Haloterrigena alkaliphila: J0X25_19840
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Entry
J0X25_19840 CDS
T07793
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
hakz
Haloterrigena alkaliphila
Pathway
hakz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hakz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
J0X25_19840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hakz03000
]
J0X25_19840
03021 Transcription machinery [BR:
hakz03021
]
J0X25_19840
Transcription factors [BR:
hakz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
J0X25_19840
Transcription machinery [BR:
hakz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
J0X25_19840
RNA polymerase III system
TFIIIB
J0X25_19840
RNA polymerase I system
SL1/TIF-1B
J0X25_19840
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
DUF192
Motif
Other DBs
NCBI-ProteinID:
UHQ95108
LinkDB
All DBs
Position
unnamed1:complement(219629..220189)
Genome browser
AA seq
186 aa
AA seq
DB search
MADPKDSINIENVVASTSIGQELDLQSVAMDLEGADYDPEQFPGLVYRTKNPKSAALIFR
SGKIVCTGAKSIDAVHESLEIVFDKLRNLQIQVEDDPEIVVQNIVSSADLGRNLNLNAIA
IGLGLENIEYEPEQFPGLVYRLDDPEVVALLFGSGKLVVTGGKQVEDAEEAVDVIVDRLE
DLGLLE
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccaaaggactccatcaacatcgaaaacgtggtggcgtcgaccagtatcggg
caggaactcgaccttcagagcgtcgcgatggacctcgagggggccgactacgatcccgag
cagttccctgggctcgtctaccgcaccaagaatcccaagtctgccgcgttgatcttccgg
tcggggaagatcgtctgtaccggcgccaagagcattgacgccgtccacgagagcctggag
atcgtcttcgacaaactccgtaacctccagattcaggtcgaggacgatccagaaatcgtc
gtccagaacatcgtcagcagcgccgacctggggcggaacctcaacctgaacgcgattgcg
atcggtctcggtctcgagaacatcgagtacgaacccgagcagtttcccgggctcgtttac
cgcctcgatgaccccgaggtcgtcgcccttctctttggctccgggaagctggtcgtgacc
ggcggaaagcaggtcgaagacgccgaggaagccgtcgacgtaatcgttgaccgcctcgag
gatctcgggttgctcgagtaa
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