtgaatcggccgcgaaacggcggcagcaagcagtcg
acgctccgcgagcggctcggtggctacggcagaaacaagtgctacctgccggatgctccc
gatcgaagcgaactccgcggtgagtacggctcgaaggctgtcccagcggagatcgcaaaa
cgggtcttcaccgaagaccgcaaccaccttatcgagttcgtccacgacatctacttcgag
tatctcgagttcgcactcggacggaactacctgaacttctcgttcctccagctgttcgcg
ttcgtcctgtgctgtgaggacggcgatctccgcggggacctcgcgttcgagtacgtgatg
atcgacgagttccaggactcgagcgagatccagttcaaactcgcattgcttctggctggg
attgacaacgtctgcgtcgtcggcgactggaaacagagcatctactcgttccagtacgca
gcgatcgagaacatcaccgagttcgagtcccggctgaagcggttcgccggcgaactgaac
gacgacgccgatcggatctcgttcccgctcgagcccgtgacgacgatcgaactcgaccgg
aattatcgctcgacgcaatcgatcctggacttctccgagcacgcgctcgtgacaccgggc
agcagcaacgagtcggtcgatcgagagtcggtcctcgaagacgtcgtgtcgctaaccgca
cacactgaccgcgatcactcgcggatcgaggccgttcagcacgccgacgagcacgaggcg
atcctcacgaagatccaggagatcgtcggcaacgacgagtacgcggttgaagacgacggt
gagttgcggccaccgacgtacggcgatatcgctgtcctcacccgaacccgtgatttcggc
cgcgagttgctctccactgccgaggcatacgagttcccgatggcctacgaaggcgggatc
gaactctttcgaaccgatcaggcgaagctgttgctggcgtggctgcgcatcctcgaggac
gatgcggatgccgaccggggctgggcagtcgtgctcgaacgggccggctatacgctcgac
gagatcgagtacgtcctcgatcacgacgcctatcctgacgagatggacgcgtttcgcacc
gaactgtcgacgctcgagacccacacggcggtcactcgccgcgtgttcgatcggtacggc
tacgacgggacgacggcggacgtcgtcctcacgacgatccagtcgatccacgagtcgacg
acgatgacgcgtggcgacctggttcggatcatcgaacggggtgtcgagaatggctacact
gaagaggtgcaggccgccgcaggtgctgattcagttatcgtccagacgattcactcggtc
aaaggactcgagtatccgatcgtgatcctcgggaacatgaacagcggcaagttcccgccc
ggtggcggctccgcgggcacgatcacgtactccgaaacgacggggcttcgccagcggaag
tgctacgccgacgcccacggtgacccccacgtctacgacaactggcgagccgacgtcctc
cgcaagtgccggccgaccgagcacgacgaggaacggcgcctgctctacgtcgcgatgacg
cgggcggaaaaccacctcctgttcgcaggaggcgacgaaccgaataccttcctcgaggag
ttgccggtcgatgtcgaattactcgagccggccatttcggcagtcgatatcgatgaggaa
agtcatacgcaactcaatgtcaacgttcccgatccagcgggaccggacgggtactcgcca
cactcgctgatggacgacagtatcttcgaggatgtttcggacggaagagggaaggatttc
ggctcacaggtccacgagttcgccgaggactacgcgctcggcaaggacgtgactcctggg
agtgacgacgaagaacacatcgaagcgttcctcgacagtctgccgggagagctgcgcgtc
gaagagcgagcgtacctcccgcttgaggtcgacggtgaacggatcacgctctccgggatt
atcgacctggttcacgtgaccgacgaagtggtcgagatcgtcgacttcaaaacggatctc
agtcggcatgccgagtcccagtttcgaatccagctcagcgtctactatcacgtcctcgaa
gaatggttcagtgatcgtcccgtcactgtatcgatcttctatacggccgaagacgatcga
gtcgagatcagtcccttgtcgaaagcagagctcgtagcggtggctaacaaacggtcatag
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integrated database retrieval system
