Halobacterium salinarum NRC-1: VNG_0243C
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Entry
VNG_0243C CDS
T00038
Name
(GenBank) conserved hypothetical protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hal
Halobacterium salinarum NRC-1
Brite
KEGG Orthology (KO) [BR:
hal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hal03016
]
VNG_0243C
Enzymes [BR:
hal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
VNG_0243C
Transfer RNA biogenesis [BR:
hal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VNG_0243C
Prokaryotic type
VNG_0243C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Rrn6_HB
Motif
Other DBs
NCBI-ProteinID:
AAG18841
UniProt:
Q9HSG5
LinkDB
All DBs
Position
complement(198651..200378)
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AA seq
575 aa
AA seq
DB search
MPNAAGWTDVVVSAASSQGYAGAGRPSGHETGHRRPHGHRNGAGKARRAGRPRLAERLRV
HRRSRRPPVERRGADESRGESRQRARALRALRGSQTRRAAHGAHLGRRPHPTGAGDADGA
RHRARARRRRRPDHGRPLAVLMREAHPIERAVGMAYYASDSDGTGGRLRDSPADFRVREL
EAFDTQPADAPTGDYPWLVVRATLHEWDTNDFARELANTVGMSRERVRWAGTKDRHAVTT
QLFAVRDLDAAQVPEIRNADIEVVGRAGRGLEFGDLAGNAFEIVVRDPDAPERAAAVADE
LAAFGGGTVGTPNYFGQQRFGSKRPVTHEVGLAILRDDWEAAAMAYLGAPTEHEPADSQR
AREYVAETRDWTGALAEFPQRLRYERTMLHELADGGSFRDAVETFPSNLQQLFVHAAQSY
VFNRIVSERMARGLPFGEPVAGDVVWFADSDADAAVAQPDAARQQRVTDSRVDVMARHCE
RGRAFVTAPLVGTDTEFADGDPGEITRGVLDDLGLSRADFDLPGEFDSAGSRRAILLRPD
LTVSHDPLAFEFALPSGSYATVVLREFLKPSPLAL
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgccgaatgctgcagggtggaccgacgtagtggtttcggccgcgagtagccagggctat
gccggagccggccgtccgtccggccatgaaacaggtcatcgccgcccgcacggacatcgg
aatggggcagggaaagctcgccgcgcaggtcgcccacgcctcgctgaacgcctacgagta
caccgacgatcgcgccgtccgccggtggaaagacgaggggcagacgaaagtcgtggtgaa
agtcggcagcgagcgcgagctctacgagcgctccgaggaagccaaacgcgccgggctgcc
cacggggctcatctcggacgccggccgcacccaactggagccggggacgccgacggcgct
cgccatcgggcccgcgcccgacgccgacgtcgaccagatcacgggcgacctctcgctgtt
ctgatgcgcgaggcacaccccatcgagcgcgccgtcgggatggcgtactacgcgagcgac
agcgacggcactggcggccggctgcgggactccccggcggacttccgcgtgcgcgaactc
gaagcgttcgacacccagccggcggacgcgccgaccggcgactacccgtggctcgtggtg
cgtgcgaccctccacgagtgggacaccaacgacttcgcccgcgaactcgccaacaccgtc
gggatgagccgcgagcgcgtgcggtgggcgggcaccaaggaccgccacgcggtcaccact
cagctgttcgccgtccgcgatctggacgccgcccaggtgccggagatccggaacgccgac
atcgaggtcgtcgggcgggcgggccgcggcctggagttcggggatctcgccggcaacgcc
ttcgagatcgtggtgcgggaccccgacgcccccgagcgggccgccgccgtcgccgacgag
ttggcggcgttcggcggcggaaccgtcggcacgcccaactacttcggccaacagcgcttc
gggagcaagcgcccggtcacccacgaggtcgggctcgccatcctgcgcgacgactgggag
gcggccgccatggcgtacctgggcgcgcccaccgagcacgaacccgcggactcccagcgc
gcccgcgagtacgtcgcggaaacgcgggactggacgggcgcgctcgcggagttcccacag
cgcctgcgctacgagcgcaccatgctgcacgagctggccgacggcgggagcttccgggac
gccgtcgagacgttcccgtcgaacctccagcagctgttcgtgcacgccgcccagtcgtac
gtcttcaaccgaatcgtctcggagcgcatggcgcgcgggctgccgttcggcgagccggtc
gcgggcgacgtggtgtggttcgcggacagcgacgccgacgccgccgtcgcccagcccgac
gccgcacgccagcagcgggtcaccgactcccgggtggacgtgatggcgcggcactgcgag
cgcggccgcgcgttcgtcaccgcgccgctcgtcggcaccgacaccgagttcgcggacggc
gaccccggggagatcactcggggcgtcctcgacgacctcggcctttcgcgcgcggatttc
gacctgcccggcgagttcgactcggcgggcagtcgccgcgcgatactcctccggccggat
ctcacggtcagtcacgacccgctggccttcgagttcgcgctgccctccggcagctacgcc
acggtcgtcctgcgggagttcctgaaacccagcccgctggccctctga
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