KEGG   Haloterrigena alkaliphila: J0X25_20830
Entry
J0X25_20830       CDS       T07793                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
hakz  Haloterrigena alkaliphila
Brite
KEGG Orthology (KO) [BR:hakz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hakz03400]
    J0X25_20830
Enzymes [BR:hakz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     J0X25_20830
    5.6.2.6  RNA 3'-5' helicase
     J0X25_20830
DNA repair and recombination proteins [BR:hakz03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    J0X25_20830
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C WHD_Lhr ResIII AAA_25 Zn_ribbon_Thio2
Other DBs
NCBI-ProteinID: UHQ95316
LinkDB
Position
unnamed2:108118..110958
AA seq 946 aa
MSEGDVAAFTHLGPTIRGALSERGFSTPTAPQQAAIPPLSAGRHTLVIAPTGSGKTETAM
LPVFDHLVADEGPPEGFGALYVTPLRALNRDMRERLEWWGDYLDLAVDVRHGDTTQYQRG
KQAEDPPDVLVTTPETLQAMLTGERLREALQDVSHVVIDEVHELAASKRGAQLAIGLERL
HDLAGDMQRIGLSATVGDPGEVGQFLTGGRPCTIREIDVGGNVDVAVRQPEITDDDERLA
GELMTEPDTASHVRLIRDLVAANESTLIFVNTRQTAEALGSRFNELDLPIGVHHGSLSKE
ARIEVEDRFKTGELDGLLCTSSMELGIDVGRVDHVVQYKSPRQVTRLLQRIGRAGHRQDE
VSSGTIVTTRPDDTFEALAIARRARDGEVEPAAIHEGSLDVVANQIPGIVQSRGDTRFRE
AYETITRAYPFRDVPEETVREIVSELHRNRIVWFDEGEDRIETTGGTWQYVYSNLSMIPD
EETYEVHDIASGTRIGTLDERFVVNFAQPGEIFIQRGEMWRIAEIDDEEARVKVSPIEDP
AGEVPSWIGQEIPVPAPVAGEVGEIRGVAEPQLSAGADAAAVGRELAHRYPGDEYTLTEA
CEQLERQVDAGAPMPTADRLVLERQGRTVVLNAPFGHTINETLGRILSSLLGQQAGSSVG
LETDPYRIELEVPNSIATSDIVGVLEETDPDHVEAIVELGLKNSDALAFRLAQVSAKFGA
LKRWQGDGSGRLSNDRLLAALEDTPMYAESIREVFHEDLDVEGASAVLEGIQSDEIDLVT
YRGRTPVGQGGRSSGGKELLAPENADASVINTVRERIQNDRIILLCTHCKEWKAKTKVGR
VAEQPKCGNCGSTRIAALNPWADEVVQAVRAAEKDEDQEKMTERAYRSASLVQSHGKQAV
IAMAARGVGPHNAAQIINRLREDEDEFYRDILSKEREYARTQSFWD
NT seq 2841 nt   +upstreamnt  +downstreamnt
atgagtgagggggacgtcgcggcgtttacgcacctcggaccgacgatccgcggggcgctc
tccgagcggggcttctcgacgccgaccgcaccgcagcaggcggcgatcccgccgctgtcg
gccggccggcacacgctcgtgatcgcacccaccgggagcggcaagaccgagacggcgatg
ttgccggttttcgatcatctcgtagctgatgagggcccaccggaggggttcggcgccctc
tacgtcaccccgctgcgggcgctcaaccgggatatgcgcgagcgcctcgagtggtggggc
gactacctcgacctcgcggtcgacgtccgccacggcgacacgacccagtaccagcgcggg
aagcaggccgaggatccgccggacgtgctggtcacgacccccgaaaccctgcaggcgatg
ctcaccggcgagcgtctgcgcgaggcgctacaggacgtctcccacgtcgtgatcgacgag
gtccacgagctcgcggcctccaagcggggggcgcagctggcgatcggcctcgagcgcctc
cacgacctcgcgggcgacatgcagcggatcggcctctcagccaccgtgggggatccgggg
gaggtcggccagtttttgaccggcgggcgcccctgcacgattcgggagatcgacgtcggc
ggcaacgtcgacgtggcggttcgccagcccgagatcacggacgacgacgagcgactcgcg
ggcgaactgatgaccgaaccggacacggccagtcacgtccggctgattcgggatctcgtc
gccgcaaacgagtcgacgctgatattcgtcaacacgcgccagactgcggaggcgctgggc
tcccgattcaacgaactggacctcccgatcggggtccaccacggctcgctgtcgaaggag
gcccggatcgaggtcgaggaccgattcaaaacgggggagctggacggcctgctctgtacc
tcctcgatggagctggggatcgacgtcggccgggtcgaccacgtcgtccagtacaagagc
ccccggcaggtgacgcggctgctccagcggatcgggcgggccggacaccgccaggacgag
gtttccagtgggaccatcgtcacgacccgtccggacgacaccttcgaggcgctggcgatc
gcccggcgggcccgcgacggcgaggtcgaaccggccgcgatccacgagggcagcctcgac
gtcgtcgccaaccaaattccgggaatcgtccagagccgcggcgatacccggttccgcgag
gcctacgagaccatcacgcgcgcgtaccccttccgggacgttccggaggagacggtccgc
gagatcgtctcggaactgcaccgcaaccggatcgtctggttcgacgagggcgaggaccgg
atcgagacgaccggcggcacctggcagtacgtctactcgaacctctcgatgatccccgac
gaggagacctacgaggtccacgacatcgcctcggggacccggatcgggaccctggacgag
cggttcgtggtcaacttcgcccagcccggcgagatcttcatccagcgcggcgagatgtgg
cgcatcgccgagatcgacgacgaggaggcccgcgtgaaggtcagcccgatcgaggacccc
gcgggcgaggttccctcttggatcggccaggagatccccgtccccgcgccggtcgcgggc
gaggtcggcgagatccgcggggtcgcggaaccgcagttgtccgcgggcgcggacgccgcc
gcggtcggccgggaactggcgcatcggtatccgggcgacgagtacacgctgaccgaggcc
tgcgagcaactcgagcggcaggtcgacgcgggggcgcctatgcccaccgcggaccgactc
gtcctcgagcgacagggtcggaccgtcgtcctcaacgcgcccttcggccacacgatcaac
gagacgctcggccgcatcctgtcgtcgctgctcggccagcaggccggctcctcggtcggc
ctcgagaccgatccctaccggatcgaactcgaggtgccgaactcgatcgcgaccagcgac
atcgtgggggtgctcgaggagaccgacccggaccacgtcgaggccatcgtcgaactcggg
ctgaagaactccgacgcgctcgccttccgcctcgcgcaggtctcggcgaagttcggcgcg
ctcaagcgctggcagggcgacggctcgggacggctctcgaacgaccgcctgctcgcggcg
ctcgaggacaccccgatgtacgcggagtcgatccgcgaggtgttccacgaggatctcgac
gtcgagggcgcgagcgcggtcctcgaggggatccagtcggacgagatcgacctcgtaacg
tatcggggccggacgccggtcggacagggcggccgctcgtcgggcgggaaggaactgctg
gcgcccgagaacgcggacgcgagcgtcatcaacacggtccgggagcggatccagaacgac
cggatcatcctgctgtgtacccactgcaaggagtggaaggcgaagacgaaggtcgggcgc
gtggcggagcagccgaagtgtggaaactgcgggtcgacgcggatcgcggcgctgaacccg
tgggccgacgaggtcgtgcaggcggtccgcgccgcggagaaagacgaggaccaggagaag
atgaccgaacgcgcctaccgcagcgccagtctggttcagagccacggcaagcaagccgtg
atcgcgatggccgcccgcggggtcggaccgcacaacgccgcccagatcatcaacaggctc
cgggaggacgaggacgagttctaccgcgacatcctctcgaaggaacgcgagtacgcgcgc
acgcagtcgttctgggactga

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