Haloterrigena alkaliphila: J0X25_20275
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Entry
J0X25_20275 CDS
T07793
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
hakz
Haloterrigena alkaliphila
Pathway
hakz03022
Basal transcription factors
hakz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hakz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
J0X25_20275
09124 Replication and repair
03420 Nucleotide excision repair
J0X25_20275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hakz03021
]
J0X25_20275
03400 DNA repair and recombination proteins [BR:
hakz03400
]
J0X25_20275
Enzymes [BR:
hakz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J0X25_20275
Transcription machinery [BR:
hakz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
J0X25_20275
DNA repair and recombination proteins [BR:
hakz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
J0X25_20275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_30
AAA_22
AAA_25
TrmB
AAA_33
AAA
Motif
Other DBs
NCBI-ProteinID:
UHQ95445
LinkDB
All DBs
Position
unnamed2:complement(1831..3708)
Genome browser
AA seq
625 aa
AA seq
DB search
MTLSEFHDACQEAGRPVLTAAAVARALETAHETAREALEGLAERGDVERLAVETDPVVWY
PSELEDLTDRERVVVFPKRREIVVDRPDQFTRAQLAQFAHLADANGEQGYRYVVRPEDVW
QAPHDSFEKLARTMRQALGQRSEGLEEWVHSQWDRAHQFRLTTHEEGYTVLEAKSPEVMG
NVARQKLDEEHVHAPISDTEDWVREGSEAAIKRILYEAGYPVQDHRDLESGEDLPIDLAV
RLRDYQRTWVDRFAEAGEGVFVGPPGSGKTVAAMGAMAHVGGETLILVPSRDLARQWADA
ILEYTSLEADQIGQYHGGRKEVRPVTIATYQIAGMDRHRSLFDDREWGLVVFDECQHVPS
DVYRRSTHLQSRHRLGLSASPIREDDRQTEIFTLVGPPIGTDWEALFEAGFVAEPELEIR
YVPWGDDEQPNAYASAEGQEKYRIAAKNRGKVDEVRYLLSAHPDSRALVFVDYLEQGRDL
SAALDTPFLSGETPHHERRRLLDEFRRNERDLLIVSRVGDEGIDLPTADLAIVASGLGGS
RRQGTQRAGRTMRPAGGALVYVLATRGTREEDFARKQLQHLGRKGMTIREQTIERAGADS
DSEDGEEGDANGEGNNNADSVENAE
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgacgctctcggagttccacgacgcgtgccaggaggccggccgacccgtgctcaccgcg
gcggccgtcgcccgcgccctcgagaccgcgcacgagacggcccgcgaggcactcgagggc
ctcgcagaacggggtgacgtcgagcgactcgccgtcgaaacggatcccgtcgtctggtat
cccagcgaactcgaggacctcaccgaccgcgagcgagtcgtcgtcttcccgaagcgccgc
gaaatcgtcgtcgaccgaccggatcagttcacgcgcgcccaactcgcccagttcgctcac
ctcgcggacgccaacggcgagcagggataccggtacgtcgtcagacccgaggacgtctgg
caggccccccacgactccttcgagaaactcgcccggacgatgcgacaggcgctcgggcag
cgctccgaggggctcgaggagtgggtccacagccagtgggaccgtgctcaccagttccgg
ctgaccacccacgaggaggggtacaccgtcctcgaggcgaagagtccggaagtcatgggc
aacgtcgcgcgccagaaactcgacgaggaacacgtccacgcgccgatatcggacaccgaa
gactgggttcgcgaggggtcagaggcggcgatcaagcgcatcctctacgaggcggggtac
ccggtccaggaccaccgcgacctcgagtccggcgaggacctgcccatcgacctcgcggtt
cgcctgcgcgactaccagcgaacgtgggtcgatcgcttcgcggaggccggggagggcgtc
ttcgtcggcccgccgggcagcggaaagaccgtcgccgcgatgggggcgatggcccacgtc
ggcggcgagaccctgatactggttccgagtcgcgatctggctcgccagtgggccgacgcc
atcctcgagtacacctcgctcgaggccgaccagatcgggcagtaccacggcggccgcaag
gaagtccgcccggtgacgatcgcgacctaccagatcgcgggaatggaccgccaccgctcg
ctgttcgacgaccgcgagtggggactggtggtcttcgacgagtgccagcacgttccctcg
gacgtctaccgccggagtacgcacctgcaatcgcgccaccgactgggactgtcggccagc
cccatccgggaggacgaccgccagacggagatcttcaccctcgtcggcccgccgatcggc
accgactgggaggcgctgttcgaggccggcttcgtcgccgagccggaactcgagatccgg
tacgtcccgtggggcgacgacgagcagccgaacgcctacgcgtccgccgagggccaggag
aagtaccggatcgccgcgaagaatcgcggaaaggtcgacgaggtccgctacctgctgtcg
gcccaccccgactcgagagcgctggtcttcgtcgactacctcgagcaggggcgggacctc
tcggccgccctcgacactcccttcctcagcggcgagacgccccaccacgagcgccggcgg
ctgctcgacgagttccggcggaacgaacgcgacctgttgatcgtctcgcgggtcggcgac
gagggtatcgacctcccgacggccgatctggcgatcgtcgcgtccggactcggcggctcg
cggcgacagggaacccagcgagcgggtcggacgatgcgccccgctggcggcgcgctggtg
tacgtgctcgcgacgcggggcacgcgcgaggaagacttcgcccggaaacagctccagcac
cttggccgaaaggggatgacgatccgcgagcagaccatcgagcgagccggtgctgatagc
gatagcgaagacggcgaggagggtgacgctaacggagagggaaacaacaacgctgattcg
gtcgagaacgccgaatag
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