Halobacterium salinarum NRC-1: VNG_0401G
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Entry
VNG_0401G CDS
T00038
Symbol
epf2
Name
(GenBank) mRNA 3'-end processing factor homolog
KO
K07041
uncharacterized protein
Organism
hal
Halobacterium salinarum NRC-1
Brite
KEGG Orthology (KO) [BR:
hal00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
VNG_0401G (epf2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-Casp
KH_TffA
RMMBL
Lactamase_B
Lactamase_B_6
Lactamase_B_2
KH_2
Lactamase_B_3
KH_1
Anti-Pycsar_Apyc1
Glyco_hydro_31_2nd
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AAG18954
UniProt:
Q9HS54
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All DBs
Position
complement(307290..309215)
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AA seq
641 aa
AA seq
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MSTVDRQLEELQDEIVSEIPADISVTDVKYEGPELVVYTRDPKQFAQDGDLVRRLASKLR
KRITVRPDPAVLSSPKRARDRVLDVIPEEAGVTNLDFHEDTGEVVIEAEKPGMVIGRHGS
TLREITQEAGWTPEVVRTPPIESSTVSNVRNFLKQERDERRDILETVGRQIHREEMQDDE
YVRVTTLGCCREVGRASFVLSTPETRILVDCGDKPGSEDEVPYLQVQEALAGGANTIDAV
ILTHAHLDHSAFIPLLFKYGYDGPIYCTEPTRDLMGLLTLDYLDVAAKEGRAPPYDSEMV
REAIKHCIPLEYGDVTDIAPDVKLTFHNAGHILGSAVSHFHIGDGLYNVAFSGDIHYDDT
RLFNGAVNDFPRVETLVMESTYGGRNDYQTDQEDSERKLKRVINETYEDGGKVLIPAFAV
GRSQEMMLVLEEAMREGEIPEMPIHLDGMIWEATAIHTTYPEYLRDDLRDRIFHSDSNPF
LAPQFNHIDGGEEERQAVADDDQCIILSTSGMVSGGPIMSWLEHIAPDPDSTLTFVGYQA
QGTLGRRIQSGRDKIPMPDSRSGGRTEHLQLNMGVETVDGFSGHADRQGLEDFVRTMNPR
PEKVLCVHGDESSTQDLSSALYHEFNMRTFAPKNLETFRFV
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgtagaccgtcaacttgaggagttacaggacgaaatcgtcagcgaaattccg
gcggacatctcggtcaccgatgtcaaatacgaaggccccgagctcgtcgtctacacccgg
gaccccaaacagttcgcacaggacggcgacctcgttcgccggctggcgtccaagctccgg
aagcgcatcaccgtgcggccggacccggcggtactctccagcccgaagcgcgcccgcgac
cgcgtcctcgacgtgatccccgaggaggccggcgtcacgaacctggatttccacgaggac
accggcgaggtggtcatcgaagccgagaagcccggcatggtgatcggccgccacggctcc
acgttgcgggagatcacacaggaagccgggtggactccggaggtcgtgcgcacgcccccg
atcgagtcctcgacggtctcgaacgtccggaacttcctcaaacaggagcgcgacgagcgc
cgcgacatcctcgaaacggtcggacgccagatccaccgtgaggagatgcaggacgacgag
tacgtgcgcgtgacgaccctggggtgctgtcgcgaggtcgggcgcgccagcttcgtgctt
tcgacgccggaaacgcggattctcgtcgactgcggggacaaacccggcagcgaggacgaa
gtcccgtatctgcaggtccaggaggcgctggcgggcggcgcgaacacgatcgacgccgtg
attttgacccacgcccacctcgaccactcggcgttcattccgctgctgttcaagtacggc
tacgacggcccgatctactgcacggagccgacccgggacctcatgggtctgttgaccctg
gactacttggacgtggccgcgaaggaggggcgggcaccgccgtacgactccgagatggtg
cgggaagcgatcaagcactgcatccccctggagtacggcgatgtcactgacatcgcgccg
gacgtgaaactcacgttccacaacgccggtcacatcctcgggtcggccgtctcccatttc
cacatcggggacggcctctacaacgtcgcgttctccggggacattcactacgacgacacc
cgactgttcaacggcgctgtcaacgacttcccgcgcgtggagacgctcgtgatggagtcc
acgtacggcggccgcaacgactaccagaccgaccaggaggactccgagcgcaaactcaaa
cgcgtcatcaacgagacctacgaggacggcggcaaggtcctcattccggcgttcgccgtc
ggccggtcccaggagatgatgctcgtgctcgaagaggcgatgcgggagggcgagatcccc
gagatgcccatccacctcgacggcatgatctgggaggccactgccatccacaccacctac
cccgagtacctccgggacgacctccgggatcgcatcttccacagcgactccaatccgttc
ctcgcgccccagttcaaccacatcgacggcggcgaggaggaacggcaagcggtcgccgac
gacgaccagtgtatcatcctctcgacgtcggggatggtctccggcggccccatcatgtcg
tggctcgaacacatcgcgccggaccccgattcgacgctgacgttcgtcggctaccaggcc
cagggcacgcttggccgccgcattcagtccgggcgggacaagatcccgatgcccgactct
cggagcggcggccgcaccgagcacctccaactcaacatgggcgtcgaaaccgtcgacggc
ttctccggacacgccgaccgccagggcctcgaagacttcgtgcgcacgatgaacccccgg
ccggagaaagtgctgtgcgtccacggcgacgagtcctccacacaggacctctcgtcggcg
ctgtaccacgagttcaacatgcggacgttcgcgccgaagaacctcgaaacgttccggttc
gtgtag
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